| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is regS [H]
Identifier: 146337650
GI number: 146337650
Start: 522019
End: 523380
Strand: Reverse
Name: regS [H]
Synonym: BRADO0516
Alternate gene names: 146337650
Gene position: 523380-522019 (Counterclockwise)
Preceding gene: 146337656
Following gene: 146337649
Centisome position: 7.02
GC content: 66.37
Gene sequence:
>1362_bases ATGACCGAAGCCATGACCGATGCCCTGATCATCGATACGCCCGACACGGATTATCGCCATCCGCGCCAGCGCGTCCGGCT CGACACCATCCTGCGGCTGCGCTGGCTGGCGGCGCTCGGTCAATTGAGCGCGATCTTCATCGTCGTGCAGGGATTGGAGT TCGATCTCCCGGTCGTGCCATGCCTGGCCGTCATCAGCGTGTCGGCGCTGCTTAATCTCGGCCTGCAGATCGCCTTCAAC CCGATGCAGCTGTTGGAGCCGGCGCATGCCGGCGGGCTGCTCGCGCTCAACATCATCGAGCTGACGGTGCTGCTCTATCT CACCGGCGGCCTCGAGAACCCGTTCTCCTACATGTTCCTGGCGCCGGTGCTGATCGCCGCCACCGCCCTGCCCGTGCGGC TGACGATCATGCTGGGATTGCTGGCCGTGGCCTGTGCGACCGCGCTGTTCTTCATGCACCTGCCGCTGCCCTGGGAGGGC GAGGAGCCGCTGATCTTTCCGCCGATCTATCTGTTCGGCGTCTGGCTTTCGATCGCGCTGGCGATCGGCGTCACCAGCCT CTACGCCTTCCAGGTCACCGAGGAGGCGCGCAAGCTGTCGAACGCGCTGGCCGCCACCGAGCTGGTGCTGGCGCGCGAGC AGCATCTCACCCAGCTCGACGGCCTCGCGGCGGCGGCCGCGCACGAGCTCGGCACGCCGCTCGCCACCATCGTGCTGATC TCGCGTGAATTGGAGCGCGCGCTGCAGGACAACAGCCACGTGACGTCCGACATCAAGACACTGCGCGAGCAGGCGCAGCG CTGCCGCGACATTCTCGGCAAGATCACCCAGCTGTCATCGGTGGGGTCGATGTACGACCGGATGAAGCTGTCGACCTTGA TCGAGGAGACGGTGGCGCCGCATCGCGACTTCGGCGTCGAGATCAAGGTGCGCGTCGCCGTGGCCGCCACCAAGGAGCCG GTCGGCTCGCGCAATCCGGCCATCCTTTATGGTGTCGGCAACATCCTGGAGAACGCGGTCGACTTCGCGCGCAATGCCGT CGAGGTGAATGCCTGGTGGAACAACGACACGGTCGAACTGGTGATCTCCGACGACGGCCCCGGCTTCGCGCCCGACATTC TCAAGCGCATCGGCGAGCCCTATCTGTCGCGCCGCCGGAGCGGCGAGGATGGCCAGGGCGGTAACCAGGGCGGCGGCCTC GGACTCGGCGTGTTCATTGCCCGCACCTTGCTGGAGCGAACCGGCGCCAAGGTCTCGTTTACCAACCGCACCTTCCCCGA TCATGGCGCCGTGGTCCAGATCGTCTGGCCGCGCCGGCGTTTCGAGGCCGTCGAGGATGGCGAGGACGACCAGCCGGAAT GA
Upstream 100 bases:
>100_bases TGTCCCGGGTTCATTGAGGCATTGTGCCGCAAACCGCAACAGGCCACCAACGGCCGGGCCGATTTGTCGCCGCGCCCGCG CGGGTTTAAAGTTCCCGACC
Downstream 100 bases:
>100_bases TCATGCCGCGCGCCACTGGTATACAGAGACGGACGGCACCGGCGCGGCGTCACGCCGCAGACTGCGGCATCCCGTGATCT TGGCAGCGAGCCATGCAGGC
Product: two component sensor histidine kinase (RegS) membrane protein
Products: NA
Alternate protein names: Protein prrB [H]
Number of amino acids: Translated: 453; Mature: 452
Protein sequence:
>453_residues MTEAMTDALIIDTPDTDYRHPRQRVRLDTILRLRWLAALGQLSAIFIVVQGLEFDLPVVPCLAVISVSALLNLGLQIAFN PMQLLEPAHAGGLLALNIIELTVLLYLTGGLENPFSYMFLAPVLIAATALPVRLTIMLGLLAVACATALFFMHLPLPWEG EEPLIFPPIYLFGVWLSIALAIGVTSLYAFQVTEEARKLSNALAATELVLAREQHLTQLDGLAAAAAHELGTPLATIVLI SRELERALQDNSHVTSDIKTLREQAQRCRDILGKITQLSSVGSMYDRMKLSTLIEETVAPHRDFGVEIKVRVAVAATKEP VGSRNPAILYGVGNILENAVDFARNAVEVNAWWNNDTVELVISDDGPGFAPDILKRIGEPYLSRRRSGEDGQGGNQGGGL GLGVFIARTLLERTGAKVSFTNRTFPDHGAVVQIVWPRRRFEAVEDGEDDQPE
Sequences:
>Translated_453_residues MTEAMTDALIIDTPDTDYRHPRQRVRLDTILRLRWLAALGQLSAIFIVVQGLEFDLPVVPCLAVISVSALLNLGLQIAFN PMQLLEPAHAGGLLALNIIELTVLLYLTGGLENPFSYMFLAPVLIAATALPVRLTIMLGLLAVACATALFFMHLPLPWEG EEPLIFPPIYLFGVWLSIALAIGVTSLYAFQVTEEARKLSNALAATELVLAREQHLTQLDGLAAAAAHELGTPLATIVLI SRELERALQDNSHVTSDIKTLREQAQRCRDILGKITQLSSVGSMYDRMKLSTLIEETVAPHRDFGVEIKVRVAVAATKEP VGSRNPAILYGVGNILENAVDFARNAVEVNAWWNNDTVELVISDDGPGFAPDILKRIGEPYLSRRRSGEDGQGGNQGGGL GLGVFIARTLLERTGAKVSFTNRTFPDHGAVVQIVWPRRRFEAVEDGEDDQPE >Mature_452_residues TEAMTDALIIDTPDTDYRHPRQRVRLDTILRLRWLAALGQLSAIFIVVQGLEFDLPVVPCLAVISVSALLNLGLQIAFNP MQLLEPAHAGGLLALNIIELTVLLYLTGGLENPFSYMFLAPVLIAATALPVRLTIMLGLLAVACATALFFMHLPLPWEGE EPLIFPPIYLFGVWLSIALAIGVTSLYAFQVTEEARKLSNALAATELVLAREQHLTQLDGLAAAAAHELGTPLATIVLIS RELERALQDNSHVTSDIKTLREQAQRCRDILGKITQLSSVGSMYDRMKLSTLIEETVAPHRDFGVEIKVRVAVAATKEPV GSRNPAILYGVGNILENAVDFARNAVEVNAWWNNDTVELVISDDGPGFAPDILKRIGEPYLSRRRSGEDGQGGNQGGGLG LGVFIARTLLERTGAKVSFTNRTFPDHGAVVQIVWPRRRFEAVEDGEDDQPE
Specific function: Member of the two-component regulatory system RegB/RegA. Involved in the positive regulation of photosynthesis gene expression in response to anaerobiosis. Also involved in positive regulation of the cbbI and cbbII Calvin cycle CO2 fixation operons, as we
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 histidine kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 - InterPro: IPR004358 - InterPro: IPR003661 - InterPro: IPR005467 - InterPro: IPR009082 [H]
Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]
EC number: =2.7.13.3 [H]
Molecular weight: Translated: 49465; Mature: 49334
Theoretical pI: Translated: 4.82; Mature: 4.82
Prosite motif: PS50109 HIS_KIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEAMTDALIIDTPDTDYRHPRQRVRLDTILRLRWLAALGQLSAIFIVVQGLEFDLPVVP CCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHH CLAVISVSALLNLGLQIAFNPMQLLEPAHAGGLLALNIIELTVLLYLTGGLENPFSYMFL HHHHHHHHHHHHCCHHEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH APVLIAATALPVRLTIMLGLLAVACATALFFMHLPLPWEGEEPLIFPPIYLFGVWLSIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHH AIGVTSLYAFQVTEEARKLSNALAATELVLAREQHLTQLDGLAAAAAHELGTPLATIVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SRELERALQDNSHVTSDIKTLREQAQRCRDILGKITQLSSVGSMYDRMKLSTLIEETVAP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HRDFGVEIKVRVAVAATKEPVGSRNPAILYGVGNILENAVDFARNAVEVNAWWNNDTVEL CCCCCCEEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCCEEEE VISDDGPGFAPDILKRIGEPYLSRRRSGEDGQGGNQGGGLGLGVFIARTLLERTGAKVSF EEECCCCCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE TNRTFPDHGAVVQIVWPRRRFEAVEDGEDDQPE CCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCC >Mature Secondary Structure TEAMTDALIIDTPDTDYRHPRQRVRLDTILRLRWLAALGQLSAIFIVVQGLEFDLPVVP CCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCHHH CLAVISVSALLNLGLQIAFNPMQLLEPAHAGGLLALNIIELTVLLYLTGGLENPFSYMFL HHHHHHHHHHHHCCHHEEECHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH APVLIAATALPVRLTIMLGLLAVACATALFFMHLPLPWEGEEPLIFPPIYLFGVWLSIAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECHHHHHHHHHHHHH AIGVTSLYAFQVTEEARKLSNALAATELVLAREQHLTQLDGLAAAAAHELGTPLATIVLI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH SRELERALQDNSHVTSDIKTLREQAQRCRDILGKITQLSSVGSMYDRMKLSTLIEETVAP HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC HRDFGVEIKVRVAVAATKEPVGSRNPAILYGVGNILENAVDFARNAVEVNAWWNNDTVEL CCCCCCEEEEEEEEEECCCCCCCCCCEEEEEHHHHHHHHHHHHHCCEEEEEEECCCEEEE VISDDGPGFAPDILKRIGEPYLSRRRSGEDGQGGNQGGGLGLGVFIARTLLERTGAKVSF EEECCCCCCCHHHHHHCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEE TNRTFPDHGAVVQIVWPRRRFEAVEDGEDDQPE CCCCCCCCCCEEEEECCHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7751278; 10358089 [H]