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The map label for this gene is ydgJ [C]

Identifier: 146337589

GI number: 146337589

Start: 456314

End: 457489

Strand: Reverse

Name: ydgJ [C]

Synonym: BRADO0445

Alternate gene names: 146337589

Gene position: 457489-456314 (Counterclockwise)

Preceding gene: 146337590

Following gene: 146337581

Centisome position: 6.14

GC content: 69.13

Gene sequence:

>1176_bases
ATGGCCATCACAGCAAGCCAAGAGGCCGGCCGACATGATCGCATACGCCTCGGCATGGTCGGCGGCGGACAGGGCGCGTT
CATCGGCGCCGTGCACCGCATCGCCGCACGGATCGACGACCAGTTCGAGCTGATCGCAGGCGCGCTCGCGTCCGATCCGG
CCCGCGCCAAGGCCTCGGCGAAGGAGATCGGCATCGCCGACGATCGCGCCTATGGCTCGTTCGAAGAGATGGCCCGGGCC
GAAGCCGCGCGCGCCGACGGGATCGAGGCGGTCGCGATCGTCACGCCGAACCACATGCATGCTCCCGTTGCGAAAGCTTT
CCTGCGCGCCGGCATCCACGTCATCTGCGACAAGCCGCTGACGACGACTGTCGCGGAAGCCGAGGAGCTGGTGGCGCTGG
TCCGATCGACGGGCAAGGTGTTCGTCGTGACGCACAACTACACCGGCTATCCGATGGTGCGGCAGGCGCGCGCGATGGTC
GCGAGCGGCGAACTCGGCGACATCCGCCTGGTGCAGGCGGAGTACCTGCAGGACTGGCTGACCGAGCGGCTGGAGCAGAG
CGATCACAAGCAGGCGGCGTGGCGCACCGACCCAGCGCGCTCCGGACCCGGCGGATGCATCGGCGACATCGGCACCCATG
CCTACAATCTCGCCTGCTTCGTCAGCGGCCTCGCGCTCGATGAGCTGCTCGCGCAGCTGACGACCTTCGTGCCGGGGCGG
CGCCTCGACGACGACGTCCAGATCCTGCTGCGCTGGAAGGGAGGCGCCAAGGGCATGCTGTGGGCGAGCCAGGTCGCCGT
CGGTCACGAGAACGGCCTGAGTTTGCGCATCTCCGGCAGCAAGGGCGGGCTCGAATGGGCCCAGGAGAATCCGAACCAGC
TCTGGTTCACGCCCTATGGTCGGCCCAAGCAGCTGCTCACCCGCGGTGGCGCCGGCGCGATCGGCGCGGCCGCGCGCGTC
ACCCGCATCCCCTCCGGCCACCCCGAGGGTTATCTGGAAGGCTTTGCGACCATCTATGCCGAGGCCGCGCACGCCATCCG
CGCCGCGAGAACCGGAGACAGGCCCCATCACGAGGTGCTGTTCCCGACGGTCGAGGACGGCCTGGCCGGCGTGAAGTTCA
TCGATGCGGCGGTGAGGTCGTCGGCAGCGAAGGGCGCGTGGATCCGGATCGGCTGA

Upstream 100 bases:

>100_bases
CATCGAAGTGACCGAGAAGGCATTCGATGATTTCGCCGGCTCGGGCGCCGACGACGTGGCCAACCGCAAGATGCTCGGCC
TGTCCTGAGCGGAGGAGCAG

Downstream 100 bases:

>100_bases
CGCCTTCCCGGACCACCCTGGTGATATCGATCTTCTTCGCCGCGCGGCGTGGAGGCGCGCCGCGCGTTGCGCGATGTGCA
AGGCCGCTTTCATGCCGTGG

Product: putative oxidoreductase /dehydrogenase protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 391; Mature: 390

Protein sequence:

>391_residues
MAITASQEAGRHDRIRLGMVGGGQGAFIGAVHRIAARIDDQFELIAGALASDPARAKASAKEIGIADDRAYGSFEEMARA
EAARADGIEAVAIVTPNHMHAPVAKAFLRAGIHVICDKPLTTTVAEAEELVALVRSTGKVFVVTHNYTGYPMVRQARAMV
ASGELGDIRLVQAEYLQDWLTERLEQSDHKQAAWRTDPARSGPGGCIGDIGTHAYNLACFVSGLALDELLAQLTTFVPGR
RLDDDVQILLRWKGGAKGMLWASQVAVGHENGLSLRISGSKGGLEWAQENPNQLWFTPYGRPKQLLTRGGAGAIGAAARV
TRIPSGHPEGYLEGFATIYAEAAHAIRAARTGDRPHHEVLFPTVEDGLAGVKFIDAAVRSSAAKGAWIRIG

Sequences:

>Translated_391_residues
MAITASQEAGRHDRIRLGMVGGGQGAFIGAVHRIAARIDDQFELIAGALASDPARAKASAKEIGIADDRAYGSFEEMARA
EAARADGIEAVAIVTPNHMHAPVAKAFLRAGIHVICDKPLTTTVAEAEELVALVRSTGKVFVVTHNYTGYPMVRQARAMV
ASGELGDIRLVQAEYLQDWLTERLEQSDHKQAAWRTDPARSGPGGCIGDIGTHAYNLACFVSGLALDELLAQLTTFVPGR
RLDDDVQILLRWKGGAKGMLWASQVAVGHENGLSLRISGSKGGLEWAQENPNQLWFTPYGRPKQLLTRGGAGAIGAAARV
TRIPSGHPEGYLEGFATIYAEAAHAIRAARTGDRPHHEVLFPTVEDGLAGVKFIDAAVRSSAAKGAWIRIG
>Mature_390_residues
AITASQEAGRHDRIRLGMVGGGQGAFIGAVHRIAARIDDQFELIAGALASDPARAKASAKEIGIADDRAYGSFEEMARAE
AARADGIEAVAIVTPNHMHAPVAKAFLRAGIHVICDKPLTTTVAEAEELVALVRSTGKVFVVTHNYTGYPMVRQARAMVA
SGELGDIRLVQAEYLQDWLTERLEQSDHKQAAWRTDPARSGPGGCIGDIGTHAYNLACFVSGLALDELLAQLTTFVPGRR
LDDDVQILLRWKGGAKGMLWASQVAVGHENGLSLRISGSKGGLEWAQENPNQLWFTPYGRPKQLLTRGGAGAIGAAARVT
RIPSGHPEGYLEGFATIYAEAAHAIRAARTGDRPHHEVLFPTVEDGLAGVKFIDAAVRSSAAKGAWIRIG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=301, Percent_Identity=29.5681063122924, Blast_Score=78, Evalue=1e-14,
Organism=Escherichia coli, GI87081947, Length=241, Percent_Identity=27.3858921161826, Blast_Score=79, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24581117, Length=310, Percent_Identity=24.8387096774194, Blast_Score=71, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41692; Mature: 41561

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITASQEAGRHDRIRLGMVGGGQGAFIGAVHRIAARIDDQFELIAGALASDPARAKASA
CCCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCH
KEIGIADDRAYGSFEEMARAEAARADGIEAVAIVTPNHMHAPVAKAFLRAGIHVICDKPL
HHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEECCCC
TTTVAEAEELVALVRSTGKVFVVTHNYTGYPMVRQARAMVASGELGDIRLVQAEYLQDWL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
TERLEQSDHKQAAWRTDPARSGPGGCIGDIGTHAYNLACFVSGLALDELLAQLTTFVPGR
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLDDDVQILLRWKGGAKGMLWASQVAVGHENGLSLRISGSKGGLEWAQENPNQLWFTPYG
CCCCCEEEEEEECCCCCCCEEEHHEEECCCCCEEEEEECCCCCCCHHHCCCCEEEECCCC
RPKQLLTRGGAGAIGAAARVTRIPSGHPEGYLEGFATIYAEAAHAIRAARTGDRPHHEVL
CHHHHHHCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
FPTVEDGLAGVKFIDAAVRSSAAKGAWIRIG
CCCHHCCCCHHHHHHHHHHHCCCCCCEEEEC
>Mature Secondary Structure 
AITASQEAGRHDRIRLGMVGGGQGAFIGAVHRIAARIDDQFELIAGALASDPARAKASA
CCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHCCH
KEIGIADDRAYGSFEEMARAEAARADGIEAVAIVTPNHMHAPVAKAFLRAGIHVICDKPL
HHCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCEEEECCCC
TTTVAEAEELVALVRSTGKVFVVTHNYTGYPMVRQARAMVASGELGDIRLVQAEYLQDWL
HHHHHHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHH
TERLEQSDHKQAAWRTDPARSGPGGCIGDIGTHAYNLACFVSGLALDELLAQLTTFVPGR
HHHHHHCCHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
RLDDDVQILLRWKGGAKGMLWASQVAVGHENGLSLRISGSKGGLEWAQENPNQLWFTPYG
CCCCCEEEEEEECCCCCCCEEEHHEEECCCCCEEEEEECCCCCCCHHHCCCCEEEECCCC
RPKQLLTRGGAGAIGAAARVTRIPSGHPEGYLEGFATIYAEAAHAIRAARTGDRPHHEVL
CHHHHHHCCCCCCCCHHHHHEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEE
FPTVEDGLAGVKFIDAAVRSSAAKGAWIRIG
CCCHHCCCCHHHHHHHHHHHCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]