| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is gloB [H]
Identifier: 146337699
GI number: 146337699
Start: 583041
End: 583808
Strand: Reverse
Name: gloB [H]
Synonym: BRADO0567
Alternate gene names: 146337699
Gene position: 583808-583041 (Counterclockwise)
Preceding gene: 146337701
Following gene: 146337698
Centisome position: 7.83
GC content: 65.36
Gene sequence:
>768_bases ATGGCCGCCGACATCCGCGTCTTCACCTGCCTGTCCGACAATTTCGGCTATCTGATCCACGATCCCGCAACTGGCGCCAC GGCCTCGGTCGACGCCCCCGAGGCGGGTCCGATCGTCCGGCAGCTGGAGGCCAACGGCTGGACGCTGACCGACATTCTGA TCACCCATCATCACTACGATCATGTCGGCGGCGTTGCCGAGTTGAAGCAGCGCTACGGCTGCCGCGTGATCGGGCCTCAT GACAGGAAGGCCGCCATCGCGGATGTCGACCTGCGCGTCGCCCATGGCGATGTCGTCAAGGTCGGCGAGCTCCTGGCGCG CGTGCTGGAGACGCCCGGCCACACGCTCGACCATGTGTCCTACGTGTTCGATGCCGACAAGGCGGTGTTCGCGGCCGATA CGCTGTTCTCGATCGGCTGCGGCCGCGTCTTCGAGGGAACCTATCCGATGATGTGGGATTCGCTGCTGAAGCTGCGAACC CTGCCCGACGATTTCAGGCTGTATTGCGGCCACGAATACACGGCGTCGAACGTCAAGTTCGCGCTCACCGTCGATCCGGA CAATGAGGCGCTGAAGGCGCGTGCCGCCGAGGTGACGCGGCTGCGCGCGGCGAATCAGCCCACCATCCCCGTGCTGCTCG GCGAGGAGAAGCAAGCCAACGTGTTTCTGCGCGCCGATGACCCGGCGATCGCCGTGCGGCTCCGCATGAAGGGAGCGAGC GCCGAGGAGGTGTTCGGCGAGCTGCGCGAGCGCAAGAACAAGTCGTAA
Upstream 100 bases:
>100_bases AGGCCGCCCGCGACGCTGCGCCCCGGGCCCGGTCTCTCAGCCAGATCTGACATCACGCGCAGCGCGTTCGTGCCGCGCCG GTACCGCCGACGGAGACATC
Downstream 100 bases:
>100_bases GCCCGCGGATCACGATCATGACCACGCTCCTCGCCGCCGACATCATCGCCCGTCTCGGCCTGCAGCCGCATCCGGAGGGT GGTCACTTCCGCGAGACGTT
Product: putative hydroxyacylglutathione hydrolase (glyoxalase II)
Products: NA
Alternate protein names: Glyoxalase II; Glx II [H]
Number of amino acids: Translated: 255; Mature: 254
Protein sequence:
>255_residues MAADIRVFTCLSDNFGYLIHDPATGATASVDAPEAGPIVRQLEANGWTLTDILITHHHYDHVGGVAELKQRYGCRVIGPH DRKAAIADVDLRVAHGDVVKVGELLARVLETPGHTLDHVSYVFDADKAVFAADTLFSIGCGRVFEGTYPMMWDSLLKLRT LPDDFRLYCGHEYTASNVKFALTVDPDNEALKARAAEVTRLRAANQPTIPVLLGEEKQANVFLRADDPAIAVRLRMKGAS AEEVFGELRERKNKS
Sequences:
>Translated_255_residues MAADIRVFTCLSDNFGYLIHDPATGATASVDAPEAGPIVRQLEANGWTLTDILITHHHYDHVGGVAELKQRYGCRVIGPH DRKAAIADVDLRVAHGDVVKVGELLARVLETPGHTLDHVSYVFDADKAVFAADTLFSIGCGRVFEGTYPMMWDSLLKLRT LPDDFRLYCGHEYTASNVKFALTVDPDNEALKARAAEVTRLRAANQPTIPVLLGEEKQANVFLRADDPAIAVRLRMKGAS AEEVFGELRERKNKS >Mature_254_residues AADIRVFTCLSDNFGYLIHDPATGATASVDAPEAGPIVRQLEANGWTLTDILITHHHYDHVGGVAELKQRYGCRVIGPHD RKAAIADVDLRVAHGDVVKVGELLARVLETPGHTLDHVSYVFDADKAVFAADTLFSIGCGRVFEGTYPMMWDSLLKLRTL PDDFRLYCGHEYTASNVKFALTVDPDNEALKARAAEVTRLRAANQPTIPVLLGEEKQANVFLRADDPAIAVRLRMKGASA EEVFGELRERKNKS
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family [H]
Homologues:
Organism=Homo sapiens, GI94538322, Length=233, Percent_Identity=38.1974248927039, Blast_Score=154, Evalue=6e-38, Organism=Homo sapiens, GI94538320, Length=233, Percent_Identity=38.1974248927039, Blast_Score=154, Evalue=7e-38, Organism=Homo sapiens, GI14150041, Length=231, Percent_Identity=37.2294372294372, Blast_Score=150, Evalue=8e-37, Organism=Homo sapiens, GI116642887, Length=221, Percent_Identity=41.1764705882353, Blast_Score=150, Evalue=1e-36, Organism=Homo sapiens, GI21703352, Length=221, Percent_Identity=41.1764705882353, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI46361987, Length=197, Percent_Identity=37.0558375634518, Blast_Score=130, Evalue=1e-30, Organism=Homo sapiens, GI41327741, Length=193, Percent_Identity=28.4974093264249, Blast_Score=70, Evalue=2e-12, Organism=Escherichia coli, GI1786406, Length=253, Percent_Identity=39.9209486166008, Blast_Score=154, Evalue=4e-39, Organism=Escherichia coli, GI1787158, Length=159, Percent_Identity=32.7044025157233, Blast_Score=72, Evalue=3e-14, Organism=Caenorhabditis elegans, GI17536925, Length=255, Percent_Identity=33.3333333333333, Blast_Score=126, Evalue=1e-29, Organism=Caenorhabditis elegans, GI17538952, Length=209, Percent_Identity=26.7942583732057, Blast_Score=68, Evalue=4e-12, Organism=Saccharomyces cerevisiae, GI6320478, Length=267, Percent_Identity=30.3370786516854, Blast_Score=92, Evalue=8e-20, Organism=Saccharomyces cerevisiae, GI6324614, Length=263, Percent_Identity=27.7566539923954, Blast_Score=80, Evalue=2e-16, Organism=Drosophila melanogaster, GI21356335, Length=260, Percent_Identity=37.3076923076923, Blast_Score=170, Evalue=7e-43, Organism=Drosophila melanogaster, GI24667711, Length=260, Percent_Identity=37.3076923076923, Blast_Score=170, Evalue=8e-43, Organism=Drosophila melanogaster, GI24667703, Length=260, Percent_Identity=37.3076923076923, Blast_Score=170, Evalue=1e-42, Organism=Drosophila melanogaster, GI221330176, Length=178, Percent_Identity=30.3370786516854, Blast_Score=79, Evalue=3e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR017782 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: =3.1.2.6 [H]
Molecular weight: Translated: 28023; Mature: 27892
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAADIRVFTCLSDNFGYLIHDPATGATASVDAPEAGPIVRQLEANGWTLTDILITHHHYD CCCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHEEECCCCEEEEEEEEECCCCH HVGGVAELKQRYGCRVIGPHDRKAAIADVDLRVAHGDVVKVGELLARVLETPGHTLDHVS HHCCHHHHHHHCCCEEECCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHH YVFDADKAVFAADTLFSIGCGRVFEGTYPMMWDSLLKLRTLPDDFRLYCGHEYTASNVKF HEECCCCCEEEHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCHHEEEECCEEECCCEEE ALTVDPDNEALKARAAEVTRLRAANQPTIPVLLGEEKQANVFLRADDPAIAVRLRMKGAS EEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCEEEEEEEECCCC AEEVFGELRERKNKS HHHHHHHHHHHCCCC >Mature Secondary Structure AADIRVFTCLSDNFGYLIHDPATGATASVDAPEAGPIVRQLEANGWTLTDILITHHHYD CCCEEEEEEECCCCCEEEECCCCCCCCCCCCCCCCCHHEEECCCCEEEEEEEEECCCCH HVGGVAELKQRYGCRVIGPHDRKAAIADVDLRVAHGDVVKVGELLARVLETPGHTLDHVS HHCCHHHHHHHCCCEEECCCCCCEEEEEEEEEEECCCHHHHHHHHHHHHHCCCCHHHHHH YVFDADKAVFAADTLFSIGCGRVFEGTYPMMWDSLLKLRTLPDDFRLYCGHEYTASNVKF HEECCCCCEEEHHHHHHCCCCCEECCCCHHHHHHHHHHHCCCCHHEEEECCEEECCCEEE ALTVDPDNEALKARAAEVTRLRAANQPTIPVLLGEEKQANVFLRADDPAIAVRLRMKGAS EEEECCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEEEECCCEEEEEEEECCCC AEEVFGELRERKNKS HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA