Definition Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession NC_009445
Length 7,456,587

Click here to switch to the map view.

The map label for this gene is 146337693

Identifier: 146337693

GI number: 146337693

Start: 576155

End: 576751

Strand: Reverse

Name: 146337693

Synonym: BRADO0561

Alternate gene names: NA

Gene position: 576751-576155 (Counterclockwise)

Preceding gene: 146337698

Following gene: 146337691

Centisome position: 7.73

GC content: 61.98

Gene sequence:

>597_bases
ATGGCGAAATCTGACCAACCCACCACGATCAAGAAATACGCGAACCGGCGGCTCTACAATACCGGGACGAGTACCTACGT
GACCCTCGAGGATCTGGCCGCGATGGTTAAGAACGGGGAGGATTTCCTCGTCTATGACGCCAAGACCGGCGACGACATCA
CCCGCTCGGTGCTGGCCCAGATCATCTTCGAGCAGGAGAACAAGGCCGGCCAGAACCTGCTGCCGACGACCTTCCTGCGC
CAGCTGATCCGCTTCTACGGCGACAGCATGCAGATGGTGGTTCCGAAATATCTGGAGCAGTCGATCGACACGCTGACCAA
GGAGCAGGAGAAGTTCCGCAAGCAGATCGCCGACACTTTCAGCGGCACGCCGTTCGCGCCGCTCGAGGAGCAGGTGCGCC
GCAACATGGAGCTGTTCCAGCAGACCTTCTCGATGTTCAAGCCGTTCGCGCCGGCCGCGCGGACGGAGGAGAAGGCGGCA
GAGCCTGCCGCCGCCGCTTCCGACGACAACATCGACGAGCTGCGCCGCCAGATGAAGGAAATGCAGGACCGGCTCGACCG
CATGTCCGAGCCGAAGAAGGACGAGCAGCAGGGCTGA

Upstream 100 bases:

>100_bases
CGAACTCGCTCGAAAGTGATTACGTTATTGCATTGCGTAGCTCGTTTGCCCTGCGGCACCCGCAGGGTTCCCTGTATCTC
GGTTTGCATGTGTGAGCTCC

Downstream 100 bases:

>100_bases
CCTGCCAGCATGAATCTCGGATGCCGGCGGCAGCTCAGCTCGCCGCCGGCAACTCCATCCGGCCCTGCTCGATCCAGGGG
CGCTCGACCGAGGCGAGGCC

Product: putative polyhydroxyalkanoate synthesis repressor PhaR-like

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MAKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTFLR
QLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTFSGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAA
EPAAAASDDNIDELRRQMKEMQDRLDRMSEPKKDEQQG

Sequences:

>Translated_198_residues
MAKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTFLR
QLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTFSGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAA
EPAAAASDDNIDELRRQMKEMQDRLDRMSEPKKDEQQG
>Mature_197_residues
AKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTFLRQ
LIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTFSGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAAE
PAAAASDDNIDELRRQMKEMQDRLDRMSEPKKDEQQG

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 22771; Mature: 22640

Theoretical pI: Translated: 4.87; Mature: 4.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQ
CCCCCCCHHHHHHHHCHHHCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
IIFEQENKAGQNLLPTTFLRQLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTF
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAAEPAAAASDDNIDELRRQMKE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MQDRLDRMSEPKKDEQQG
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
AKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQ
CCCCCCHHHHHHHHCHHHCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH
IIFEQENKAGQNLLPTTFLRQLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTF
HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAAEPAAAASDDNIDELRRQMKE
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH
MQDRLDRMSEPKKDEQQG
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]