| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337621
Identifier: 146337621
GI number: 146337621
Start: 488494
End: 489252
Strand: Reverse
Name: 146337621
Synonym: BRADO0486
Alternate gene names: NA
Gene position: 489252-488494 (Counterclockwise)
Preceding gene: 146337623
Following gene: 146337617
Centisome position: 6.56
GC content: 61.92
Gene sequence:
>759_bases ATGTGCAATCTCTACTCGATGACCAAGAATGCCGACGCCATCCGGCGGCTGTTCCGAGTAGAGCCCGAAAACGACCGGAC CGGCAATTTGCCTTCCATGCCGGGCATCTTCCCGGATTATCCGGCACCAATCGTGCGCACCGGCGCCGATGGCCGCGAAC TCGTCCTGGCGCGGTGGGGGATGCCATCGTCACAAAAGGCGCTAATGGACGCGACGAGGCGCCGCGCTGCCAAGCTCGAA GAGAAGGGCAAGCCGGTCGACTTCAAAGAGCTTCTGCGGCTCGAGCCCGACAGCGGCACGACCAACATCCGCAACGTCAA CAGCACTCATTGGAAGCGCTGGTTGATGCCGGCGAACCGCTGCCTGGTGCCGTTCACCTCGTTCAGCGAATACCACACCA TCGACGGCAAGAAGGTGCCGGTTTGGTTCGCTGCCGACGAGAGCCGGCCCCTGCTCTGTTTCGCCGGCCTGTGGACCAAC TGGACCTGTGTCCGCAAGGTCAAAGAAGGCGAGATCACCTGCAACCTCTACGGCTTCCTGACCACCGAGCCGAACGCCGT CGTGGCGCCAATCCATCCCAAGGCCATGCCGGTGATCCTGAGGACCGTCGATGAGTACGAAGTCTGGCTGCGCGCGCCTT GGGATGAGGCGAAGTTGCTACAGCGGCCACTACCTGACGATGTACTAAGCATCGTCGCCAGAGGATCGAAGGAAGACAAG GGCGCACGCTGCGGGAGTACCTGCCAGATGAGCGCTTGA
Upstream 100 bases:
>100_bases TCGGCTCTGGCGCAGCCTGGTGTGTGGCGGGCAATCGCCGGACGCGAGCGACGCTGTTACAGTTCGCGCATCATCACCGC TAGGCCGCTCCGGAGCCACT
Downstream 100 bases:
>100_bases GGCTGACCGACGTCCGAAACCTGATGGATGCAATGATCGAGGGTCTGAACTTTTAGGTTGTTTTTTCCGTTGACATACCC TCTGATGGTATTAAGATGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 252
Protein sequence:
>252_residues MCNLYSMTKNADAIRRLFRVEPENDRTGNLPSMPGIFPDYPAPIVRTGADGRELVLARWGMPSSQKALMDATRRRAAKLE EKGKPVDFKELLRLEPDSGTTNIRNVNSTHWKRWLMPANRCLVPFTSFSEYHTIDGKKVPVWFAADESRPLLCFAGLWTN WTCVRKVKEGEITCNLYGFLTTEPNAVVAPIHPKAMPVILRTVDEYEVWLRAPWDEAKLLQRPLPDDVLSIVARGSKEDK GARCGSTCQMSA
Sequences:
>Translated_252_residues MCNLYSMTKNADAIRRLFRVEPENDRTGNLPSMPGIFPDYPAPIVRTGADGRELVLARWGMPSSQKALMDATRRRAAKLE EKGKPVDFKELLRLEPDSGTTNIRNVNSTHWKRWLMPANRCLVPFTSFSEYHTIDGKKVPVWFAADESRPLLCFAGLWTN WTCVRKVKEGEITCNLYGFLTTEPNAVVAPIHPKAMPVILRTVDEYEVWLRAPWDEAKLLQRPLPDDVLSIVARGSKEDK GARCGSTCQMSA >Mature_252_residues MCNLYSMTKNADAIRRLFRVEPENDRTGNLPSMPGIFPDYPAPIVRTGADGRELVLARWGMPSSQKALMDATRRRAAKLE EKGKPVDFKELLRLEPDSGTTNIRNVNSTHWKRWLMPANRCLVPFTSFSEYHTIDGKKVPVWFAADESRPLLCFAGLWTN WTCVRKVKEGEITCNLYGFLTTEPNAVVAPIHPKAMPVILRTVDEYEVWLRAPWDEAKLLQRPLPDDVLSIVARGSKEDK GARCGSTCQMSA
Specific function: Unknown
COG id: COG2135
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28493; Mature: 28493
Theoretical pI: Translated: 8.87; Mature: 8.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCNLYSMTKNADAIRRLFRVEPENDRTGNLPSMPGIFPDYPAPIVRTGADGRELVLARWG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECC MPSSQKALMDATRRRAAKLEEKGKPVDFKELLRLEPDSGTTNIRNVNSTHWKRWLMPANR CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCCCCCCCHHHHHHCCCCCC CLVPFTSFSEYHTIDGKKVPVWFAADESRPLLCFAGLWTNWTCVRKVKEGEITCNLYGFL EEEECCCCCCEEECCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEEEE TTEPNAVVAPIHPKAMPVILRTVDEYEVWLRAPWDEAKLLQRPLPDDVLSIVARGSKEDK ECCCCEEEECCCCCHHHHHEEHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCCCCC GARCGSTCQMSA CCCCCCEEECCC >Mature Secondary Structure MCNLYSMTKNADAIRRLFRVEPENDRTGNLPSMPGIFPDYPAPIVRTGADGRELVLARWG CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCEEEEEECC MPSSQKALMDATRRRAAKLEEKGKPVDFKELLRLEPDSGTTNIRNVNSTHWKRWLMPANR CCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHEECCCCCCCCCCCCCCHHHHHHCCCCCC CLVPFTSFSEYHTIDGKKVPVWFAADESRPLLCFAGLWTNWTCVRKVKEGEITCNLYGFL EEEECCCCCCEEECCCCEEEEEEECCCCCCEEEEECCCCCCCEEEEECCCCEEEEEEEEE TTEPNAVVAPIHPKAMPVILRTVDEYEVWLRAPWDEAKLLQRPLPDDVLSIVARGSKEDK ECCCCEEEECCCCCHHHHHEEHHCCEEEEEECCCCHHHHHHCCCCHHHHHHHHCCCCCCC GARCGSTCQMSA CCCCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA