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The map label for this gene is yccF [H]

Identifier: 146337629

GI number: 146337629

Start: 495463

End: 495852

Strand: Reverse

Name: yccF [H]

Synonym: BRADO0494

Alternate gene names: 146337629

Gene position: 495852-495463 (Counterclockwise)

Preceding gene: 146337630

Following gene: 146337628

Centisome position: 6.65

GC content: 66.92

Gene sequence:

>390_bases
TTGCTCCTCAATATCCTCTGGATCGTCTTTGGCGGCGCTTACATGGCGTTCGGCTGGCTGGTGGCGTCGGTGGTCATGGC
GATCACCATCGTCGGGCTGCCCTGGGCGCGCGCCGCCTTCAACATCGCCGCCTATACGCTGCTGCCGTTCGGCTCCCGTG
CCGTCCGCCGCGACGAGGTCACCGGCATGGAGGACGTGGGCACTGGACCGCTGGGCCTGCTCGGCAACATCATCTGGTTC
GTCCTGGCTGGCTGGTGGCTCGCACTCGGCCACCTGCTGACAGCGGTGTTTCTGGCCGTATCCATCATCGGCCTGCCGTT
CGCCTGGGTCCACCTGAAGCTCGCCGGACTGGCGGCGTGGCCGATCGGCAAGACCATCGTGCCGGCCTGA

Upstream 100 bases:

>100_bases
CGATCCACCGCCGTTCCGCGTGCCTGCCTTGAGCTGGACGGAAGGCAACCTATGTAGACGGCGTCGGAACCCGCGCAGGT
GGCCCATGCAGCCCATCTCA

Downstream 100 bases:

>100_bases
GCCCGCCTGGCGCCCCTGGATCGGGCCAGGGATCCTACTGCCCCCCTCAGAACGACCCTCGCCGGCAACCGGTCAAGGCC
GTTGCCGACCACGAGCCGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 129; Mature: 129

Protein sequence:

>129_residues
MLLNILWIVFGGAYMAFGWLVASVVMAITIVGLPWARAAFNIAAYTLLPFGSRAVRRDEVTGMEDVGTGPLGLLGNIIWF
VLAGWWLALGHLLTAVFLAVSIIGLPFAWVHLKLAGLAAWPIGKTIVPA

Sequences:

>Translated_129_residues
MLLNILWIVFGGAYMAFGWLVASVVMAITIVGLPWARAAFNIAAYTLLPFGSRAVRRDEVTGMEDVGTGPLGLLGNIIWF
VLAGWWLALGHLLTAVFLAVSIIGLPFAWVHLKLAGLAAWPIGKTIVPA
>Mature_129_residues
MLLNILWIVFGGAYMAFGWLVASVVMAITIVGLPWARAAFNIAAYTLLPFGSRAVRRDEVTGMEDVGTGPLGLLGNIIWF
VLAGWWLALGHLLTAVFLAVSIIGLPFAWVHLKLAGLAAWPIGKTIVPA

Specific function: Unknown

COG id: COG3304

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787195, Length=127, Percent_Identity=37.007874015748, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005185 [H]

Pfam domain/function: PF03733 DUF307 [H]

EC number: NA

Molecular weight: Translated: 13829; Mature: 13829

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLNILWIVFGGAYMAFGWLVASVVMAITIVGLPWARAAFNIAAYTLLPFGSRAVRRDEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHC
TGMEDVGTGPLGLLGNIIWFVLAGWWLALGHLLTAVFLAVSIIGLPFAWVHLKLAGLAAW
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PIGKTIVPA
CCCCCCCCC
>Mature Secondary Structure
MLLNILWIVFGGAYMAFGWLVASVVMAITIVGLPWARAAFNIAAYTLLPFGSRAVRRDEV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHC
TGMEDVGTGPLGLLGNIIWFVLAGWWLALGHLLTAVFLAVSIIGLPFAWVHLKLAGLAAW
CCCHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PIGKTIVPA
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 2542273; 7984428 [H]