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The map label for this gene is yafK [H]

Identifier: 146337733

GI number: 146337733

Start: 628832

End: 630337

Strand: Reverse

Name: yafK [H]

Synonym: BRADO0605

Alternate gene names: 146337733

Gene position: 630337-628832 (Counterclockwise)

Preceding gene: 146337734

Following gene: 146337732

Centisome position: 8.45

GC content: 69.19

Gene sequence:

>1506_bases
GTGTCGCGGCATGCTGGGATTGCGGGGAGCTTCGCTTTGATCAACCGCGCTTTCGTCCGGGTCCTGATGACCTCGGCGGC
GTTGGCCGCCGGCGCGCTGCTGACCGGTTGCAACAGCGACCAGGTCGCGCTCGCCACCAGTGCCAAGGCCAACCAGCCCG
TCCCGCCCAAGCTCGTGGCGGCTATCGCCGAGAAGGACATGGACACGCAGTCGCCGATCCTGGTGCGCGTGTTCAAGCAG
GAGGCCGAGCTCGAGGTCTGGAAGCAGGATCGCTCCGGCAAGTTCGCGCTGCTCAAGACCTATCCGATCTGCCGCTGGTC
CGGCGATCTCGGCCCGAAGGTGCGTGAGGGCGACCGCCAGGCGCCGGAGGGCTTCTACTCGATCAATCCGAGCCAGATGA
ACCCGCAATCGGCGTATTATCTGTCGTTCAACACCGGCTATCCGAACGCGTTCGACAAGGCGCTGGGCCGCACCGGCTCG
CAGCTGATGGTGCATGGCGACTGCTCGTCGCGCGGCTGCTTCGCGATGACCGACGAGCAGATCGCCGAGATCTATGCGCT
GGGACGCGAGTCGTTCTTCGGCGGCCAGCGCGCCTTCCAGTTCCAGGCCTATCCGTTCCGGATGACGCCGGTGAACATGG
CGCGCCACCGCAACAACCCGAACATGCCGTTCTGGCGCATGATCAAGGAAGGTTACGACGCCTTCGAGGTGACCCGGCAG
GAGCCGAAGGTCGACTTCTGCGAGAAGAAATACGTCTTCAATGCTCAGAAGCCGCCTGGCGCGACCCGCGACCCGGTGTT
CGACGCCGCCGCCAAGTGCCCGGCCTATGTGGTGCCGGACGAGATCGCCTCGGCAGTGCGCGAGAAGCAGCAGGCGGACG
AGGCCGAATACGCCAAGCTGGTCGCCAAGGGCACGCCGGTGGCCAAGCTCAACACCGGCATCGACGGCGGCATGAACCCG
ATCTTCGCCAACCGCGTGCCGGGCGCCTCCACCGGCCTGTCCGACGCCGGCGAGGCGCCGGGCCTGTCGTTCGCCAACTT
CCAGCCCGCGCCGGGCACCATCCCCGGTCACGTCAACCCGCCGCGCGCACCGGGCGCCGACGAGGTCGCGGCGATGCCGG
CGAGTGCCCCGGAAGCTCCGGTGACGACCGCGCCGTCGACCCGCGTCGCCGCTGTCAGCGCGCCGGAGAAGCCGAGCTTC
ATGTCGAGCCTCGCCCGCAAGGTCGGCCTGGGCGGCAATGCCGAAACCACGGCGACCGCGAAGCCGGCCGAGAGCAAGAC
GGCGGAGGCGAAGCCCGCCGAGGCGAAGCCGGCGCCGAAGCCGGTTGCTGCCAAGCCGGCCGAGACCAAGCAGGCTGCCG
CCCGGCCGCCGTTCAAGCCCGCGACCGGCGACGCGCCGGCGACGACGTCCTCGGCTCCGGCGCAGACCCAGGCCGCCCTG
GTCTCCGGCGCCGCGCCGGTGCTGCAGTCGAACTCGTTCGACAGCCGGTTCGCCGGGTTCAAGTAG

Upstream 100 bases:

>100_bases
CAAAGTATACAATTTTAATCATTGGTTTGACGTGAGCATGACGCGCGATCGACCTGGGATCTGTCCAGCTTCCCGGTCGA
TGGACTAAGACAAGAGTGGG

Downstream 100 bases:

>100_bases
GCGGCGAGCGGGACACTGCGCGGCTTGCCGTCGCGGATTGCTTGATTTGCTAGCTCGCGTCCGACCGCACTTTGTCCAAC
CGCATTTTGTCGATGAGTCC

Product: putative exported protein transcriptiona regulatory protein at C-terminal

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 501; Mature: 500

Protein sequence:

>501_residues
MSRHAGIAGSFALINRAFVRVLMTSAALAAGALLTGCNSDQVALATSAKANQPVPPKLVAAIAEKDMDTQSPILVRVFKQ
EAELEVWKQDRSGKFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKALGRTGS
QLMVHGDCSSRGCFAMTDEQIAEIYALGRESFFGGQRAFQFQAYPFRMTPVNMARHRNNPNMPFWRMIKEGYDAFEVTRQ
EPKVDFCEKKYVFNAQKPPGATRDPVFDAAAKCPAYVVPDEIASAVREKQQADEAEYAKLVAKGTPVAKLNTGIDGGMNP
IFANRVPGASTGLSDAGEAPGLSFANFQPAPGTIPGHVNPPRAPGADEVAAMPASAPEAPVTTAPSTRVAAVSAPEKPSF
MSSLARKVGLGGNAETTATAKPAESKTAEAKPAEAKPAPKPVAAKPAETKQAAARPPFKPATGDAPATTSSAPAQTQAAL
VSGAAPVLQSNSFDSRFAGFK

Sequences:

>Translated_501_residues
MSRHAGIAGSFALINRAFVRVLMTSAALAAGALLTGCNSDQVALATSAKANQPVPPKLVAAIAEKDMDTQSPILVRVFKQ
EAELEVWKQDRSGKFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKALGRTGS
QLMVHGDCSSRGCFAMTDEQIAEIYALGRESFFGGQRAFQFQAYPFRMTPVNMARHRNNPNMPFWRMIKEGYDAFEVTRQ
EPKVDFCEKKYVFNAQKPPGATRDPVFDAAAKCPAYVVPDEIASAVREKQQADEAEYAKLVAKGTPVAKLNTGIDGGMNP
IFANRVPGASTGLSDAGEAPGLSFANFQPAPGTIPGHVNPPRAPGADEVAAMPASAPEAPVTTAPSTRVAAVSAPEKPSF
MSSLARKVGLGGNAETTATAKPAESKTAEAKPAEAKPAPKPVAAKPAETKQAAARPPFKPATGDAPATTSSAPAQTQAAL
VSGAAPVLQSNSFDSRFAGFK
>Mature_500_residues
SRHAGIAGSFALINRAFVRVLMTSAALAAGALLTGCNSDQVALATSAKANQPVPPKLVAAIAEKDMDTQSPILVRVFKQE
AELEVWKQDRSGKFALLKTYPICRWSGDLGPKVREGDRQAPEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKALGRTGSQ
LMVHGDCSSRGCFAMTDEQIAEIYALGRESFFGGQRAFQFQAYPFRMTPVNMARHRNNPNMPFWRMIKEGYDAFEVTRQE
PKVDFCEKKYVFNAQKPPGATRDPVFDAAAKCPAYVVPDEIASAVREKQQADEAEYAKLVAKGTPVAKLNTGIDGGMNPI
FANRVPGASTGLSDAGEAPGLSFANFQPAPGTIPGHVNPPRAPGADEVAAMPASAPEAPVTTAPSTRVAAVSAPEKPSFM
SSLARKVGLGGNAETTATAKPAESKTAEAKPAEAKPAPKPVAAKPAETKQAAARPPFKPATGDAPATTSSAPAQTQAALV
SGAAPVLQSNSFDSRFAGFK

Specific function: Unknown

COG id: COG3034

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the YkuD family [H]

Homologues:

Organism=Escherichia coli, GI1786418, Length=230, Percent_Identity=40.8695652173913, Blast_Score=185, Evalue=5e-48,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005490 [H]

Pfam domain/function: PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 52988; Mature: 52857

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHAGIAGSFALINRAFVRVLMTSAALAAGALLTGCNSDQVALATSAKANQPVPPKLVA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHH
AIAEKDMDTQSPILVRVFKQEAELEVWKQDRSGKFALLKTYPICRWSGDLGPKVREGDRQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCC
APEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCFAMTDEQ
CCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCEEEECHHH
IAEIYALGRESFFGGQRAFQFQAYPFRMTPVNMARHRNNPNMPFWRMIKEGYDAFEVTRQ
HHHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHHCCCCCCHHHHHHHHCCCHHHHHCC
EPKVDFCEKKYVFNAQKPPGATRDPVFDAAAKCPAYVVPDEIASAVREKQQADEAEYAKL
CCCCCHHHHHHEECCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHCCHHHHHHH
VAKGTPVAKLNTGIDGGMNPIFANRVPGASTGLSDAGEAPGLSFANFQPAPGTIPGHVNP
HHCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRAPGADEVAAMPASAPEAPVTTAPSTRVAAVSAPEKPSFMSSLARKVGLGGNAETTATA
CCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
KPAESKTAEAKPAEAKPAPKPVAAKPAETKQAAARPPFKPATGDAPATTSSAPAQTQAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
VSGAAPVLQSNSFDSRFAGFK
HHCCCHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SRHAGIAGSFALINRAFVRVLMTSAALAAGALLTGCNSDQVALATSAKANQPVPPKLVA
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCHHHHH
AIAEKDMDTQSPILVRVFKQEAELEVWKQDRSGKFALLKTYPICRWSGDLGPKVREGDRQ
HHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEECCEEEECCCCCCCCCCCCCC
APEGFYSINPSQMNPQSAYYLSFNTGYPNAFDKALGRTGSQLMVHGDCSSRGCFAMTDEQ
CCCCEEECCCCCCCCCCEEEEEEECCCCHHHHHHHCCCCCEEEEECCCCCCCEEEECHHH
IAEIYALGRESFFGGQRAFQFQAYPFRMTPVNMARHRNNPNMPFWRMIKEGYDAFEVTRQ
HHHHHHHHHHHHCCCCEEEEEECCCEEECCHHHHHHCCCCCCHHHHHHHHCCCHHHHHCC
EPKVDFCEKKYVFNAQKPPGATRDPVFDAAAKCPAYVVPDEIASAVREKQQADEAEYAKL
CCCCCHHHHHHEECCCCCCCCCCCCHHHHHHCCCCEECCHHHHHHHHHHHHCCHHHHHHH
VAKGTPVAKLNTGIDGGMNPIFANRVPGASTGLSDAGEAPGLSFANFQPAPGTIPGHVNP
HHCCCCCEEECCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PRAPGADEVAAMPASAPEAPVTTAPSTRVAAVSAPEKPSFMSSLARKVGLGGNAETTATA
CCCCCCCHHHCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCC
KPAESKTAEAKPAEAKPAPKPVAAKPAETKQAAARPPFKPATGDAPATTSSAPAQTQAAL
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHH
VSGAAPVLQSNSFDSRFAGFK
HHCCCHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]