Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337501
Identifier: 146337501
GI number: 146337501
Start: 362552
End: 363181
Strand: Direct
Name: 146337501
Synonym: BRADO0349
Alternate gene names: NA
Gene position: 362552-363181 (Clockwise)
Preceding gene: 146337500
Following gene: 146337502
Centisome position: 4.86
GC content: 63.17
Gene sequence:
>630_bases ATGTCCAGCATCACTGCCTCTGAGACGACGATCGTCAGCCCGCAGACCAGACTGATCCAGCCGGCCTGGGTGCGCGTCAT GCACTGGATCAACGCCGTGGCGATGATCATGATGATCATGTCGGGCTGGCAGATCTACAACGCCTCGCCGCTGTTCGACT TCCGCTTCGACCGCAGCATCACGCTCGGCGGCTGGCTCGGCGGCGCGCTGCTGTGGCACTTCGCCGCGATGTGGCTGTTG ATGCTCAACGGTCTCGCCTATCTGGTCACCGGCCTGATCACCGGCCGGTTCCGCCGCAAGCTGCTGCCGATCTCGCCGGC TTCCGTGATTGCCGACCTCAAGGCGGCGCTGACCTTCAAGCTGTCGCATGACGATCTCTCCGCCTACAACGCGGTACAGA AGCTGCTCTATCTCGGCATCATCCTGGTCGGCATCGTCGTCGTGCTCACGGGGCTCTCGATGTGGAAGCCGGTGCAGCTG CACTGGCTGGTGACGCTTTTCGGCGACTATCCGGCGGCGCGCTACGTGCATTTCGTCTGCATGGCGCTGATCTGCGCTTT CCTGGTGATCCACATCGTGCTCGCGCTCCTGGTGCCGAAGAGCCTGCGCGCGATGATCATCGGCCGCTAA
Upstream 100 bases:
>100_bases CCGCCAAGCATCGATTTGCCGGTTTGAGCCCGTAACGGGCGGTCAGTCTTTGGCGTATATCTGATTGGAACCTCGAGCCC CCCGAACCACCGAGCCCGTC
Downstream 100 bases:
>100_bases GAGGAGAGACCATCATGGCCAAGCGTCCGTTCCTGATTCCCGGCGTCGACAAGCGGCTGCTGATCAAGGATTCGATCAAG GCGATGCCCGATCTCACCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Cytochrome B; Transmembrane Hydrogenase Cytochrome B-Type Subunit; HupC/HyaC/HydC Family Protein; Thiosulfate Reductase Cytochrome Subunit B; Thiosulfate Reductase Cytochrome B Subunit-Like Protein; Transmembrane Hydrogenase Cytochrome B- Type Subunit; Cytochrome; Conserved Protein; B-Type Cytochomre; Transmembrane Hydrogenase Cytochrome
Number of amino acids: Translated: 209; Mature: 208
Protein sequence:
>209_residues MSSITASETTIVSPQTRLIQPAWVRVMHWINAVAMIMMIMSGWQIYNASPLFDFRFDRSITLGGWLGGALLWHFAAMWLL MLNGLAYLVTGLITGRFRRKLLPISPASVIADLKAALTFKLSHDDLSAYNAVQKLLYLGIILVGIVVVLTGLSMWKPVQL HWLVTLFGDYPAARYVHFVCMALICAFLVIHIVLALLVPKSLRAMIIGR
Sequences:
>Translated_209_residues MSSITASETTIVSPQTRLIQPAWVRVMHWINAVAMIMMIMSGWQIYNASPLFDFRFDRSITLGGWLGGALLWHFAAMWLL MLNGLAYLVTGLITGRFRRKLLPISPASVIADLKAALTFKLSHDDLSAYNAVQKLLYLGIILVGIVVVLTGLSMWKPVQL HWLVTLFGDYPAARYVHFVCMALICAFLVIHIVLALLVPKSLRAMIIGR >Mature_208_residues SSITASETTIVSPQTRLIQPAWVRVMHWINAVAMIMMIMSGWQIYNASPLFDFRFDRSITLGGWLGGALLWHFAAMWLLM LNGLAYLVTGLITGRFRRKLLPISPASVIADLKAALTFKLSHDDLSAYNAVQKLLYLGIILVGIVVVLTGLSMWKPVQLH WLVTLFGDYPAARYVHFVCMALICAFLVIHIVLALLVPKSLRAMIIGR
Specific function: Unknown
COG id: COG4117
COG function: function code C; Thiosulfate reductase cytochrome B subunit (membrane anchoring protein)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23355; Mature: 23223
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSITASETTIVSPQTRLIQPAWVRVMHWINAVAMIMMIMSGWQIYNASPLFDFRFDRSI CCCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCE TLGGWLGGALLWHFAAMWLLMLNGLAYLVTGLITGRFRRKLLPISPASVIADLKAALTFK EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEE LSHDDLSAYNAVQKLLYLGIILVGIVVVLTGLSMWKPVQLHWLVTLFGDYPAARYVHFVC ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH MALICAFLVIHIVLALLVPKSLRAMIIGR HHHHHHHHHHHHHHHHHCCHHHHHHHCCC >Mature Secondary Structure SSITASETTIVSPQTRLIQPAWVRVMHWINAVAMIMMIMSGWQIYNASPLFDFRFDRSI CCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCE TLGGWLGGALLWHFAAMWLLMLNGLAYLVTGLITGRFRRKLLPISPASVIADLKAALTFK EEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHEE LSHDDLSAYNAVQKLLYLGIILVGIVVVLTGLSMWKPVQLHWLVTLFGDYPAARYVHFVC ECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHH MALICAFLVIHIVLALLVPKSLRAMIIGR HHHHHHHHHHHHHHHHHCCHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA