| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is treS [H]
Identifier: 146337646
GI number: 146337646
Start: 518312
End: 520021
Strand: Reverse
Name: treS [H]
Synonym: BRADO0512
Alternate gene names: 146337646
Gene position: 520021-518312 (Counterclockwise)
Preceding gene: 146337649
Following gene: 146337644
Centisome position: 6.97
GC content: 64.91
Gene sequence:
>1710_bases ATGATCGATGATCTCTGGTACAAGAACGCCGTGTTCTACTGCCTGTCGGTCGGCACCTACATGGATGCCGACGGCGACGG CATCGGCGATTTCAAGGGGCTGACGCGCCGGCTCGATTATCTGCACGGCCTCGGCATCACCGCGATCTGGCTGATGCCGT TCCAGCCTTCGCCGCAGCGTGACGACGGCTATGACGTCGCCGACTATTACGGCGTCGACCCGCGCTACGGCACGCTCGGC GATTTCGTGCAGTTCACCCATGGCTGCAAGCAGCGCGGCATCCGCGTGATCATCGACCTCGTCGTCAACCACACCTCCGA CCAGCATCCGTGGTTCATCGATGCCCGCAGCGCGAAGCACTCGCGCTACCGCGACTGGTATGTCTGGTCCGACAGGAAGC CGGCCAATGCCGACAAGGGCATGGTGTTTCCCGGCGTGCAGAAGACGACCTGGACGCGCGACAAGCAGGCCGGCGCCTAC TACTTCCACCGCTTCTATGATTTCCAGCCCGATCTCAACACCTCGAACCCGGAGGTGCAGGCCGAGATCCTCAAGATCAT GGGCTTCTGGATCCAGCTCGGCGTCTCCGGCTTCCGCATGGATGCGGTGCCGTTCGTGATCGCGGCCAAGGGCGCCGATG TGAAGAAGCCGGTCGAGCAGTACGAGATGCTGCGGACGTTCCGGGAATTCCTGCAATGGCGGCAGGGCGAGGCGATCATC CTCGCCGAGGCGAACGTGCTGCCGGACACCGACATGGAGTATTTCGGCGACGACGGCGACCGCATGCACATGATGTTCAA CTTCCACGTCAACCAGCATCTGTTCTATGCACTCGCCGCCTCCGACGTCAGGCCGCTCGCCAAGGCCTTGCAGGCGACCA AGCCGCGGCCGGCCGCGGCGCAATGGGGCCTGTTCCTGCGCAATCACGACGAGCTCGATCTCGGCCGCTTGAGCAAGCCC CAGCGCGACGCGGTGTTCGCCGCGTTCGGGCCGGACAAGAGCATGCAGCTGTACGATCGCGGCATCCGCCGGCGGCTCGC GCCGATGCTCGGCGGCGACCGCCGCCGGATCGAGCTGGCCTACAGCCTGATGTTCACGTTGCCCGGCACCCCGGTGATCC GCTACGGCGACGAGCTTGCGATGGGCGACGACCTCAAGCTGCCCGAGCGCAATTGCGCGCGCACCCCGATGCAATGGTCG ACCGAGCCGCATGGCGGGTTCACCAAGAGCGAGACGGCCGTGTCGCCCGTCATCGACCACGGTCCCTACGGCTACGAGCA CGTCAACGCCGCTAAGCAGCGGCGCGATCCCGATTCCATGCTGAACTGGACCGAGCGCATCATCCGAATGCGCAAGGAGG TGCCGGAGGTCGGCTGGGGCGATTTCCAGGTGATCGCGACGAAGGACCCGGCCGTCCTGATCATGCGCTACGACTGGCGC AACAATTCGGTGCTGTTCGTGCACAATCTCGATGAGAAGCCGCGCGAGATCTCGTTCGATGCGGGGCTGCCGGATGACAC CGGCAAGCTGCTGATCAATCTCCTGTCCGAGGATCACAGCCACGCCGACGACCGCGGCCGCCACACGCTCGTTCTCGAGC CCTACGGCTACCGCTGGTACCGCGTCGGCGGCCTCGACTATCTGCTGCGGCGGAGCGACATCGAGACGGAGAGCCCGGGA AAGCGCGCGAGAAAGGGGCGAAAGCGGTGA
Upstream 100 bases:
>100_bases CCTCGCCCAAGCGCGCTGATCCCCGCGGAAACGGAACCCGACGGGAGACTTCGGCTTATCAACCGGCCGCCCACAGGGGC GTCGCAACGGGGCGCCGTCG
Downstream 100 bases:
>100_bases GGCCCTGCATTGTCCATGGGACTATGAGTTGGCCACAGCGCCTCCTCAATTTCGGTGTCGTCCCGGGCTCGACCCGGGAC CCATAACCACGGGCCGTCGT
Product: maltose alpha-D-glucosyltransferase
Products: NA
Alternate protein names: Maltose alpha-D-glucosyltransferase [H]
Number of amino acids: Translated: 569; Mature: 569
Protein sequence:
>569_residues MIDDLWYKNAVFYCLSVGTYMDADGDGIGDFKGLTRRLDYLHGLGITAIWLMPFQPSPQRDDGYDVADYYGVDPRYGTLG DFVQFTHGCKQRGIRVIIDLVVNHTSDQHPWFIDARSAKHSRYRDWYVWSDRKPANADKGMVFPGVQKTTWTRDKQAGAY YFHRFYDFQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAVPFVIAAKGADVKKPVEQYEMLRTFREFLQWRQGEAII LAEANVLPDTDMEYFGDDGDRMHMMFNFHVNQHLFYALAASDVRPLAKALQATKPRPAAAQWGLFLRNHDELDLGRLSKP QRDAVFAAFGPDKSMQLYDRGIRRRLAPMLGGDRRRIELAYSLMFTLPGTPVIRYGDELAMGDDLKLPERNCARTPMQWS TEPHGGFTKSETAVSPVIDHGPYGYEHVNAAKQRRDPDSMLNWTERIIRMRKEVPEVGWGDFQVIATKDPAVLIMRYDWR NNSVLFVHNLDEKPREISFDAGLPDDTGKLLINLLSEDHSHADDRGRHTLVLEPYGYRWYRVGGLDYLLRRSDIETESPG KRARKGRKR
Sequences:
>Translated_569_residues MIDDLWYKNAVFYCLSVGTYMDADGDGIGDFKGLTRRLDYLHGLGITAIWLMPFQPSPQRDDGYDVADYYGVDPRYGTLG DFVQFTHGCKQRGIRVIIDLVVNHTSDQHPWFIDARSAKHSRYRDWYVWSDRKPANADKGMVFPGVQKTTWTRDKQAGAY YFHRFYDFQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAVPFVIAAKGADVKKPVEQYEMLRTFREFLQWRQGEAII LAEANVLPDTDMEYFGDDGDRMHMMFNFHVNQHLFYALAASDVRPLAKALQATKPRPAAAQWGLFLRNHDELDLGRLSKP QRDAVFAAFGPDKSMQLYDRGIRRRLAPMLGGDRRRIELAYSLMFTLPGTPVIRYGDELAMGDDLKLPERNCARTPMQWS TEPHGGFTKSETAVSPVIDHGPYGYEHVNAAKQRRDPDSMLNWTERIIRMRKEVPEVGWGDFQVIATKDPAVLIMRYDWR NNSVLFVHNLDEKPREISFDAGLPDDTGKLLINLLSEDHSHADDRGRHTLVLEPYGYRWYRVGGLDYLLRRSDIETESPG KRARKGRKR >Mature_569_residues MIDDLWYKNAVFYCLSVGTYMDADGDGIGDFKGLTRRLDYLHGLGITAIWLMPFQPSPQRDDGYDVADYYGVDPRYGTLG DFVQFTHGCKQRGIRVIIDLVVNHTSDQHPWFIDARSAKHSRYRDWYVWSDRKPANADKGMVFPGVQKTTWTRDKQAGAY YFHRFYDFQPDLNTSNPEVQAEILKIMGFWIQLGVSGFRMDAVPFVIAAKGADVKKPVEQYEMLRTFREFLQWRQGEAII LAEANVLPDTDMEYFGDDGDRMHMMFNFHVNQHLFYALAASDVRPLAKALQATKPRPAAAQWGLFLRNHDELDLGRLSKP QRDAVFAAFGPDKSMQLYDRGIRRRLAPMLGGDRRRIELAYSLMFTLPGTPVIRYGDELAMGDDLKLPERNCARTPMQWS TEPHGGFTKSETAVSPVIDHGPYGYEHVNAAKQRRDPDSMLNWTERIIRMRKEVPEVGWGDFQVIATKDPAVLIMRYDWR NNSVLFVHNLDEKPREISFDAGLPDDTGKLLINLLSEDHSHADDRGRHTLVLEPYGYRWYRVGGLDYLLRRSDIETESPG KRARKGRKR
Specific function: Catalyzes the conversion of maltose into alpha,alpha- trehalose by transglucosylation [H]
COG id: COG0366
COG function: function code G; Glycosidases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 13 family [H]
Homologues:
Organism=Homo sapiens, GI187423904, Length=479, Percent_Identity=27.348643006263, Blast_Score=180, Evalue=3e-45, Organism=Escherichia coli, GI1790687, Length=550, Percent_Identity=30.7272727272727, Blast_Score=219, Evalue=4e-58, Organism=Escherichia coli, GI1786604, Length=461, Percent_Identity=25.3796095444685, Blast_Score=91, Evalue=1e-19, Organism=Escherichia coli, GI87081873, Length=358, Percent_Identity=22.9050279329609, Blast_Score=89, Evalue=9e-19, Organism=Caenorhabditis elegans, GI32565753, Length=414, Percent_Identity=24.3961352657005, Blast_Score=96, Evalue=7e-20, Organism=Caenorhabditis elegans, GI25147709, Length=484, Percent_Identity=23.5537190082645, Blast_Score=86, Evalue=6e-17, Organism=Saccharomyces cerevisiae, GI6322245, Length=609, Percent_Identity=27.4220032840723, Blast_Score=191, Evalue=3e-49, Organism=Saccharomyces cerevisiae, GI6321726, Length=203, Percent_Identity=38.423645320197, Blast_Score=156, Evalue=1e-38, Organism=Saccharomyces cerevisiae, GI6321731, Length=204, Percent_Identity=37.7450980392157, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6319776, Length=204, Percent_Identity=37.7450980392157, Blast_Score=154, Evalue=5e-38, Organism=Saccharomyces cerevisiae, GI6322241, Length=203, Percent_Identity=37.4384236453202, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6322021, Length=203, Percent_Identity=37.4384236453202, Blast_Score=153, Evalue=6e-38, Organism=Saccharomyces cerevisiae, GI6324416, Length=203, Percent_Identity=37.4384236453202, Blast_Score=153, Evalue=8e-38, Organism=Drosophila melanogaster, GI24586589, Length=563, Percent_Identity=29.1296625222025, Blast_Score=211, Evalue=1e-54, Organism=Drosophila melanogaster, GI221330053, Length=597, Percent_Identity=29.1457286432161, Blast_Score=209, Evalue=5e-54, Organism=Drosophila melanogaster, GI24586591, Length=533, Percent_Identity=29.2682926829268, Blast_Score=204, Evalue=1e-52, Organism=Drosophila melanogaster, GI24586593, Length=569, Percent_Identity=27.2407732864675, Blast_Score=202, Evalue=6e-52, Organism=Drosophila melanogaster, GI24586587, Length=520, Percent_Identity=28.4615384615385, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI45549022, Length=591, Percent_Identity=27.4111675126904, Blast_Score=200, Evalue=2e-51, Organism=Drosophila melanogaster, GI24586597, Length=573, Percent_Identity=27.9232111692845, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24586599, Length=545, Percent_Identity=26.9724770642202, Blast_Score=186, Evalue=4e-47, Organism=Drosophila melanogaster, GI24583745, Length=513, Percent_Identity=27.6803118908382, Blast_Score=185, Evalue=9e-47, Organism=Drosophila melanogaster, GI24583749, Length=469, Percent_Identity=30.7036247334755, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI24583747, Length=469, Percent_Identity=30.7036247334755, Blast_Score=182, Evalue=4e-46, Organism=Drosophila melanogaster, GI281360393, Length=514, Percent_Identity=25.4863813229572, Blast_Score=150, Evalue=3e-36,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013780 - InterPro: IPR006047 - InterPro: IPR006589 - InterPro: IPR017853 - InterPro: IPR013781 - InterPro: IPR012810 [H]
Pfam domain/function: PF00128 Alpha-amylase [H]
EC number: =5.4.99.16 [H]
Molecular weight: Translated: 65539; Mature: 65539
Theoretical pI: Translated: 7.32; Mature: 7.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDDLWYKNAVFYCLSVGTYMDADGDGIGDFKGLTRRLDYLHGLGITAIWLMPFQPSPQR CCCCHHHHHHHEEEEECCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC DDGYDVADYYGVDPRYGTLGDFVQFTHGCKQRGIRVIIDLVVNHTSDQHPWFIDARSAKH CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCEEEECCCCCC SRYRDWYVWSDRKPANADKGMVFPGVQKTTWTRDKQAGAYYFHRFYDFQPDLNTSNPEVQ CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHEEECCCCCCCCCCCHHH AEILKIMGFWIQLGVSGFRMDAVPFVIAAKGADVKKPVEQYEMLRTFREFLQWRQGEAII HHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE LAEANVLPDTDMEYFGDDGDRMHMMFNFHVNQHLFYALAASDVRPLAKALQATKPRPAAA EEECCCCCCCCHHHHCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCHH QWGLFLRNHDELDLGRLSKPQRDAVFAAFGPDKSMQLYDRGIRRRLAPMLGGDRRRIELA HHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE YSLMFTLPGTPVIRYGDELAMGDDLKLPERNCARTPMQWSTEPHGGFTKSETAVSPVIDH EEEEEECCCCCEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPYGYEHVNAAKQRRDPDSMLNWTERIIRMRKEVPEVGWGDFQVIATKDPAVLIMRYDWR CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECC NNSVLFVHNLDEKPREISFDAGLPDDTGKLLINLLSEDHSHADDRGRHTLVLEPYGYRWY CCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEE RVGGLDYLLRRSDIETESPGKRARKGRKR EECCHHHHHHHCCCCCCCCCHHHHCCCCC >Mature Secondary Structure MIDDLWYKNAVFYCLSVGTYMDADGDGIGDFKGLTRRLDYLHGLGITAIWLMPFQPSPQR CCCCHHHHHHHEEEEECCCEECCCCCCCCHHHHHHHHHHHHHCCCEEEEEEECCCCCCCC DDGYDVADYYGVDPRYGTLGDFVQFTHGCKQRGIRVIIDLVVNHTSDQHPWFIDARSAKH CCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEEHHCCCCCCCCEEEECCCCCC SRYRDWYVWSDRKPANADKGMVFPGVQKTTWTRDKQAGAYYFHRFYDFQPDLNTSNPEVQ CCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEHEEECCCCCCCCCCCHHH AEILKIMGFWIQLGVSGFRMDAVPFVIAAKGADVKKPVEQYEMLRTFREFLQWRQGEAII HHHHHHHHHHHHHCCCCEEECCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEE LAEANVLPDTDMEYFGDDGDRMHMMFNFHVNQHLFYALAASDVRPLAKALQATKPRPAAA EEECCCCCCCCHHHHCCCCCEEEEEEEEECCCEEEEEHHHHHHHHHHHHHHHCCCCCCHH QWGLFLRNHDELDLGRLSKPQRDAVFAAFGPDKSMQLYDRGIRRRLAPMLGGDRRRIELA HHHHEECCCCCCCCCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEE YSLMFTLPGTPVIRYGDELAMGDDLKLPERNCARTPMQWSTEPHGGFTKSETAVSPVIDH EEEEEECCCCCEEECCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPYGYEHVNAAKQRRDPDSMLNWTERIIRMRKEVPEVGWGDFQVIATKDPAVLIMRYDWR CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCEEEEEEEECC NNSVLFVHNLDEKPREISFDAGLPDDTGKLLINLLSEDHSHADDRGRHTLVLEPYGYRWY CCCEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCEEE RVGGLDYLLRRSDIETESPGKRARKGRKR EECCHHHHHHHCCCCCCCCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9042362 [H]