| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337489
Identifier: 146337489
GI number: 146337489
Start: 345883
End: 347289
Strand: Reverse
Name: 146337489
Synonym: BRADO0335
Alternate gene names: NA
Gene position: 347289-345883 (Counterclockwise)
Preceding gene: 146337490
Following gene: 146337487
Centisome position: 4.66
GC content: 68.87
Gene sequence:
>1407_bases GTGAACTTGCGCAGATTATTTGTCGGCCTTCTGGTGTTCGCGGGTCTGCTGGTGGCGGGCTGGCTCACCTATCGGCCCGA TCGCGCGCTGCGCGCCGCCACGACCGCGGTCGCCGAGATCATCTGCGCCAAGACCTTCGTCTCCGGCCTCGATCCGCAAA CCACCTTTGCCGAGACCATGGAGCGCCCCGGCCTCCGCCGCTTGCGCGCTGTGATGCGCTATCGGGTCGAGCCCGACATG CGGGTCGTCGACGCCTCGCTGCTCGGCCTGCATGCGAGCCGCGCATCCTATCATGACGGCCTCGGCTGCGTCTCGTTGCA GGGCCAGAAGCCGCCTTACGTGCCGCACAGCGACATCAACGCGCTGCGCGGCGGCGGCCCGGCAGCCGCCCTCCCCGATT TCGCGGACGCGAACCCCGTCGAGCCGGCCAACCCCGCCCTCAAGGCGGCGCTCGATCACGCCTTCGAGGAGCCGGCCGCT CCGCCGCTCCGCCGCACCAAGGCGGTCGTCGTCATCAAGGACGGCCGGCTGATCGCCGAGCGCTATGCGCCGGGAATTGG AGTCGAGACGCCGCTGATGGGATTCTCGATGACCAAGACGGTCACAAACGCGCTGCTCGGCATTCTCACCCGCCAGGGTA AGCTCAGCCCATCCATCCAGGCACCGGTCCCGGAATGGCGCGACCCCGGCGATGGCCGGCACGAGATCACGATCGAGCAG CTGATGCGCATGACATCGGGCCTGGCGCTGGACGAGACCAATTCGGGATTCGATGCATCGAGCCAGATGGCGATCCATCG CGACATGGCCGCCTTCGCCGTTCATGCGCCGCCGATCGCGCCGCCCGGGCAGCGCTGGGCCTATTCGAGCGCGTCGACGC AGATCCTGGCCCGCATCATCCGCGATGCTGCCGGCGGTCCGGAGCAGACCATCGAGCTCGCCTGGCGCGAGTTGTTCAAC CCGCTCGGCATGCGCCACGTCACCTTGCAATATGACGGCACCGGCACGCTGCAGGGCTTTGGCAACATGCTGGCCAGCGC GCGCGACTGGGCGAGGCTGGGGCTGCTCTATCTCGGCGACGGCGTGGTCGGCGGCCAGCGCATCCTGCCCGAAGGCTGGG TGGCAATGTCGGCGACCGCGACGCTCGACACCGATTATGGCGCCGGCCTCTGGACCAATCGAAGCCAGCAGATTCACGCG CAGGGGCGTGCCCGCGCTGGCATTCCCGCTGACGCCCTCTTCGCCTTCGGCCTGCTCGGCCAGCGCCTTGTGATCATGCC GAGCCAGCACATGGTGGTGGCCAGGCTCGGCGATTCGGTCGATCCGGACGGCGACATCAAGGGCGTCGCCCGGCTGGTGC GCGAGGTGATCGCCGCGACCGCGGCGCCGGCGACGGCCGCGAAATAA
Upstream 100 bases:
>100_bases CGTTCCATGGCGTCGCTCCGTTGGCGAGGTGTCCGAGCCGGGTTAGAACACGTCTAGGGCGCCACGCGGCGGAGCCTGCT CGACGATTTCAGGCGTTCTG
Downstream 100 bases:
>100_bases CGCTCAGCGGCCGATTTCGTACGGGCCGCCCTTCTCAAGCGCGATCTTGTAGGCCGGCCGCGCCTCGATGCGGGCGAGCC AGTCCATGGCGCGCGGGTGG
Product: putative beta-lactamase
Products: NA
Alternate protein names: 6-Aminohexanoate-Dimer Hydrolase; Beta-Lactamase Family Protein; 6-Aminohexanoate-Dimer Hydrolase Protein; Beta-Lactamase Class C; Hydrolase Transmembrane Protein; Beta-Lactamase Class C Family Protein; Secreted Beta-Lactamase Family Protein; Hydrolase; Beta-Lactamase Class C Protein; Exported 6-Aminohexanoate-Dimer Hydrolase Protein; Hydrolatse Transmembrane Protein
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MNLRRLFVGLLVFAGLLVAGWLTYRPDRALRAATTAVAEIICAKTFVSGLDPQTTFAETMERPGLRRLRAVMRYRVEPDM RVVDASLLGLHASRASYHDGLGCVSLQGQKPPYVPHSDINALRGGGPAAALPDFADANPVEPANPALKAALDHAFEEPAA PPLRRTKAVVVIKDGRLIAERYAPGIGVETPLMGFSMTKTVTNALLGILTRQGKLSPSIQAPVPEWRDPGDGRHEITIEQ LMRMTSGLALDETNSGFDASSQMAIHRDMAAFAVHAPPIAPPGQRWAYSSASTQILARIIRDAAGGPEQTIELAWRELFN PLGMRHVTLQYDGTGTLQGFGNMLASARDWARLGLLYLGDGVVGGQRILPEGWVAMSATATLDTDYGAGLWTNRSQQIHA QGRARAGIPADALFAFGLLGQRLVIMPSQHMVVARLGDSVDPDGDIKGVARLVREVIAATAAPATAAK
Sequences:
>Translated_468_residues MNLRRLFVGLLVFAGLLVAGWLTYRPDRALRAATTAVAEIICAKTFVSGLDPQTTFAETMERPGLRRLRAVMRYRVEPDM RVVDASLLGLHASRASYHDGLGCVSLQGQKPPYVPHSDINALRGGGPAAALPDFADANPVEPANPALKAALDHAFEEPAA PPLRRTKAVVVIKDGRLIAERYAPGIGVETPLMGFSMTKTVTNALLGILTRQGKLSPSIQAPVPEWRDPGDGRHEITIEQ LMRMTSGLALDETNSGFDASSQMAIHRDMAAFAVHAPPIAPPGQRWAYSSASTQILARIIRDAAGGPEQTIELAWRELFN PLGMRHVTLQYDGTGTLQGFGNMLASARDWARLGLLYLGDGVVGGQRILPEGWVAMSATATLDTDYGAGLWTNRSQQIHA QGRARAGIPADALFAFGLLGQRLVIMPSQHMVVARLGDSVDPDGDIKGVARLVREVIAATAAPATAAK >Mature_468_residues MNLRRLFVGLLVFAGLLVAGWLTYRPDRALRAATTAVAEIICAKTFVSGLDPQTTFAETMERPGLRRLRAVMRYRVEPDM RVVDASLLGLHASRASYHDGLGCVSLQGQKPPYVPHSDINALRGGGPAAALPDFADANPVEPANPALKAALDHAFEEPAA PPLRRTKAVVVIKDGRLIAERYAPGIGVETPLMGFSMTKTVTNALLGILTRQGKLSPSIQAPVPEWRDPGDGRHEITIEQ LMRMTSGLALDETNSGFDASSQMAIHRDMAAFAVHAPPIAPPGQRWAYSSASTQILARIIRDAAGGPEQTIELAWRELFN PLGMRHVTLQYDGTGTLQGFGNMLASARDWARLGLLYLGDGVVGGQRILPEGWVAMSATATLDTDYGAGLWTNRSQQIHA QGRARAGIPADALFAFGLLGQRLVIMPSQHMVVARLGDSVDPDGDIKGVARLVREVIAATAAPATAAK
Specific function: Unknown
COG id: COG1680
COG function: function code V; Beta-lactamase class C and other penicillin binding proteins
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50105; Mature: 50105
Theoretical pI: Translated: 9.00; Mature: 9.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNLRRLFVGLLVFAGLLVAGWLTYRPDRALRAATTAVAEIICAKTFVSGLDPQTTFAETM CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ERPGLRRLRAVMRYRVEPDMRVVDASLLGLHASRASYHDGLGCVSLQGQKPPYVPHSDIN HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCH ALRGGGPAAALPDFADANPVEPANPALKAALDHAFEEPAAPPLRRTKAVVVIKDGRLIAE HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEHH RYAPGIGVETPLMGFSMTKTVTNALLGILTRQGKLSPSIQAPVPEWRDPGDGRHEITIEQ HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHH LMRMTSGLALDETNSGFDASSQMAIHRDMAAFAVHAPPIAPPGQRWAYSSASTQILARII HHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH RDAAGGPEQTIELAWRELFNPLGMRHVTLQYDGTGTLQGFGNMLASARDWARLGLLYLGD HHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECC GVVGGQRILPEGWVAMSATATLDTDYGAGLWTNRSQQIHAQGRARAGIPADALFAFGLLG CCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHC QRLVIMPSQHMVVARLGDSVDPDGDIKGVARLVREVIAATAAPATAAK CEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MNLRRLFVGLLVFAGLLVAGWLTYRPDRALRAATTAVAEIICAKTFVSGLDPQTTFAETM CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH ERPGLRRLRAVMRYRVEPDMRVVDASLLGLHASRASYHDGLGCVSLQGQKPPYVPHSDIN HCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCCCCCCH ALRGGGPAAALPDFADANPVEPANPALKAALDHAFEEPAAPPLRRTKAVVVIKDGRLIAE HHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCEEEHH RYAPGIGVETPLMGFSMTKTVTNALLGILTRQGKLSPSIQAPVPEWRDPGDGRHEITIEQ HCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEHHHH LMRMTSGLALDETNSGFDASSQMAIHRDMAAFAVHAPPIAPPGQRWAYSSASTQILARII HHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCCCCHHHHHHHHHH RDAAGGPEQTIELAWRELFNPLGMRHVTLQYDGTGTLQGFGNMLASARDWARLGLLYLGD HHHCCCHHHHHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHEECC GVVGGQRILPEGWVAMSATATLDTDYGAGLWTNRSQQIHAQGRARAGIPADALFAFGLLG CCCCCCEECCCCCEEEEEEEEECCCCCCCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHC QRLVIMPSQHMVVARLGDSVDPDGDIKGVARLVREVIAATAAPATAAK CEEEEECCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA