| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337669
Identifier: 146337669
GI number: 146337669
Start: 546440
End: 547231
Strand: Direct
Name: 146337669
Synonym: BRADO0535
Alternate gene names: NA
Gene position: 546440-547231 (Clockwise)
Preceding gene: 146337668
Following gene: 146337670
Centisome position: 7.33
GC content: 69.44
Gene sequence:
>792_bases ATGCCCTTCGACTCCTCCTTCCTGCTCCTGCTCGGCCTGCGGATGGCGATCGCGGCGTCGTTCGTGGTGTCGGCGTCGAT GATCGCCGAGCGCACCGGCCCCGTGATCGGCGCGCTGGTCGCGACCTTGCCGATCTCGGCCGGGCCGACCTACGTGTTCC TGGCGCTCGATCACGACGCCGCCTTCATCGCGCAAGGCGCGCTCACGAGCCTGCCGGTCAACGCCGCTACGATCTTCCTC AGCCTCGCTTATGCCGTGCTCGCGCAGCGCCACAGCGTATGGGTCGCGAGCGCCACCGCCGTCGCGGTGTGGCTCGGTCT CGCGTCCCTCATCAAAAGCGTACAGTGGACGCTCGCGATGGGCATCGTCGCCAACATCGTCACCTTCGTGATCTGCCTGC CGCTGTTGCAGCGCTATCGCCACGCCAAGATGCCGCTCATCGTCAGGCGCTGGTACGACGTGCCGCTGCGCGCGTCCTTG GTCGCGACGCTGGTCGCCACCGTCACCTCGGTGTCAGGGTGGGCTGGCCCGGGCGTGTCCGGCATCCTCGCGCTGTTTCC GATCGTCTTCACTTCGATGATGCTGATCCTGCAGCCGCGCATCGGCGGCCCCGCCACCGCCGCCGTGATGGCCAACGGCG CCTGGGGCCTGATCGGCTTCTCGCTCGCCGTCGTCGTGCTGCATCTCGGCAGCCTGCATCTCGGCGCCGTCGCAGGCCTC AGCGGCGCACTCGCCACCTGCGTCGGCTGGAATCTCGGCCTGTGGGCGCTCGGTCGCCGCCGGCCGGCCTGA
Upstream 100 bases:
>100_bases TTTCCCATGACCGCCTGTGGTTATGGGTCCCGGGTCAGCGCTTCCACGCGACGATGCTTGCGCATCGCCGCGTTCCGCTT GCCCGGGACGACGGCTGAAC
Downstream 100 bases:
>100_bases CGCCGGCCGCATCAGCTATGGTTGTATGTCCCCGGCCTTGAACCTTCACGAGGGCGCCCGCGACAACGCAACTGATAGGT GGGTCATCGGTCGAACGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 263; Mature: 262
Protein sequence:
>263_residues MPFDSSFLLLLGLRMAIAASFVVSASMIAERTGPVIGALVATLPISAGPTYVFLALDHDAAFIAQGALTSLPVNAATIFL SLAYAVLAQRHSVWVASATAVAVWLGLASLIKSVQWTLAMGIVANIVTFVICLPLLQRYRHAKMPLIVRRWYDVPLRASL VATLVATVTSVSGWAGPGVSGILALFPIVFTSMMLILQPRIGGPATAAVMANGAWGLIGFSLAVVVLHLGSLHLGAVAGL SGALATCVGWNLGLWALGRRRPA
Sequences:
>Translated_263_residues MPFDSSFLLLLGLRMAIAASFVVSASMIAERTGPVIGALVATLPISAGPTYVFLALDHDAAFIAQGALTSLPVNAATIFL SLAYAVLAQRHSVWVASATAVAVWLGLASLIKSVQWTLAMGIVANIVTFVICLPLLQRYRHAKMPLIVRRWYDVPLRASL VATLVATVTSVSGWAGPGVSGILALFPIVFTSMMLILQPRIGGPATAAVMANGAWGLIGFSLAVVVLHLGSLHLGAVAGL SGALATCVGWNLGLWALGRRRPA >Mature_262_residues PFDSSFLLLLGLRMAIAASFVVSASMIAERTGPVIGALVATLPISAGPTYVFLALDHDAAFIAQGALTSLPVNAATIFLS LAYAVLAQRHSVWVASATAVAVWLGLASLIKSVQWTLAMGIVANIVTFVICLPLLQRYRHAKMPLIVRRWYDVPLRASLV ATLVATVTSVSGWAGPGVSGILALFPIVFTSMMLILQPRIGGPATAAVMANGAWGLIGFSLAVVVLHLGSLHLGAVAGLS GALATCVGWNLGLWALGRRRPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27391; Mature: 27260
Theoretical pI: Translated: 11.30; Mature: 11.30
Prosite motif: PS00284 SERPIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFDSSFLLLLGLRMAIAASFVVSASMIAERTGPVIGALVATLPISAGPTYVFLALDHDA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCH AFIAQGALTSLPVNAATIFLSLAYAVLAQRHSVWVASATAVAVWLGLASLIKSVQWTLAM HHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVANIVTFVICLPLLQRYRHAKMPLIVRRWYDVPLRASLVATLVATVTSVSGWAGPGVS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHH GILALFPIVFTSMMLILQPRIGGPATAAVMANGAWGLIGFSLAVVVLHLGSLHLGAVAGL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH SGALATCVGWNLGLWALGRRRPA HHHHHHHHCCCCCHHHCCCCCCC >Mature Secondary Structure PFDSSFLLLLGLRMAIAASFVVSASMIAERTGPVIGALVATLPISAGPTYVFLALDHDA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCCCEEEEEECCCH AFIAQGALTSLPVNAATIFLSLAYAVLAQRHSVWVASATAVAVWLGLASLIKSVQWTLAM HHHHHCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GIVANIVTFVICLPLLQRYRHAKMPLIVRRWYDVPLRASLVATLVATVTSVSGWAGPGVS HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHH GILALFPIVFTSMMLILQPRIGGPATAAVMANGAWGLIGFSLAVVVLHLGSLHLGAVAGL HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHHHHHHHH SGALATCVGWNLGLWALGRRRPA HHHHHHHHCCCCCHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA