| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337785
Identifier: 146337785
GI number: 146337785
Start: 687163
End: 688317
Strand: Reverse
Name: 146337785
Synonym: BRADO0663
Alternate gene names: NA
Gene position: 688317-687163 (Counterclockwise)
Preceding gene: 146337787
Following gene: 146337784
Centisome position: 9.23
GC content: 70.74
Gene sequence:
>1155_bases ATGCTTGCGGATATCGAGGTCAGCAGCAGCCAGGACCACCCGACAGCCGACACCGGGCCCAGCCCGGACGGCACCGCCGA GATCGGTCCGATCGTGATCGGCAGCGGTGGCGCCGAATCGGCCTCCGGCGGAAGCGCGGTGCAAATTGCCGAGATCGCCG TCAACCTGTCCGATCCCGGCACCGGGAGCCCATCGGAAGATACGGCCGGCGACCTGCATCCCAATCCCTATGGCAGCGAT GGCAGCGACGAGCATCCTTATAGCGGCGGCGACGCTGGCGGCGTGTGCAGCGCCGGAGACCTGCACGACAATCCCTATGG CAATCCGGACCAGGGTGGCGAGGAGCTGCCGGCCAATCCTTACGGCGAAGGCGGCGGCACCGACAATGCGCCGGAGTTGC CGCCCAACCCCTATGGTGACGAAGGCGGCGACCTGCATCCGAGCCCCTATGAAGGCGATGGCGGCCAGGGCGGAGGAAAT GGCGGCACTGGCGACGGCGGCAGCAATGGCGGTGGCGGCGGCGATTCCGGAGGCGAAGGCGGCGGCGGCGAAGGCGGCGG GGGCGAAGGTGGGGGCGGTGGTGAGGGCACGCCTGACCCGGACGGGACCGGCGAGAGCGGCGAAGGCGGTCATCTCGGAG CCGGCGGCCACGCCGGTGGTCATGACGGCGCAGGCCTTGCCGGAGGTGAAGCCGGGCTGTCCGGCGACGTCATCGGTCAC TTCGGCGGCGAATCCCACGGCGAGGGCACCGGCCCGCTGCACGATCCTGGCGAGGAGCGGCCAAATCCGGACGACAGCGG CGCTGGCGGTCCGGCGGGCGCTTCGGGCCATCTGCAGGAGAACGGCTTCTGGGCGCAGGCGGCGTCGGCCGCGCAGGGCA CAGCCGCGGGCGATCAGATCAGCGCTGCCGAGATCAGCCATCTCGATGTGACCGCTTTCCAGGTGGCGCATGCGGGCGCG ATCGAGGACCCGGCCGGCGCCCATGACGGCAGCCATGATGGGCTGCTCGACGATGTCGCGCACGGCACGATGCATGCGGA TGTGCTCGGTCACGACGCCGCGGCCGGCTTCGCCCACGCCGATCTCGGCTCCGCCGCCTTGCATTCCGCCGCCGAGCTGG CCGGCGGCCATTTCGCCAACCAGATGCACATCTGA
Upstream 100 bases:
>100_bases CGGATGGGGTCGCGTGATTTGCGTCACATCTCCCGGGAACCGCCAGGATCATGGTTCGCGCCGTGATCTGAGAGGACAAA AGAGGCGCGCCATGCCCGTG
Downstream 100 bases:
>100_bases CCGGCTGTGATCGCCGCGGAACATCGCGATCACAGCCCCGTTGGCGGGGGCGGTTTGACTATCCGGCAGGCGGGCGATGG TCTAAGAGAACGGCGCCGAT
Product: RTX toxin/Ca2+-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 384; Mature: 384
Protein sequence:
>384_residues MLADIEVSSSQDHPTADTGPSPDGTAEIGPIVIGSGGAESASGGSAVQIAEIAVNLSDPGTGSPSEDTAGDLHPNPYGSD GSDEHPYSGGDAGGVCSAGDLHDNPYGNPDQGGEELPANPYGEGGGTDNAPELPPNPYGDEGGDLHPSPYEGDGGQGGGN GGTGDGGSNGGGGGDSGGEGGGGEGGGGEGGGGGEGTPDPDGTGESGEGGHLGAGGHAGGHDGAGLAGGEAGLSGDVIGH FGGESHGEGTGPLHDPGEERPNPDDSGAGGPAGASGHLQENGFWAQAASAAQGTAAGDQISAAEISHLDVTAFQVAHAGA IEDPAGAHDGSHDGLLDDVAHGTMHADVLGHDAAAGFAHADLGSAALHSAAELAGGHFANQMHI
Sequences:
