| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is chqB [H]
Identifier: 146337673
GI number: 146337673
Start: 552643
End: 553554
Strand: Direct
Name: chqB [H]
Synonym: BRADO0539
Alternate gene names: 146337673
Gene position: 552643-553554 (Clockwise)
Preceding gene: 146337672
Following gene: 146337677
Centisome position: 7.41
GC content: 66.67
Gene sequence:
>912_bases ATGCCGAAGGACCGCGCCATGACAATCTCCCGCGAACAGGACGTCACGTCAGCCGTGCTGGCCGTGATGGAGCAGACCTC CAACCCGCGGCTGCGCGAGATCATGGTGTCGCTGATCAGGCACCTGCACGGCTTCGTCCGCGATGTCCGTCTCACCGAGG CCGAATTCCGCGAGGCGGCCGCGCTCATCGCCGAGCTCGGACAGCGCACCAACGACACGCACAACGAAGTCGTGCTGATG GCCGGCTCGCTCGGCGTCTCGCCGCTGGTCTGCCTGCTCAACAATGGCGACGGCGGCAACACCGAGACGGCGCAATCGCT GCTCGGCCCGTTCTGGCGGCTGAACTCCCCGCGCACGGAAAACGGCGGCTCGATCCTGCGCTCGGCCACGCCGGGCCCTG CGCTGTTCGTGCAAGGGCACGTGGTCGATCCGAACGGAGCGCCGGTGGCCGGCGCCGAGGTCGACGTCTGGCACGCGTCT CCGGTCGGCTACTACGAAAACCAGGATCCCGACCAGGCCGACATGAACCTGCGCGGCAAGTTCACCACCGACGAAGACGG CCGATTCTGGTTTCGCTCGGTGATGATGGTCGGCTATCCCATCCCGACCGACGGCGTCGTCGGCCGTCTCCTGAAGGCGC AGGGCCGCCATCCCTATCGTCCCGCGCATCTGCATGCGCTGATCGTCAAGCCGGGCTACAGGGTCCTGATCTCGCAGGTC TACGACCCCAACGACCCGCACATCGACAGCGACGTCCAGTTCGGCGTGACGAAAGCGCTGCTCGGCAACTTCATTCGCCA CGACGAGCCGCATCCGACCGAGCCCGACGTCACCGCGGCCTGGTACTCGCTCGACCACGTCTACCGCATGGAGTCCGGTG ACACCGTGTTGCCAAGGGCGCCGATCAAGTAG
Upstream 100 bases:
>100_bases AACTAACACGCCGGCGTCATTGCGAGCGAAGCGAAGCAATCCAGGGTCGCGCGCGCAGCTCTGGATTGCTTCGTCGCTTC GCTCCTCGCAATGACGGAGT
Downstream 100 bases:
>100_bases CGCTTCGCAACGGTACGGGCGGCGGCAATGTCGGCTTCGGCGAGGGCCTCGCCGGCGAGCTCCTGCGCATGTATGCGCTT AAGCCCCTGATCGACGAGAT
Product: catechol 1,2-dioxygenase
Products: NA
Alternate protein names: 1,2-HQD [H]
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPKDRAMTISREQDVTSAVLAVMEQTSNPRLREIMVSLIRHLHGFVRDVRLTEAEFREAAALIAELGQRTNDTHNEVVLM AGSLGVSPLVCLLNNGDGGNTETAQSLLGPFWRLNSPRTENGGSILRSATPGPALFVQGHVVDPNGAPVAGAEVDVWHAS PVGYYENQDPDQADMNLRGKFTTDEDGRFWFRSVMMVGYPIPTDGVVGRLLKAQGRHPYRPAHLHALIVKPGYRVLISQV YDPNDPHIDSDVQFGVTKALLGNFIRHDEPHPTEPDVTAAWYSLDHVYRMESGDTVLPRAPIK
Sequences:
>Translated_303_residues MPKDRAMTISREQDVTSAVLAVMEQTSNPRLREIMVSLIRHLHGFVRDVRLTEAEFREAAALIAELGQRTNDTHNEVVLM AGSLGVSPLVCLLNNGDGGNTETAQSLLGPFWRLNSPRTENGGSILRSATPGPALFVQGHVVDPNGAPVAGAEVDVWHAS PVGYYENQDPDQADMNLRGKFTTDEDGRFWFRSVMMVGYPIPTDGVVGRLLKAQGRHPYRPAHLHALIVKPGYRVLISQV YDPNDPHIDSDVQFGVTKALLGNFIRHDEPHPTEPDVTAAWYSLDHVYRMESGDTVLPRAPIK >Mature_302_residues PKDRAMTISREQDVTSAVLAVMEQTSNPRLREIMVSLIRHLHGFVRDVRLTEAEFREAAALIAELGQRTNDTHNEVVLMA GSLGVSPLVCLLNNGDGGNTETAQSLLGPFWRLNSPRTENGGSILRSATPGPALFVQGHVVDPNGAPVAGAEVDVWHASP VGYYENQDPDQADMNLRGKFTTDEDGRFWFRSVMMVGYPIPTDGVVGRLLKAQGRHPYRPAHLHALIVKPGYRVLISQVY DPNDPHIDSDVQFGVTKALLGNFIRHDEPHPTEPDVTAAWYSLDHVYRMESGDTVLPRAPIK
Specific function: Catalyzes the ortho-cleavage of the aromatic ring of hydroxyquinol [H]
COG id: COG3485
COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007535 - InterPro: IPR000627 - InterPro: IPR015889 [H]
Pfam domain/function: PF00775 Dioxygenase_C; PF04444 Dioxygenase_N [H]
EC number: =1.13.11.37 [H]
Molecular weight: Translated: 33428; Mature: 33297
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: PS00083 INTRADIOL_DIOXYGENAS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDRAMTISREQDVTSAVLAVMEQTSNPRLREIMVSLIRHLHGFVRDVRLTEAEFREAA CCCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIAELGQRTNDTHNEVVLMAGSLGVSPLVCLLNNGDGGNTETAQSLLGPFWRLNSPRTE HHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC NGGSILRSATPGPALFVQGHVVDPNGAPVAGAEVDVWHASPVGYYENQDPDQADMNLRGK CCCCEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEE FTTDEDGRFWFRSVMMVGYPIPTDGVVGRLLKAQGRHPYRPAHLHALIVKPGYRVLISQV ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH YDPNDPHIDSDVQFGVTKALLGNFIRHDEPHPTEPDVTAAWYSLDHVYRMESGDTVLPRA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEECCCCEECCCC PIK CCC >Mature Secondary Structure PKDRAMTISREQDVTSAVLAVMEQTSNPRLREIMVSLIRHLHGFVRDVRLTEAEFREAA CCCCCEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ALIAELGQRTNDTHNEVVLMAGSLGVSPLVCLLNNGDGGNTETAQSLLGPFWRLNSPRTE HHHHHHHHCCCCCCCEEEEEECCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCC NGGSILRSATPGPALFVQGHVVDPNGAPVAGAEVDVWHASPVGYYENQDPDQADMNLRGK CCCCEEECCCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCEE FTTDEDGRFWFRSVMMVGYPIPTDGVVGRLLKAQGRHPYRPAHLHALIVKPGYRVLISQV ECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHH YDPNDPHIDSDVQFGVTKALLGNFIRHDEPHPTEPDVTAAWYSLDHVYRMESGDTVLPRA CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHEEEECCCCEECCCC PIK CCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9141483 [H]