| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is flbA [H]
Identifier: 146337788
GI number: 146337788
Start: 694649
End: 696790
Strand: Direct
Name: flbA [H]
Synonym: BRADO0666
Alternate gene names: 146337788
Gene position: 694649-696790 (Clockwise)
Preceding gene: 146337786
Following gene: 146337790
Centisome position: 9.32
GC content: 70.54
Gene sequence:
>2142_bases TTGCATCCGAGTGCGAGAGACGGAGACATCATGGGCGCTGTGGCTGTCGAGCGGCTGCTGATCGAGGCGGCGGATCACTA TAATGCCGGAAGGCCCTTACCCGCGCAGTCGCTGTGCGCGAAGATCCTCCACAATGAGCCCGATCACCTGCCGGCGCTGC ACTTGTCTGCGATCCTCGCCTTTGCCGATGGCCGCATGGCGGAGGGCGCAGCGCTGCTCGGCCGCGTCTTCGCGTGCGAT CCCAACCACGCGCCGGCCTATGTGACGCTCGGCGACGCGCTCGCCGTGAAGGGTGAGCATGAGGGTGCCGCCGATGCATT TGGGCGGGCTGCAGCGCTGCGGCCGCGCGACGCCGTCATCCACGACAAGCTCGGCACCGCGTGGCTGGCCTTGTCTCGCC TGGCCGCGGCCGAGACTGCCTATCGTCAGGCCCTGGCGCTCGATCCCGCACTGCTCGGCGCGCACTGGAATCTCGCGTTG GCGCTGAGCCGGCAAGGCCGCCTCGATGAGGCCGAGGCCGCCTATCGCGAGCTGCTCGCGCGCGATCCGGCCTTTCCCGG CGCCTGGCGCGCGCTGGCCCATGTGCTCGCCGAATTCCCCCGGCGCGATGAGGCCGCGGCGGCCTATCGGCACGCTCTGG CAGCCGATCCGGACGATGCCGGGCTGCATCTCGGCCTCGGTGATGTGCTGCTCGCCCAAGGCGTCTTCAACGATGCCGCG CTTCACTATCGCCGCGCCTGCCAGCTGATGCCAGATGATGCCGAGGCCGCGCGGCAGCTCGGCCACGCGCTGCATCAGGC GGGACGGGCGTCAGAGGCGATCGAGGCCTATCGTCGCGCGGCCCTGCTCGACCCGACCAATGTCGTCTTGCTCAGCAATC TCGCCGCCTGCCTATACGGTCTCGGGCAACTCGAGGCCGCCCTCGCCGCGTGCAGGAATGCGCTGGCGCTGCAGCCGGGC TACGCGCCGGCGCACACCAATCTCGGCATCATTCACGAACGGCGCGGCGCCATGGATGAGGCCGTGGCTGCGCATCGCCG CGCCATCGCTGCCGATCCTTCCTATGCCCGCGGCCACGCCAATCTCGCGGTGGCGCTGCGCCATGCCGGCGACATCGATG CGGCGCTCGCGGCCTCGCACCAGGCCGTTGCGCTCGCGCCCGACGACGCGCAGACGCGGTACAATCACGCCCATGTTCTC TTGCTGTGCGGCGACCTCGTGGCGGGCTTCGCCGAGCACCGCTGGGGCCGCCACTGTCCGGAGCTGTCCGCGGGCATGCC GCGCTTCGATGCGCCGGACTGGAACGGCGAGCCGCTCGGCGGCCGCACGCTGCTGCTGTTCGCCGAATACGGTATCGGCG ATGCCTTGCAGTTCGTGCGCTACATCCCGCGCGTGCGCGCCATGGGCAGCAGCGTCGTGCTGCAGGTGCAGCCGGCGATC GCGCCGCTGCTGCGCGGCCTCGACGGCGTCACCGTGGTGGCGCGCGGCGAGCCGTTGCCGCCGTTCGATCTGCAGCTGCC GCTGATGGATCTGCCGCACATCTTCGGCACCACGCTGGAGACGATCCCGGCCGACGTGCCCTATCTCGCCGCCGATCCCA TCCAGGTCGCCGCCTGGCGCAACGTGCTCGGACGCGCGCCCGCGCTGAAGGTCGGCGTGGTCTGGGCGGGCAATGTCAGG CACAAGGGCGACCATCAGCGCTCGCTCGCGGCCAGGGATGTGCTGCCGCGGCTCCTAACGTCGGGCGTGCAGCTCTATTC GCTGCAGAAGGAGCCGCGTCCCGATGATGCACCGGCGCTGCTCGATCTCGCCACTGAGGTCATCGACCTCGCACCGCTGC TGACCGACTTTGCGGAAACTGCCGCCGCCGTCACCGCGCTCGACCTCGTGATCTCCGTCGACACCTCGGTCGCCCATCTC GCCGGCGCGCTGGCGCGGCCCGTGTGGGTGCTGCTGCCCCACGCCCAGGACTGGCGCTGGCTGCGCGACCGCGAAGACAC TCCGTGGTACCCGACCATGCGCTTGTTCAGGCAGGAGCGGCCGATGGCCTGGAACGGCGTGCTGATGCGGGCGTCGGACG AACTGGCGCGCGTGGCGGCGGGGGAGCGCGGACGATTGGCGCCGGGCGTCTCCGAGTCGTAA
Upstream 100 bases:
>100_bases CGAACTTGGTTGTGTCTGCAGATATTCGCCTGATGAACAGCCGTTAGCATTGATGAGGGCTCGCTGCCCCGCCTGAAACT GGCGTACCCGCCGTTGAAGC
Downstream 100 bases:
>100_bases TCGACCCTTTGTCCAAGCCCTCGATGTCGTCCCGGCCTTGAGCCGGGACCCATAACCACCGGCCGCTGTTTGGCGAAGAA CGACACTAAGTGTGCCCCAC
Product: TPR repeat-containing UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 713; Mature: 713
Protein sequence:
>713_residues MHPSARDGDIMGAVAVERLLIEAADHYNAGRPLPAQSLCAKILHNEPDHLPALHLSAILAFADGRMAEGAALLGRVFACD PNHAPAYVTLGDALAVKGEHEGAADAFGRAAALRPRDAVIHDKLGTAWLALSRLAAAETAYRQALALDPALLGAHWNLAL ALSRQGRLDEAEAAYRELLARDPAFPGAWRALAHVLAEFPRRDEAAAAYRHALAADPDDAGLHLGLGDVLLAQGVFNDAA LHYRRACQLMPDDAEAARQLGHALHQAGRASEAIEAYRRAALLDPTNVVLLSNLAACLYGLGQLEAALAACRNALALQPG YAPAHTNLGIIHERRGAMDEAVAAHRRAIAADPSYARGHANLAVALRHAGDIDAALAASHQAVALAPDDAQTRYNHAHVL LLCGDLVAGFAEHRWGRHCPELSAGMPRFDAPDWNGEPLGGRTLLLFAEYGIGDALQFVRYIPRVRAMGSSVVLQVQPAI APLLRGLDGVTVVARGEPLPPFDLQLPLMDLPHIFGTTLETIPADVPYLAADPIQVAAWRNVLGRAPALKVGVVWAGNVR HKGDHQRSLAARDVLPRLLTSGVQLYSLQKEPRPDDAPALLDLATEVIDLAPLLTDFAETAAAVTALDLVISVDTSVAHL AGALARPVWVLLPHAQDWRWLRDREDTPWYPTMRLFRQERPMAWNGVLMRASDELARVAAGERGRLAPGVSES
Sequences:
>Translated_713_residues MHPSARDGDIMGAVAVERLLIEAADHYNAGRPLPAQSLCAKILHNEPDHLPALHLSAILAFADGRMAEGAALLGRVFACD PNHAPAYVTLGDALAVKGEHEGAADAFGRAAALRPRDAVIHDKLGTAWLALSRLAAAETAYRQALALDPALLGAHWNLAL ALSRQGRLDEAEAAYRELLARDPAFPGAWRALAHVLAEFPRRDEAAAAYRHALAADPDDAGLHLGLGDVLLAQGVFNDAA LHYRRACQLMPDDAEAARQLGHALHQAGRASEAIEAYRRAALLDPTNVVLLSNLAACLYGLGQLEAALAACRNALALQPG YAPAHTNLGIIHERRGAMDEAVAAHRRAIAADPSYARGHANLAVALRHAGDIDAALAASHQAVALAPDDAQTRYNHAHVL LLCGDLVAGFAEHRWGRHCPELSAGMPRFDAPDWNGEPLGGRTLLLFAEYGIGDALQFVRYIPRVRAMGSSVVLQVQPAI APLLRGLDGVTVVARGEPLPPFDLQLPLMDLPHIFGTTLETIPADVPYLAADPIQVAAWRNVLGRAPALKVGVVWAGNVR HKGDHQRSLAARDVLPRLLTSGVQLYSLQKEPRPDDAPALLDLATEVIDLAPLLTDFAETAAAVTALDLVISVDTSVAHL AGALARPVWVLLPHAQDWRWLRDREDTPWYPTMRLFRQERPMAWNGVLMRASDELARVAAGERGRLAPGVSES >Mature_713_residues MHPSARDGDIMGAVAVERLLIEAADHYNAGRPLPAQSLCAKILHNEPDHLPALHLSAILAFADGRMAEGAALLGRVFACD PNHAPAYVTLGDALAVKGEHEGAADAFGRAAALRPRDAVIHDKLGTAWLALSRLAAAETAYRQALALDPALLGAHWNLAL ALSRQGRLDEAEAAYRELLARDPAFPGAWRALAHVLAEFPRRDEAAAAYRHALAADPDDAGLHLGLGDVLLAQGVFNDAA LHYRRACQLMPDDAEAARQLGHALHQAGRASEAIEAYRRAALLDPTNVVLLSNLAACLYGLGQLEAALAACRNALALQPG YAPAHTNLGIIHERRGAMDEAVAAHRRAIAADPSYARGHANLAVALRHAGDIDAALAASHQAVALAPDDAQTRYNHAHVL LLCGDLVAGFAEHRWGRHCPELSAGMPRFDAPDWNGEPLGGRTLLLFAEYGIGDALQFVRYIPRVRAMGSSVVLQVQPAI APLLRGLDGVTVVARGEPLPPFDLQLPLMDLPHIFGTTLETIPADVPYLAADPIQVAAWRNVLGRAPALKVGVVWAGNVR HKGDHQRSLAARDVLPRLLTSGVQLYSLQKEPRPDDAPALLDLATEVIDLAPLLTDFAETAAAVTALDLVISVDTSVAHL AGALARPVWVLLPHAQDWRWLRDREDTPWYPTMRLFRQERPMAWNGVLMRASDELARVAAGERGRLAPGVSES
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 4 TPR repeats [H]
Homologues:
Organism=Homo sapiens, GI32307148, Length=422, Percent_Identity=28.6729857819905, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI32307150, Length=422, Percent_Identity=28.6729857819905, Blast_Score=155, Evalue=1e-37, Organism=Homo sapiens, GI301336134, Length=313, Percent_Identity=29.3929712460064, Blast_Score=103, Evalue=5e-22, Organism=Homo sapiens, GI83415184, Length=310, Percent_Identity=29.6774193548387, Blast_Score=103, Evalue=8e-22, Organism=Homo sapiens, GI118766330, Length=262, Percent_Identity=27.4809160305344, Blast_Score=86, Evalue=1e-16, Organism=Homo sapiens, GI118766328, Length=262, Percent_Identity=27.4809160305344, Blast_Score=85, Evalue=2e-16, Organism=Homo sapiens, GI224809432, Length=360, Percent_Identity=23.6111111111111, Blast_Score=77, Evalue=5e-14, Organism=Homo sapiens, GI167466177, Length=231, Percent_Identity=21.2121212121212, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI167466175, Length=231, Percent_Identity=21.2121212121212, Blast_Score=69, Evalue=1e-11, Organism=Homo sapiens, GI22749211, Length=278, Percent_Identity=24.8201438848921, Blast_Score=67, Evalue=5e-11, Organism=Caenorhabditis elegans, GI115532692, Length=319, Percent_Identity=30.4075235109718, Blast_Score=138, Evalue=9e-33, Organism=Caenorhabditis elegans, GI115532690, Length=319, Percent_Identity=30.4075235109718, Blast_Score=138, Evalue=1e-32, Organism=Caenorhabditis elegans, GI25147174, Length=184, Percent_Identity=29.3478260869565, Blast_Score=90, Evalue=4e-18, Organism=Saccharomyces cerevisiae, GI6319387, Length=218, Percent_Identity=26.1467889908257, Blast_Score=82, Evalue=4e-16, Organism=Drosophila melanogaster, GI17647755, Length=351, Percent_Identity=29.0598290598291, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI24585827, Length=351, Percent_Identity=29.0598290598291, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI24585829, Length=351, Percent_Identity=29.0598290598291, Blast_Score=139, Evalue=6e-33, Organism=Drosophila melanogaster, GI281364285, Length=328, Percent_Identity=32.6219512195122, Blast_Score=102, Evalue=9e-22, Organism=Drosophila melanogaster, GI24581187, Length=328, Percent_Identity=32.6219512195122, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI161076610, Length=326, Percent_Identity=30.3680981595092, Blast_Score=102, Evalue=1e-21, Organism=Drosophila melanogaster, GI19920486, Length=326, Percent_Identity=30.3680981595092, Blast_Score=101, Evalue=2e-21, Organism=Drosophila melanogaster, GI24647123, Length=244, Percent_Identity=28.2786885245902, Blast_Score=86, Evalue=1e-16, Organism=Drosophila melanogaster, GI24656717, Length=341, Percent_Identity=25.2199413489736, Blast_Score=80, Evalue=5e-15, Organism=Drosophila melanogaster, GI18110006, Length=341, Percent_Identity=25.2199413489736, Blast_Score=80, Evalue=5e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76380; Mature: 76380
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHPSARDGDIMGAVAVERLLIEAADHYNAGRPLPAQSLCAKILHNEPDHLPALHLSAILA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH FADGRMAEGAALLGRVFACDPNHAPAYVTLGDALAVKGEHEGAADAFGRAAALRPRDAVI HHCCCCCCCHHHHHHHEEECCCCCCEEEEECCEEEECCCCCCHHHHHHHHHCCCCCHHHH HDKLGTAWLALSRLAAAETAYRQALALDPALLGAHWNLALALSRQGRLDEAEAAYRELLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH RDPAFPGAWRALAHVLAEFPRRDEAAAAYRHALAADPDDAGLHLGLGDVLLAQGVFNDAA CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHH LHYRRACQLMPDDAEAARQLGHALHQAGRASEAIEAYRRAALLDPTNVVLLSNLAACLYG HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LGQLEAALAACRNALALQPGYAPAHTNLGIIHERRGAMDEAVAAHRRAIAADPSYARGHA HHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEHHCCCHHHHHHHHHHHHCCCCCCCCCCC NLAVALRHAGDIDAALAASHQAVALAPDDAQTRYNHAHVLLLCGDLVAGFAEHRWGRHCP CEEEEEECCCCCHHHHHCCCCEEEECCCCHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCC ELSAGMPRFDAPDWNGEPLGGRTLLLFAEYGIGDALQFVRYIPRVRAMGSSVVLQVQPAI HHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECHHH APLLRGLDGVTVVARGEPLPPFDLQLPLMDLPHIFGTTLETIPADVPYLAADPIQVAAWR HHHHCCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHCHHHHCCCCCCCCCCCCHHHHHHH NVLGRAPALKVGVVWAGNVRHKGDHQRSLAARDVLPRLLTSGVQLYSLQKEPRPDDAPAL HHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH LDLATEVIDLAPLLTDFAETAAAVTALDLVISVDTSVAHLAGALARPVWVLLPHAQDWRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCHH LRDREDTPWYPTMRLFRQERPMAWNGVLMRASDELARVAAGERGRLAPGVSES HHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MHPSARDGDIMGAVAVERLLIEAADHYNAGRPLPAQSLCAKILHNEPDHLPALHLSAILA CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHHH FADGRMAEGAALLGRVFACDPNHAPAYVTLGDALAVKGEHEGAADAFGRAAALRPRDAVI HHCCCCCCCHHHHHHHEEECCCCCCEEEEECCEEEECCCCCCHHHHHHHHHCCCCCHHHH HDKLGTAWLALSRLAAAETAYRQALALDPALLGAHWNLALALSRQGRLDEAEAAYRELLA HHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHH RDPAFPGAWRALAHVLAEFPRRDEAAAAYRHALAADPDDAGLHLGLGDVLLAQGVFNDAA CCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEECHHHHHHHHHHHHHHH LHYRRACQLMPDDAEAARQLGHALHQAGRASEAIEAYRRAALLDPTNVVLLSNLAACLYG HHHHHHHCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH LGQLEAALAACRNALALQPGYAPAHTNLGIIHERRGAMDEAVAAHRRAIAADPSYARGHA HHHHHHHHHHHHHHHEECCCCCCCCCCCCEEEHHCCCHHHHHHHHHHHHCCCCCCCCCCC NLAVALRHAGDIDAALAASHQAVALAPDDAQTRYNHAHVLLLCGDLVAGFAEHRWGRHCP CEEEEEECCCCCHHHHHCCCCEEEECCCCHHHHHCCCEEEEEHHHHHHHHHHHHCCCCCC ELSAGMPRFDAPDWNGEPLGGRTLLLFAEYGIGDALQFVRYIPRVRAMGSSVVLQVQPAI HHHCCCCCCCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCEEEEECHHH APLLRGLDGVTVVARGEPLPPFDLQLPLMDLPHIFGTTLETIPADVPYLAADPIQVAAWR HHHHCCCCCEEEEECCCCCCCCCCCCCHHHCCHHHHCHHHHCCCCCCCCCCCCHHHHHHH NVLGRAPALKVGVVWAGNVRHKGDHQRSLAARDVLPRLLTSGVQLYSLQKEPRPDDAPAL HHHCCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHH LDLATEVIDLAPLLTDFAETAAAVTALDLVISVDTSVAHLAGALARPVWVLLPHAQDWRW HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEEECCCCCCHH LRDREDTPWYPTMRLFRQERPMAWNGVLMRASDELARVAAGERGRLAPGVSES HHCCCCCCCCHHHHHHHHCCCCCCCCEEEECCHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9748431; 11259647; 1699845 [H]