>Translated_384_residues MLADIEVSSSQDHPTADTGPSPDGTAEIGPIVIGSGGAESASGGSAVQIAEIAVNLSDPGTGSPSEDTAGDLHPNPYGSD GSDEHPYSGGDAGGVCSAGDLHDNPYGNPDQGGEELPANPYGEGGGTDNAPELPPNPYGDEGGDLHPSPYEGDGGQGGGN GGTGDGGSNGGGGGDSGGEGGGGEGGGGEGGGGGEGTPDPDGTGESGEGGHLGAGGHAGGHDGAGLAGGEAGLSGDVIGH FGGESHGEGTGPLHDPGEERPNPDDSGAGGPAGASGHLQENGFWAQAASAAQGTAAGDQISAAEISHLDVTAFQVAHAGA IEDPAGAHDGSHDGLLDDVAHGTMHADVLGHDAAAGFAHADLGSAALHSAAELAGGHFANQMHI >Mature_384_residues MLADIEVSSSQDHPTADTGPSPDGTAEIGPIVIGSGGAESASGGSAVQIAEIAVNLSDPGTGSPSEDTAGDLHPNPYGSD GSDEHPYSGGDAGGVCSAGDLHDNPYGNPDQGGEELPANPYGEGGGTDNAPELPPNPYGDEGGDLHPSPYEGDGGQGGGN GGTGDGGSNGGGGGDSGGEGGGGEGGGGEGGGGGEGTPDPDGTGESGEGGHLGAGGHAGGHDGAGLAGGEAGLSGDVIGH FGGESHGEGTGPLHDPGEERPNPDDSGAGGPAGASGHLQENGFWAQAASAAQGTAAGDQISAAEISHLDVTAFQVAHAGA IEDPAGAHDGSHDGLLDDVAHGTMHADVLGHDAAAGFAHADLGSAALHSAAELAGGHFANQMHI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36099; Mature: 36099
Theoretical pI: Translated: 3.78; Mature: 3.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLADIEVSSSQDHPTADTGPSPDGTAEIGPIVIGSGGAESASGGSAVQIAEIAVNLSDPG CCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCCCC TGSPSEDTAGDLHPNPYGSDGSDEHPYSGGDAGGVCSAGDLHDNPYGNPDQGGEELPANP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGEGGGTDNAPELPPNPYGDEGGDLHPSPYEGDGGQGGGNGGTGDGGSNGGGGGDSGGEG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGEGGGGEGGGGGEGTPDPDGTGESGEGGHLGAGGHAGGHDGAGLAGGEAGLSGDVIGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC FGGESHGEGTGPLHDPGEERPNPDDSGAGGPAGASGHLQENGFWAQAASAAQGTAAGDQI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC SAAEISHLDVTAFQVAHAGAIEDPAGAHDGSHDGLLDDVAHGTMHADVLGHDAAAGFAHA CHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCEEHHHHCCHHHCCHHHH DLGSAALHSAAELAGGHFANQMHI HHHHHHHHHHHHHHCCCCHHCCCC >Mature Secondary Structure MLADIEVSSSQDHPTADTGPSPDGTAEIGPIVIGSGGAESASGGSAVQIAEIAVNLSDPG CCCCEECCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCEEEEEEEEEECCCCC TGSPSEDTAGDLHPNPYGSDGSDEHPYSGGDAGGVCSAGDLHDNPYGNPDQGGEELPANP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGEGGGTDNAPELPPNPYGDEGGDLHPSPYEGDGGQGGGNGGTGDGGSNGGGGGDSGGEG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GGGEGGGGEGGGGGEGTPDPDGTGESGEGGHLGAGGHAGGHDGAGLAGGEAGLSGDVIGH CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEC FGGESHGEGTGPLHDPGEERPNPDDSGAGGPAGASGHLQENGFWAQAASAAQGTAAGDQI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCC SAAEISHLDVTAFQVAHAGAIEDPAGAHDGSHDGLLDDVAHGTMHADVLGHDAAAGFAHA CHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHCCEEHHHHCCHHHCCHHHH DLGSAALHSAAELAGGHFANQMHI HHHHHHHHHHHHHHCCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA