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The map label for this gene is fps [H]

Identifier: 146337687

GI number: 146337687

Start: 570770

End: 571690

Strand: Reverse

Name: fps [H]

Synonym: BRADO0555

Alternate gene names: 146337687

Gene position: 571690-570770 (Counterclockwise)

Preceding gene: 146337691

Following gene: 146337686

Centisome position: 7.67

GC content: 70.68

Gene sequence:

>921_bases
ATGACCGCGACGGCCACCGATTTCACCCAACGCCTGGATAAGACCGCGGAGGAGACCGAAGCGCTGCTCGGCGAACTGCT
GTCCGATGCGCCGCTGGCCGACGAGATCGCCCGGCCGAAGCGGCTGATCGAGTCGATGCGCTATTCCAGCCTGGGCGGCG
GCAAGCGGCTGCGCCCGTTCCTGGTGGTCGAGAGCGCCGCCGTATTCGGCGTGCCGCGCCGCGGCGCGCTGATGGCGGGC
GCGGCGCTCGAATGCATCCACTGCTACTCCCTGATCCATGACGACCTGCCGGCAATGGACAATTCCGACCTGCGCCGCGG
CCGTCCGACCCTGCACAAGGTCTATGACGACGCCACCGCGATCCTTGCCGGCGACGCGCTGCTGACGATCGCCTTCGACA
TCATCACCCGCGACGAGATCCATCCCGACGCCGGCGTCCGCCTGGCGCTGACCCGGGCGCTCGCCCGTTGCGCCGGTGTC
GGCGGCATGGCCGGCGGCCAGATCCTCGACCTGGCCGGCGAAGGCAGGTTCGGCGACCGCGATCCGGTCGACGTCGCCCG
CGTGCAGCAGATGAAGACCGGCGCCCTGCTCCGCTTCGGCTGCATCGCCGGCGCCCTGCTCGGCCAGGCATCGGCGGCCG
AGTACAAGGCTCTCGACGATTACGGCCGTGCGCTCGGCGAAGCCTTCCAGATCGCCGACGATCTGCTCGACGTCGAAGGC
GATGCCGCCACGCTCGGCAAGCCGGCCGGCGCCGACGCCGAGCTCGGCAAGACCACCTTCGTCACGCAGCTCGGCATCGA
GGGTGCCAAGCAGCGCGTCCGCGACCTGCTCGCGCGTGGCGACGCAGCGCTGTCGATCTTCGGCGCCAAGGGCGACGTGC
TGCGCGCCGCCGCGCATTTCGTCGCCGAGCGCAAGAGCTGA

Upstream 100 bases:

>100_bases
TTCCGCGCTTGCGGCCGAAAGCCGCCTCCGTCCTCGCAATTGACGAAGTCGCCGCCATCAACGATTGTCCGGCGAATTTC
GCCCCTGGAGCTCTTCTTAA

Downstream 100 bases:

>100_bases
GCCGGGACCGCGCGGTTGACGGGACTTCATCCGGACGATCCGGTGCTCGCGCGCTTCGCGCGCCTGCCGCGTGGCTTGCG
CATCATCTATGCGCGTCCAC

Product: putative geranyltranstransferase

Products: NA

Alternate protein names: FPP synthase; (2E,6E)-farnesyl diphosphate synthase; Geranyltranstransferase [H]

Number of amino acids: Translated: 306; Mature: 305

Protein sequence:

>306_residues
MTATATDFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGALMAG
AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCAGV
GGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEG
DAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHFVAERKS

Sequences:

>Translated_306_residues
MTATATDFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGALMAG
AALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCAGV
GGMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEG
DAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHFVAERKS
>Mature_305_residues
TATATDFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPFLVVESAAVFGVPRRGALMAGA
ALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATAILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCAGVG
GMAGGQILDLAGEGRFGDRDPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEGD
AATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHFVAERKS

Specific function: Unknown

COG id: COG0142

COG function: function code H; Geranylgeranyl pyrophosphate synthase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the FPP/GGPP synthase family [H]

Homologues:

Organism=Homo sapiens, GI50659086, Length=225, Percent_Identity=28.8888888888889, Blast_Score=82, Evalue=8e-16,
Organism=Escherichia coli, GI1786623, Length=305, Percent_Identity=41.9672131147541, Blast_Score=193, Evalue=1e-50,
Organism=Escherichia coli, GI1789578, Length=267, Percent_Identity=31.4606741573034, Blast_Score=109, Evalue=2e-25,
Organism=Caenorhabditis elegans, GI17505681, Length=191, Percent_Identity=31.9371727748691, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24651612, Length=257, Percent_Identity=28.7937743190661, Blast_Score=87, Evalue=1e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000092
- InterPro:   IPR017446
- InterPro:   IPR008949 [H]

Pfam domain/function: PF00348 polyprenyl_synt [H]

EC number: =2.5.1.10 [H]

Molecular weight: Translated: 32288; Mature: 32157

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS00723 POLYPRENYL_SYNTHET_1 ; PS00444 POLYPRENYL_SYNTHET_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTATATDFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPF
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LVVESAAVFGVPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATA
EEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHH
ILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDR
HHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
DPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHF
CHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
VAERKS
HHHCCC
>Mature Secondary Structure 
TATATDFTQRLDKTAEETEALLGELLSDAPLADEIARPKRLIESMRYSSLGGGKRLRPF
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCE
LVVESAAVFGVPRRGALMAGAALECIHCYSLIHDDLPAMDNSDLRRGRPTLHKVYDDATA
EEEECHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCHHHHHHHHHHH
ILAGDALLTIAFDIITRDEIHPDAGVRLALTRALARCAGVGGMAGGQILDLAGEGRFGDR
HHHCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCC
DPVDVARVQQMKTGALLRFGCIAGALLGQASAAEYKALDDYGRALGEAFQIADDLLDVEG
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
DAATLGKPAGADAELGKTTFVTQLGIEGAKQRVRDLLARGDAALSIFGAKGDVLRAAAHF
CHHHCCCCCCCCCCCCCHHHHHHHCHHHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHH
VAERKS
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9515931 [H]