| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is yjiJ [C]
Identifier: 146337503
GI number: 146337503
Start: 364144
End: 365340
Strand: Reverse
Name: yjiJ [C]
Synonym: BRADO0351
Alternate gene names: 146337503
Gene position: 365340-364144 (Counterclockwise)
Preceding gene: 146337505
Following gene: 146337499
Centisome position: 4.9
GC content: 69.76
Gene sequence:
>1197_bases TTGCCAACCCCGCCTTCCGACACGACGCCGGCCCATCCGGCGTTGACCAATCTGACGCTGTCGCTCGGGCCGATCATCGG GCTTGGCATCGGCCGCTTCGCCTATGCGCTGGTGCTGCCCGACATGCGGGAGACGCTGCACTGGTCGTATTCAGCGGCGG GCTTCATGAATACCGTGAACGCCGCCGGCTACCTGATCGGCGCGCTGATCGCATCGCAGACGGCCCGCCGCTTCGGCGCC CTCGCCGCGGTGCGCGGCGGCACGTTGGCGGCGCTGGCCTCGCTCGTGGTCTGTGCGACGACCGGCGACTTCGTTGCACT CAGCCTGGCACGTCTCGTGACCGGAATCGGCGCCGGCGTCGCACTCGTGGCCGGTGGCGCGCTGGCGGCGCGGGTCGCAT TGGCGCGGCCGGCGCAGGCGAGCTTCGTGCTGAGCCTGTTCTATGCCGGGCCGCCGCTCGGCATCGTCATCTCCGGGCTG ATCGCGCCGTTCGTGCTGCAGGCCTTCGGGCCGGGATCGTGGTGGATCGTGTGGGCGGTGCTCGCTTGTGTGGGCGCGGT TCTGATCGTGCCGCTGCTCCTGACGCGGCTGCCATCGAACGCGACCGCGCCGGAGACGCGCGCCGACCGCGTCTCGCTGC GGCCGATGGCGATCTATCTGTTCGGCTACTTCCTCTATGGCGCCGGCTACATCGCCTATCTGACCTTCATGATCGCCTAT GTACGCGATCTCGGCGGCGGCGCCGCGGCACAATCCGGCTTCTGGTGCCTGATCGGGCTGGCCGGGTTCGCCACGCCCTG GGTGTGGCGCCGCGTGCTGGCGCTCGACCGCGGCGGCTGGCCGACCGCGCTCATCCTGACGATCAACGCGATCGGCGCCG CCCTGCCCGCGCTCAGCCATTCGCCGATCATGCTGACCTTGTCGGCCGCCGTGTTCGGTATCGCCTTCTCGACGGTGACC ACGGCGACGACGGCGTTCGTCCGCTTCAACCTGCCGCAAGCCGCCTGGCCGCGCGCGATCGCGGCGCTGACGATCTCGTT CGGCGTCGGGCAGACGCTTGGGCCTTTCGCCGTCGGCGCGATCACCGATGCGATGGGGAGTTTGACCTATGCATTGAACG TGTCGGCGGCGTTGCTGCTGCTCGGCGCGGTGATGGCGGCGATGCAGGGCAAGTTGAAGCGCACCGGCCGGGCCTAA
Upstream 100 bases:
>100_bases CGGGGCACGTCTTCTGTCGCGGGCGGGCGAGCGATAATGTGCTTGAAAATCGCCGCCGAGCAGCAGGATTTGCCGGCCGA TCGCCGCGCCGGAGCATGTC
Downstream 100 bases:
>100_bases AAAACGGTGTCGTCCCGGCGAACGCCGGGACCCATACCGCGGAAGCTATCGAGGAACGTTGCTGGCAGTTACCTGCCTCA CCACGGCCGGTGGTTATGGG
Product: major facilitator superfamily permease
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Transporter; Permease Of Facilitator Superfamily
Number of amino acids: Translated: 398; Mature: 397
Protein sequence:
>398_residues MPTPPSDTTPAHPALTNLTLSLGPIIGLGIGRFAYALVLPDMRETLHWSYSAAGFMNTVNAAGYLIGALIASQTARRFGA LAAVRGGTLAALASLVVCATTGDFVALSLARLVTGIGAGVALVAGGALAARVALARPAQASFVLSLFYAGPPLGIVISGL IAPFVLQAFGPGSWWIVWAVLACVGAVLIVPLLLTRLPSNATAPETRADRVSLRPMAIYLFGYFLYGAGYIAYLTFMIAY VRDLGGGAAAQSGFWCLIGLAGFATPWVWRRVLALDRGGWPTALILTINAIGAALPALSHSPIMLTLSAAVFGIAFSTVT TATTAFVRFNLPQAAWPRAIAALTISFGVGQTLGPFAVGAITDAMGSLTYALNVSAALLLLGAVMAAMQGKLKRTGRA
Sequences:
>Translated_398_residues MPTPPSDTTPAHPALTNLTLSLGPIIGLGIGRFAYALVLPDMRETLHWSYSAAGFMNTVNAAGYLIGALIASQTARRFGA LAAVRGGTLAALASLVVCATTGDFVALSLARLVTGIGAGVALVAGGALAARVALARPAQASFVLSLFYAGPPLGIVISGL IAPFVLQAFGPGSWWIVWAVLACVGAVLIVPLLLTRLPSNATAPETRADRVSLRPMAIYLFGYFLYGAGYIAYLTFMIAY VRDLGGGAAAQSGFWCLIGLAGFATPWVWRRVLALDRGGWPTALILTINAIGAALPALSHSPIMLTLSAAVFGIAFSTVT TATTAFVRFNLPQAAWPRAIAALTISFGVGQTLGPFAVGAITDAMGSLTYALNVSAALLLLGAVMAAMQGKLKRTGRA >Mature_397_residues PTPPSDTTPAHPALTNLTLSLGPIIGLGIGRFAYALVLPDMRETLHWSYSAAGFMNTVNAAGYLIGALIASQTARRFGAL AAVRGGTLAALASLVVCATTGDFVALSLARLVTGIGAGVALVAGGALAARVALARPAQASFVLSLFYAGPPLGIVISGLI APFVLQAFGPGSWWIVWAVLACVGAVLIVPLLLTRLPSNATAPETRADRVSLRPMAIYLFGYFLYGAGYIAYLTFMIAYV RDLGGGAAAQSGFWCLIGLAGFATPWVWRRVLALDRGGWPTALILTINAIGAALPALSHSPIMLTLSAAVFGIAFSTVTT ATTAFVRFNLPQAAWPRAIAALTISFGVGQTLGPFAVGAITDAMGSLTYALNVSAALLLLGAVMAAMQGKLKRTGRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Integral Membrane Protein [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790788, Length=370, Percent_Identity=29.1891891891892, Blast_Score=63, Evalue=3e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40950; Mature: 40819
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPPSDTTPAHPALTNLTLSLGPIIGLGIGRFAYALVLPDMRETLHWSYSAAGFMNTVN CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AAGYLIGALIASQTARRFGALAAVRGGTLAALASLVVCATTGDFVALSLARLVTGIGAGV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH ALVAGGALAARVALARPAQASFVLSLFYAGPPLGIVISGLIAPFVLQAFGPGSWWIVWAV HHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH LACVGAVLIVPLLLTRLPSNATAPETRADRVSLRPMAIYLFGYFLYGAGYIAYLTFMIAY HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VRDLGGGAAAQSGFWCLIGLAGFATPWVWRRVLALDRGGWPTALILTINAIGAALPALSH HHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCC SPIMLTLSAAVFGIAFSTVTTATTAFVRFNLPQAAWPRAIAALTISFGVGQTLGPFAVGA CCEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH ITDAMGSLTYALNVSAALLLLGAVMAAMQGKLKRTGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PTPPSDTTPAHPALTNLTLSLGPIIGLGIGRFAYALVLPDMRETLHWSYSAAGFMNTVN CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH AAGYLIGALIASQTARRFGALAAVRGGTLAALASLVVCATTGDFVALSLARLVTGIGAGV HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCH ALVAGGALAARVALARPAQASFVLSLFYAGPPLGIVISGLIAPFVLQAFGPGSWWIVWAV HHHHCHHHHHHHHHCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHH LACVGAVLIVPLLLTRLPSNATAPETRADRVSLRPMAIYLFGYFLYGAGYIAYLTFMIAY HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH VRDLGGGAAAQSGFWCLIGLAGFATPWVWRRVLALDRGGWPTALILTINAIGAALPALSH HHHCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEHHHHHHHHHCCCC SPIMLTLSAAVFGIAFSTVTTATTAFVRFNLPQAAWPRAIAALTISFGVGQTLGPFAVGA CCEEEEHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHCCCCCCCHHHHHH ITDAMGSLTYALNVSAALLLLGAVMAAMQGKLKRTGRA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA