| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146337767
Identifier: 146337767
GI number: 146337767
Start: 667479
End: 668204
Strand: Reverse
Name: 146337767
Synonym: BRADO0644
Alternate gene names: NA
Gene position: 668204-667479 (Counterclockwise)
Preceding gene: 146337771
Following gene: 146337766
Centisome position: 8.96
GC content: 65.15
Gene sequence:
>726_bases GTGACGGCATCGACGGGCCTTGGCGCTCCCTGCACGTTCGCCGAGCTTGGCGACGGTCATGTCAGCGAGATCGTCGATGC GCGCAGCGTGCGCCTGAGCGATGGCCGCGAGATCCGGCTCGCCGGCATCGAGGCGCCAGCGCCCGAGCATCGCGCGGCGG CGACGGACGCGCTCGTCGCGCTGCTGCGCGACCGCGACATCGTGCTGCGCGGCGACGATGACGCACCGGACCGCTACGGC CGGCAGCGCGCCTTCGCCTTCGTCGCCGGTGCCGACCAATCCGCCCAGAGCGAACTGCTGCGGCAGGGCGCCGTGCTCCG CGGCATCGACCTGCCTGACCGCGACTGCGCCCTCAGCCTGGCTGCGGCGGAGACCGAGGCGCGGGCTGCGCGACGGGGGC TCTGGAATATGGGGACCGTCATAAAAAACGCTGAAAGTCCAGACGATATTTTGGCTGGCGTAGGGCTATTTACGGTTGTC GAAGGGAAGGTGTTGTCCGTACGACAGGCAGGGACAACGACCTATCTGAACTTCGCTCGTAACTGGACACGGGGCTTCGC TGTGATTATTCCAAAGCGTATGATGGCGGTATTGGAAGGTGCCGGCATCGACGTCAAATCACTTGCGAATCGGCAGGTTC GGGTGCGCGGTTGGATTGAAGCGCATGCGGGTCCGAGGCTGGAACTGACGCAGAGCGCGCAGATTGAGATTTTGAGCGGC AATTGA
Upstream 100 bases:
>100_bases ATGATGCGGCATGGCGCGTGCACGCATGATGATCTGCAGACCAAGGCTCGCCGGCGTGACGCCGGTTGCGACGGCCATCG CGGCATCGGCCGTCGTGGTC
Downstream 100 bases:
>100_bases CCGCTGAGGGTACGTGAGTAGCGACGTGGACCTGTCTGTTCGAAGGCGCATGTTGGTAGTGAACTGCGGTTCGCGGATCG CACCGGCGTTGCTGTGCCTG
Product: hypothetical protein
Products: NA
Alternate protein names: SNase-Like Nuclease; Nuclease SNase-Like
Number of amino acids: Translated: 241; Mature: 240
Protein sequence:
>241_residues MTASTGLGAPCTFAELGDGHVSEIVDARSVRLSDGREIRLAGIEAPAPEHRAAATDALVALLRDRDIVLRGDDDAPDRYG RQRAFAFVAGADQSAQSELLRQGAVLRGIDLPDRDCALSLAAAETEARAARRGLWNMGTVIKNAESPDDILAGVGLFTVV EGKVLSVRQAGTTTYLNFARNWTRGFAVIIPKRMMAVLEGAGIDVKSLANRQVRVRGWIEAHAGPRLELTQSAQIEILSG N
Sequences:
>Translated_241_residues MTASTGLGAPCTFAELGDGHVSEIVDARSVRLSDGREIRLAGIEAPAPEHRAAATDALVALLRDRDIVLRGDDDAPDRYG RQRAFAFVAGADQSAQSELLRQGAVLRGIDLPDRDCALSLAAAETEARAARRGLWNMGTVIKNAESPDDILAGVGLFTVV EGKVLSVRQAGTTTYLNFARNWTRGFAVIIPKRMMAVLEGAGIDVKSLANRQVRVRGWIEAHAGPRLELTQSAQIEILSG N >Mature_240_residues TASTGLGAPCTFAELGDGHVSEIVDARSVRLSDGREIRLAGIEAPAPEHRAAATDALVALLRDRDIVLRGDDDAPDRYGR QRAFAFVAGADQSAQSELLRQGAVLRGIDLPDRDCALSLAAAETEARAARRGLWNMGTVIKNAESPDDILAGVGLFTVVE GKVLSVRQAGTTTYLNFARNWTRGFAVIIPKRMMAVLEGAGIDVKSLANRQVRVRGWIEAHAGPRLELTQSAQIEILSGN
Specific function: Unknown
COG id: COG1525
COG function: function code L; Micrococcal nuclease (thermonuclease) homologs
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25769; Mature: 25637
Theoretical pI: Translated: 6.29; Mature: 6.29
Prosite motif: PS50830 TNASE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASTGLGAPCTFAELGDGHVSEIVDARSVRLSDGREIRLAGIEAPAPEHRAAATDALVA CCCCCCCCCCEEHHHCCCCHHHHHHHHHCEEECCCCEEEEEECCCCCCCHHHHHHHHHHH LLRDRDIVLRGDDDAPDRYGRQRAFAFVAGADQSAQSELLRQGAVLRGIDLPDRDCALSL HHCCCCEEEECCCCCCHHHCCCEEEEEEECCCCHHHHHHHHCCCEEECCCCCCHHHEEEE AAAETEARAARRGLWNMGTVIKNAESPDDILAGVGLFTVVEGKVLSVRQAGTTTYLNFAR HHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCEEHHHHH NWTRGFAVIIPKRMMAVLEGAGIDVKSLANRQVRVRGWIEAHAGPRLELTQSAQIEILSG HHCCCEEEEEHHHHHHHHHCCCCCHHHHCCCEEEEEEEEEECCCCCEEEECCCEEEEEEC N C >Mature Secondary Structure TASTGLGAPCTFAELGDGHVSEIVDARSVRLSDGREIRLAGIEAPAPEHRAAATDALVA CCCCCCCCCEEHHHCCCCHHHHHHHHHCEEECCCCEEEEEECCCCCCCHHHHHHHHHHH LLRDRDIVLRGDDDAPDRYGRQRAFAFVAGADQSAQSELLRQGAVLRGIDLPDRDCALSL HHCCCCEEEECCCCCCHHHCCCEEEEEEECCCCHHHHHHHHCCCEEECCCCCCHHHEEEE AAAETEARAARRGLWNMGTVIKNAESPDDILAGVGLFTVVEGKVLSVRQAGTTTYLNFAR HHHHHHHHHHHHCCHHHHHHHCCCCCHHHHHHHHHHHEEECCCEEEEECCCCCEEHHHHH NWTRGFAVIIPKRMMAVLEGAGIDVKSLANRQVRVRGWIEAHAGPRLELTQSAQIEILSG HHCCCEEEEEHHHHHHHHHCCCCCHHHHCCCEEEEEEEEEECCCCCEEEECCCEEEEEEC N C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA