| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337693
Identifier: 146337693
GI number: 146337693
Start: 576155
End: 576751
Strand: Reverse
Name: 146337693
Synonym: BRADO0561
Alternate gene names: NA
Gene position: 576751-576155 (Counterclockwise)
Preceding gene: 146337698
Following gene: 146337691
Centisome position: 7.73
GC content: 61.98
Gene sequence:
>597_bases ATGGCGAAATCTGACCAACCCACCACGATCAAGAAATACGCGAACCGGCGGCTCTACAATACCGGGACGAGTACCTACGT GACCCTCGAGGATCTGGCCGCGATGGTTAAGAACGGGGAGGATTTCCTCGTCTATGACGCCAAGACCGGCGACGACATCA CCCGCTCGGTGCTGGCCCAGATCATCTTCGAGCAGGAGAACAAGGCCGGCCAGAACCTGCTGCCGACGACCTTCCTGCGC CAGCTGATCCGCTTCTACGGCGACAGCATGCAGATGGTGGTTCCGAAATATCTGGAGCAGTCGATCGACACGCTGACCAA GGAGCAGGAGAAGTTCCGCAAGCAGATCGCCGACACTTTCAGCGGCACGCCGTTCGCGCCGCTCGAGGAGCAGGTGCGCC GCAACATGGAGCTGTTCCAGCAGACCTTCTCGATGTTCAAGCCGTTCGCGCCGGCCGCGCGGACGGAGGAGAAGGCGGCA GAGCCTGCCGCCGCCGCTTCCGACGACAACATCGACGAGCTGCGCCGCCAGATGAAGGAAATGCAGGACCGGCTCGACCG CATGTCCGAGCCGAAGAAGGACGAGCAGCAGGGCTGA
Upstream 100 bases:
>100_bases CGAACTCGCTCGAAAGTGATTACGTTATTGCATTGCGTAGCTCGTTTGCCCTGCGGCACCCGCAGGGTTCCCTGTATCTC GGTTTGCATGTGTGAGCTCC
Downstream 100 bases:
>100_bases CCTGCCAGCATGAATCTCGGATGCCGGCGGCAGCTCAGCTCGCCGCCGGCAACTCCATCCGGCCCTGCTCGATCCAGGGG CGCTCGACCGAGGCGAGGCC
Product: putative polyhydroxyalkanoate synthesis repressor PhaR-like
Products: NA
Alternate protein names: ORF4 [H]
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MAKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTFLR QLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTFSGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAA EPAAAASDDNIDELRRQMKEMQDRLDRMSEPKKDEQQG
Sequences:
>Translated_198_residues MAKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTFLR QLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTFSGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAA EPAAAASDDNIDELRRQMKEMQDRLDRMSEPKKDEQQG >Mature_197_residues AKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQIIFEQENKAGQNLLPTTFLRQ LIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTFSGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAAE PAAAASDDNIDELRRQMKEMQDRLDRMSEPKKDEQQG
Specific function: Unknown
COG id: COG5394
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012909 - InterPro: IPR010134 - InterPro: IPR007897 [H]
Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]
EC number: NA
Molecular weight: Translated: 22771; Mature: 22640
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQ CCCCCCCHHHHHHHHCHHHCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH IIFEQENKAGQNLLPTTFLRQLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTF HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAAEPAAAASDDNIDELRRQMKE CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH MQDRLDRMSEPKKDEQQG HHHHHHHHCCCCCCCCCC >Mature Secondary Structure AKSDQPTTIKKYANRRLYNTGTSTYVTLEDLAAMVKNGEDFLVYDAKTGDDITRSVLAQ CCCCCCHHHHHHHHCHHHCCCCCCEEEHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH IIFEQENKAGQNLLPTTFLRQLIRFYGDSMQMVVPKYLEQSIDTLTKEQEKFRKQIADTF HHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SGTPFAPLEEQVRRNMELFQQTFSMFKPFAPAARTEEKAAEPAAAASDDNIDELRRQMKE CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHH MQDRLDRMSEPKKDEQQG HHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1396692 [H]