| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is limB [H]
Identifier: 146337748
GI number: 146337748
Start: 646685
End: 647785
Strand: Direct
Name: limB [H]
Synonym: BRADO0622
Alternate gene names: 146337748
Gene position: 646685-647785 (Clockwise)
Preceding gene: 146337747
Following gene: 146337749
Centisome position: 8.67
GC content: 63.67
Gene sequence:
>1101_bases ATGGAAATCGGATACTTCACGATGCCCTCGCATCCGCCGGAGTGCGGATTGAAGGAAGGGCAGGAGTGGGACCTTCAGGT CCTGCGCTGGCTCGATGAGCTCGGCTATCAGGAAGCCTGGATCGGCGAGCATCACACCGCGCCATGGGAGCCGCATCCCG CGCCCGATCTGATTTTGGCGCAGGCGTTCCGCGAGACCAAGAACATCCGCCTCGGCCCCGGCGGCTTCCTGCTGCCCTAT CATCATCCGGCCGAGCTCGCCAACCGCGTCGCGATGCTGGATCATCTCTCCGACGGCCGGCTCAATTTCGGCATTGCCGC ATCCGGCCTGCCGAGCGACTGGGCGATGTTCAATGTCGACGGCATTAGCGGCCAGAACCGCGAGATGACGCGCGAGGCGC TGGAGATCATCCTGCGGCTATGGACCGAGCCGGCGCCGTTCACGCACAAGGGCAAGTACTGGACGGTGACCAAGCCTGAC GTGATGTTTGACTTCCTGAAGCCGCATATCAAGCCGGTGCAGGCGCCGCATCCGCCGATCGGCGTCGCAGGTCTGTCGAA GAACTCCGATACGCTCAAGCTCGCCGGCGAGCGCGGCTTCATTCCGATGAGTCTCAATCTCAACCCCGCCTATGTGTCGT CGCACTGGGATTCGGTCGAGGCCGGCGCCGCCAAGTCCGGGCGCAAGCCGAGCCGCAACGATTGGCGGCTGGTCCGCGAG GTGTTCGTCGCCGAGACCGATGAGGAGGCGTGGCGGCTCTCGACCGGCGACATGATGGGCCGGATGATGGGCGAGTACTT CCTGCCGCTGCTGAGCCATTTCGGCTTCAAGGACTACCTCAAGCATTCGCCCGACGTGCCGGATACCGACGTGACGGTGG ACTATTGCGCCAAGCGCAACTGGATCATCGGCTCGCCGGCGACGGTGACCGAGAAGATCGAGAAGATCTGGCACGAGGTC GGCGGCTTCGGGACGCTGTGCGTGTTCGGCTTCGACTACAAGCACAAGCCGGAAGCCTGGCACAACTCGCTGCGCCTCCT GAAGCACGAGGTGATGCCGAGGTTGCGCCATCTCAATGCCGATATGACCAGGGCGGCGTAA
Upstream 100 bases:
>100_bases CACGTGCGGCGTTGCCGACTCCGTTGGTCGTGTTTCGTCTCGCGTGACGATGAGCGCATCACAAAGGTGCGCCGCAGTAT AAACGCGAGAGGAAAGCGCC
Downstream 100 bases:
>100_bases TATCAGCGATCGGGCCGGCGCAGGTGCGCCGGTCCGATCGACGAGGTCATTGCCATGCGCATTCGCGTCCGACAGTCAGC CCATGTGCTCGAGCGGTCGG
Product: putative luciferase-like monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 366; Mature: 366
Protein sequence:
>366_residues MEIGYFTMPSHPPECGLKEGQEWDLQVLRWLDELGYQEAWIGEHHTAPWEPHPAPDLILAQAFRETKNIRLGPGGFLLPY HHPAELANRVAMLDHLSDGRLNFGIAASGLPSDWAMFNVDGISGQNREMTREALEIILRLWTEPAPFTHKGKYWTVTKPD VMFDFLKPHIKPVQAPHPPIGVAGLSKNSDTLKLAGERGFIPMSLNLNPAYVSSHWDSVEAGAAKSGRKPSRNDWRLVRE VFVAETDEEAWRLSTGDMMGRMMGEYFLPLLSHFGFKDYLKHSPDVPDTDVTVDYCAKRNWIIGSPATVTEKIEKIWHEV GGFGTLCVFGFDYKHKPEAWHNSLRLLKHEVMPRLRHLNADMTRAA
Sequences:
>Translated_366_residues MEIGYFTMPSHPPECGLKEGQEWDLQVLRWLDELGYQEAWIGEHHTAPWEPHPAPDLILAQAFRETKNIRLGPGGFLLPY HHPAELANRVAMLDHLSDGRLNFGIAASGLPSDWAMFNVDGISGQNREMTREALEIILRLWTEPAPFTHKGKYWTVTKPD VMFDFLKPHIKPVQAPHPPIGVAGLSKNSDTLKLAGERGFIPMSLNLNPAYVSSHWDSVEAGAAKSGRKPSRNDWRLVRE VFVAETDEEAWRLSTGDMMGRMMGEYFLPLLSHFGFKDYLKHSPDVPDTDVTVDYCAKRNWIIGSPATVTEKIEKIWHEV GGFGTLCVFGFDYKHKPEAWHNSLRLLKHEVMPRLRHLNADMTRAA >Mature_366_residues MEIGYFTMPSHPPECGLKEGQEWDLQVLRWLDELGYQEAWIGEHHTAPWEPHPAPDLILAQAFRETKNIRLGPGGFLLPY HHPAELANRVAMLDHLSDGRLNFGIAASGLPSDWAMFNVDGISGQNREMTREALEIILRLWTEPAPFTHKGKYWTVTKPD VMFDFLKPHIKPVQAPHPPIGVAGLSKNSDTLKLAGERGFIPMSLNLNPAYVSSHWDSVEAGAAKSGRKPSRNDWRLVRE VFVAETDEEAWRLSTGDMMGRMMGEYFLPLLSHFGFKDYLKHSPDVPDTDVTVDYCAKRNWIIGSPATVTEKIEKIWHEV GGFGTLCVFGFDYKHKPEAWHNSLRLLKHEVMPRLRHLNADMTRAA
Specific function: Acts on both enantiomers of limonene by their NAD- dependent epoxidation at the 1,2 double bond forming limonene-1,2- epoxide [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial luciferase oxidoreductase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011251 - InterPro: IPR016048 [H]
Pfam domain/function: PF00296 Bac_luciferase [H]
EC number: =1.14.13.107 [H]
Molecular weight: Translated: 41522; Mature: 41522
Theoretical pI: Translated: 6.60; Mature: 6.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIGYFTMPSHPPECGLKEGQEWDLQVLRWLDELGYQEAWIGEHHTAPWEPHPAPDLILA CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHH QAFRETKNIRLGPGGFLLPYHHPAELANRVAMLDHLSDGRLNFGIAASGLPSDWAMFNVD HHHHHHCCEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEC GISGQNREMTREALEIILRLWTEPAPFTHKGKYWTVTKPDVMFDFLKPHIKPVQAPHPPI CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCC GVAGLSKNSDTLKLAGERGFIPMSLNLNPAYVSSHWDSVEAGAAKSGRKPSRNDWRLVRE EEEECCCCCCEEEECCCCCEEEEEECCCHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHH VFVAETDEEAWRLSTGDMMGRMMGEYFLPLLSHFGFKDYLKHSPDVPDTDVTVDYCAKRN HHHHCCCCHHHEECHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHCCCC WIIGSPATVTEKIEKIWHEVGGFGTLCVFGFDYKHKPEAWHNSLRLLKHEVMPRLRHLNA EEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DMTRAA HHHHCC >Mature Secondary Structure MEIGYFTMPSHPPECGLKEGQEWDLQVLRWLDELGYQEAWIGEHHTAPWEPHPAPDLILA CCCCEECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCHHHHHH QAFRETKNIRLGPGGFLLPYHHPAELANRVAMLDHLSDGRLNFGIAASGLPSDWAMFNVD HHHHHHCCEEECCCCEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEC GISGQNREMTREALEIILRLWTEPAPFTHKGKYWTVTKPDVMFDFLKPHIKPVQAPHPPI CCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHHHHHHCCCCCCCCCCCCCC GVAGLSKNSDTLKLAGERGFIPMSLNLNPAYVSSHWDSVEAGAAKSGRKPSRNDWRLVRE EEEECCCCCCEEEECCCCCEEEEEECCCHHHHHCCCCCHHCCCCCCCCCCCCHHHHHHHH VFVAETDEEAWRLSTGDMMGRMMGEYFLPLLSHFGFKDYLKHSPDVPDTDVTVDYCAKRN HHHHCCCCHHHEECHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCCCCCCHHHHCCCC WIIGSPATVTEKIEKIWHEVGGFGTLCVFGFDYKHKPEAWHNSLRLLKHEVMPRLRHLNA EEECCCHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCC DMTRAA HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA