Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is efeU [H]
Identifier: 146337474
GI number: 146337474
Start: 329271
End: 330101
Strand: Direct
Name: efeU [H]
Synonym: BRADO0319
Alternate gene names: 146337474
Gene position: 329271-330101 (Clockwise)
Preceding gene: 146337473
Following gene: 146337480
Centisome position: 4.42
GC content: 66.79
Gene sequence:
>831_bases ATGCTTGCCGCGTTGATCATCGTCTTCCGTGAAGTCTTTGAAGCCGGCCTCATCGTCGGCATCGTGCTGGCGGTCACCAG CGCGGTGCCGCATCGGCTGCGCTGGATCGGCGCCGGACTGTTTGCCGGGCTCGTCGGTGCCTGCATCGTTGCGGCCTTTG CCGGCACGCTGACGCAGTTGTTCGAAGGCATGGGGCAGGAGGTCTTCAACGCGGCGATCCTCTCCACTGCCGTGATCATG CTGACCTGGCACAATGTCTGGATGGCCCGGCACGGCCGCGAGATGGCGAACGAGCTGCGCACCATGGGCCAGGCCGTCGC CGAAGGCGCCAAGCCGCTGGTTGCGCTCGCCACCGTCATTGCGATCGCCGTGCTGCGTGAAGGCAGCGAGGTGGCGCTGT TTCTCTATGGCGTGGCAGCCTCGGATGAGGGCGGCGGCCGCGCGCTGCTCGGCGGCGGCGTGCTTGGCCTGCTGCTCGGC GTGGCCGTGTGTCTTGCGACCTATCTCGGCCTGATGCGCATTCCCCCGCGCGCGCTGTTTCGGACCACCACGGTTCTGAT CACCTTGCTATCGGCTGGCATGGCGGCCCAGGCCGTCTTCTTCCTCGCACGCGCCAACTGGCTCACCTCGTTCGATCAGG TGATGTGGGATTCGAGCTCGGTTTTGCCGGAAAAGGGGCTGGCCGGACGGACGCTGAAGGCGCTGATCGGCTACACCGAT CAGCCCACGGCCATGCAGCTTGCGGTCTATGTCGGGGTGATCGTGGCGACGATCGCGTTGATGCGGCTCACAGCGACGCC GCCGCGGCCGCGCGCGATGGCGGCGGAGTAA
Upstream 100 bases:
>100_bases GTGCTCAACGTGCGTGCGATGAAATCGGGCCGCTACGAGTTCTACAACGACTTCAACGAAAAAGCCCGCGGCTTCGTCAT CGTGCAATAGGTCCGCTCCC
Downstream 100 bases:
>100_bases TCGCTCGCGTGCTTACTGGAGAGGCGGATCGCCCGAGGTCCGCTTTTTTGCGAGATCCATCTCGGTGACGGCGACCAGGA TCTCGGCGCGGGTCTTCAGG
Product: putative high-affinity Fe2+/Pb2+ permease
Products: NA
Alternate protein names: Fe(2+) ion permease efeU; Ferrous iron uptake protein [H]
Number of amino acids: Translated: 276; Mature: 276
Protein sequence:
>276_residues MLAALIIVFREVFEAGLIVGIVLAVTSAVPHRLRWIGAGLFAGLVGACIVAAFAGTLTQLFEGMGQEVFNAAILSTAVIM LTWHNVWMARHGREMANELRTMGQAVAEGAKPLVALATVIAIAVLREGSEVALFLYGVAASDEGGGRALLGGGVLGLLLG VAVCLATYLGLMRIPPRALFRTTTVLITLLSAGMAAQAVFFLARANWLTSFDQVMWDSSSVLPEKGLAGRTLKALIGYTD QPTAMQLAVYVGVIVATIALMRLTATPPRPRAMAAE
Sequences:
>Translated_276_residues MLAALIIVFREVFEAGLIVGIVLAVTSAVPHRLRWIGAGLFAGLVGACIVAAFAGTLTQLFEGMGQEVFNAAILSTAVIM LTWHNVWMARHGREMANELRTMGQAVAEGAKPLVALATVIAIAVLREGSEVALFLYGVAASDEGGGRALLGGGVLGLLLG VAVCLATYLGLMRIPPRALFRTTTVLITLLSAGMAAQAVFFLARANWLTSFDQVMWDSSSVLPEKGLAGRTLKALIGYTD QPTAMQLAVYVGVIVATIALMRLTATPPRPRAMAAE >Mature_276_residues MLAALIIVFREVFEAGLIVGIVLAVTSAVPHRLRWIGAGLFAGLVGACIVAAFAGTLTQLFEGMGQEVFNAAILSTAVIM LTWHNVWMARHGREMANELRTMGQAVAEGAKPLVALATVIAIAVLREGSEVALFLYGVAASDEGGGRALLGGGVLGLLLG VAVCLATYLGLMRIPPRALFRTTTVLITLLSAGMAAQAVFFLARANWLTSFDQVMWDSSSVLPEKGLAGRTLKALIGYTD QPTAMQLAVYVGVIVATIALMRLTATPPRPRAMAAE
Specific function: Functions only as an uptake system for Fe(2+) ion acquisition [H]
COG id: COG0672
COG function: function code P; High-affinity Fe2+/Pb2+ permease
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the oxidase-dependent Fe transporter (OFeT) (TC 9.A.10.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005217 - InterPro: IPR004923 [H]
Pfam domain/function: PF03239 FTR1 [H]
EC number: NA
Molecular weight: Translated: 28992; Mature: 28992
Theoretical pI: Translated: 9.21; Mature: 9.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAALIIVFREVFEAGLIVGIVLAVTSAVPHRLRWIGAGLFAGLVGACIVAAFAGTLTQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEGMGQEVFNAAILSTAVIMLTWHNVWMARHGREMANELRTMGQAVAEGAKPLVALATVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIAVLREGSEVALFLYGVAASDEGGGRALLGGGVLGLLLGVAVCLATYLGLMRIPPRALF HHHHHHCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RTTTVLITLLSAGMAAQAVFFLARANWLTSFDQVMWDSSSVLPEKGLAGRTLKALIGYTD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC QPTAMQLAVYVGVIVATIALMRLTATPPRPRAMAAE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MLAALIIVFREVFEAGLIVGIVLAVTSAVPHRLRWIGAGLFAGLVGACIVAAFAGTLTQL CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FEGMGQEVFNAAILSTAVIMLTWHNVWMARHGREMANELRTMGQAVAEGAKPLVALATVI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH AIAVLREGSEVALFLYGVAASDEGGGRALLGGGVLGLLLGVAVCLATYLGLMRIPPRALF HHHHHHCCCCEEEEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH RTTTVLITLLSAGMAAQAVFFLARANWLTSFDQVMWDSSSVLPEKGLAGRTLKALIGYTD HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC QPTAMQLAVYVGVIVATIALMRLTATPPRPRAMAAE CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]