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The map label for this gene is 146337498

Identifier: 146337498

GI number: 146337498

Start: 359749

End: 360936

Strand: Direct

Name: 146337498

Synonym: BRADO0345

Alternate gene names: NA

Gene position: 359749-360936 (Clockwise)

Preceding gene: 146337495

Following gene: 146337500

Centisome position: 4.82

GC content: 68.6

Gene sequence:

>1188_bases
ATGATGGACCAGCAGAATTTCGAGAGTCCCAGGGTCGGCCCGGCCGACGCCGAGGTGGCGCTCGCGAAGGCGCTGGGCCA
GTGGCCGCCCAAGCCGGGGCGCCGCAAGCTGACGCTGAAGGACTTGGCGCATGCCAAAACCGCCCATGCGCAGGCCAATG
CCAAGACCACGGTCGAGGAACTGGCCAAGCGGATCGGATTGAAGCTGGGCGACCAGTCGGAGCTGACGATCCGCCGCATC
AAGCGCGGCAAAAGCTACAGCTTCATCCGCGCCAACGGCACCCAGATCCGCCACGCCGGCACCATCCGCCGCCTGCACGC
GATGGCGGTGCCGCCGGCCTATCGCGAGGTGCGTTACGCACCCGATCCGAGCCTGCATCTCCAGGCGGTCGGCATCGATG
CCGCCGGCCGGCTGCAATATCGCTATCACGCCGACTGGGAGAAGGTGCGCGAGCATCGCAAGGCGCATCGTCTCGCCAAG
CTGGTCGGCGCGCTGCCGCGCATCCGCCGTGCGGTGTCCAAGCATCTCGCCGGCGACGCGCCGACGCGCGAATTCGCGCT
CGCCGCCGTGATCGAGCTGATCGCGCGCACCGCGATCCGTCCCGGCAGCGAGTCCTATGCGCGCCTCAACGGCACCCGCG
GCGCCGCGACGCTGCTGAAGTCGAACGTGCTTCTGGAAGACGACTGCCTGGTGCTGACCTTCAAGGCCAAGGGCGGCAAG
GCGGTGCGCAAGGAATGCGACGCCGCCAAGCTGGTGCGTGCGGTCGGCGTCCTGCGCGGCCTGCCCGGCCGGCGCATGTT
CCAGTATCGCGACGCCCAGGGCGTAGTGCGCGCGGTGTCGACCACGCAGGTGAATGCGTTCCTGCGCGAGATCGCCGGGA
TCAAGATCTCGGCCAAGGATTTCCGCACGCTGATGGCTTCGGCGGTCGCGCTGGAGACGTTGTCGCGGATCACGCCGGCG
GAAAGCGCGCGCGGCCGCAAGAAGCAGATCCTCGAGGCGATCCGTGCCGCGGCCGACGAGCTCACCAACACGCCGGCGAT
CTGCCGCAAGAGCTACGTGCACGACACCATCGTGACGGCGTTCGAGGACGGCATTCTCGAGCGCTTCGCCGCCACCATGA
AGGGCCAGCGCTCGCAGACGAAACGCGAGCAACTGCTGGCGCAGGTGGTGACGGCCGTGTCGGCCTGA

Upstream 100 bases:

>100_bases
GACGTCCTAAATCGCCTCCAAGCTGTGGATAACCCGCCCGGAACCAAACCGCGGGCCGAGGCATTGAGCGGATGAACACG
ACGGCAGGGCGTCTAAAGCA

Downstream 100 bases:

>100_bases
TACCGCAAACCGCTAGACCTGGCAGCGCGGGCCGATCTTGGCCGACGCCAGAAAGCGCGCGATCGGATCGAGCGCCTTGC
AGGACGCCGCCGCGCGCTTG

Product: putative -like DNA topoisomerase I

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MMDQQNFESPRVGPADAEVALAKALGQWPPKPGRRKLTLKDLAHAKTAHAQANAKTTVEELAKRIGLKLGDQSELTIRRI
KRGKSYSFIRANGTQIRHAGTIRRLHAMAVPPAYREVRYAPDPSLHLQAVGIDAAGRLQYRYHADWEKVREHRKAHRLAK
LVGALPRIRRAVSKHLAGDAPTREFALAAVIELIARTAIRPGSESYARLNGTRGAATLLKSNVLLEDDCLVLTFKAKGGK
AVRKECDAAKLVRAVGVLRGLPGRRMFQYRDAQGVVRAVSTTQVNAFLREIAGIKISAKDFRTLMASAVALETLSRITPA
ESARGRKKQILEAIRAAADELTNTPAICRKSYVHDTIVTAFEDGILERFAATMKGQRSQTKREQLLAQVVTAVSA

Sequences:

>Translated_395_residues
MMDQQNFESPRVGPADAEVALAKALGQWPPKPGRRKLTLKDLAHAKTAHAQANAKTTVEELAKRIGLKLGDQSELTIRRI
KRGKSYSFIRANGTQIRHAGTIRRLHAMAVPPAYREVRYAPDPSLHLQAVGIDAAGRLQYRYHADWEKVREHRKAHRLAK
LVGALPRIRRAVSKHLAGDAPTREFALAAVIELIARTAIRPGSESYARLNGTRGAATLLKSNVLLEDDCLVLTFKAKGGK
AVRKECDAAKLVRAVGVLRGLPGRRMFQYRDAQGVVRAVSTTQVNAFLREIAGIKISAKDFRTLMASAVALETLSRITPA
ESARGRKKQILEAIRAAADELTNTPAICRKSYVHDTIVTAFEDGILERFAATMKGQRSQTKREQLLAQVVTAVSA
>Mature_395_residues
MMDQQNFESPRVGPADAEVALAKALGQWPPKPGRRKLTLKDLAHAKTAHAQANAKTTVEELAKRIGLKLGDQSELTIRRI
KRGKSYSFIRANGTQIRHAGTIRRLHAMAVPPAYREVRYAPDPSLHLQAVGIDAAGRLQYRYHADWEKVREHRKAHRLAK
LVGALPRIRRAVSKHLAGDAPTREFALAAVIELIARTAIRPGSESYARLNGTRGAATLLKSNVLLEDDCLVLTFKAKGGK
AVRKECDAAKLVRAVGVLRGLPGRRMFQYRDAQGVVRAVSTTQVNAFLREIAGIKISAKDFRTLMASAVALETLSRITPA
ESARGRKKQILEAIRAAADELTNTPAICRKSYVHDTIVTAFEDGILERFAATMKGQRSQTKREQLLAQVVTAVSA

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 5.99.1.2

Molecular weight: Translated: 43405; Mature: 43405

Theoretical pI: Translated: 11.21; Mature: 11.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDQQNFESPRVGPADAEVALAKALGQWPPKPGRRKLTLKDLAHAKTAHAQANAKTTVEE
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHH
LAKRIGLKLGDQSELTIRRIKRGKSYSFIRANGTQIRHAGTIRRLHAMAVPPAYREVRYA
HHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHCCCC
PDPSLHLQAVGIDAAGRLQYRYHADWEKVREHRKAHRLAKLVGALPRIRRAVSKHLAGDA
CCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTREFALAAVIELIARTAIRPGSESYARLNGTRGAATLLKSNVLLEDDCLVLTFKAKGGK
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCEEECCEEEEEEECCCCH
AVRKECDAAKLVRAVGVLRGLPGRRMFQYRDAQGVVRAVSTTQVNAFLREIAGIKISAKD
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHH
FRTLMASAVALETLSRITPAESARGRKKQILEAIRAAADELTNTPAICRKSYVHDTIVTA
HHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FEDGILERFAATMKGQRSQTKREQLLAQVVTAVSA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MMDQQNFESPRVGPADAEVALAKALGQWPPKPGRRKLTLKDLAHAKTAHAQANAKTTVEE
CCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHH
LAKRIGLKLGDQSELTIRRIKRGKSYSFIRANGTQIRHAGTIRRLHAMAVPPAYREVRYA
HHHHHCCCCCCCCHHHHHHHHCCCCEEEEECCCCEEHHHHHHHHHHHHCCCCHHHHCCCC
PDPSLHLQAVGIDAAGRLQYRYHADWEKVREHRKAHRLAKLVGALPRIRRAVSKHLAGDA
CCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PTREFALAAVIELIARTAIRPGSESYARLNGTRGAATLLKSNVLLEDDCLVLTFKAKGGK
CHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHHHHHHCCCEEECCEEEEEEECCCCH
AVRKECDAAKLVRAVGVLRGLPGRRMFQYRDAQGVVRAVSTTQVNAFLREIAGIKISAKD
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECHHH
FRTLMASAVALETLSRITPAESARGRKKQILEAIRAAADELTNTPAICRKSYVHDTIVTA
HHHHHHHHHHHHHHHHCCCCHHCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
FEDGILERFAATMKGQRSQTKREQLLAQVVTAVSA
HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA