| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
Click here to switch to the map view.
The map label for this gene is 146337456
Identifier: 146337456
GI number: 146337456
Start: 311774
End: 313708
Strand: Reverse
Name: 146337456
Synonym: BRADO0299
Alternate gene names: NA
Gene position: 313708-311774 (Counterclockwise)
Preceding gene: 146337457
Following gene: 146337455
Centisome position: 4.21
GC content: 73.13
Gene sequence:
>1935_bases ATGTTCCGGATCGTTGTTTTCCTCATCCTGGTCGGGCTCGCCGCAGCCGGGTCCGCCTGGGTCGCCGAGCAGACCGGCGA CGTGGTGCTGAACTGGGGTCCCTGGCGGGTCGCCATGACCCTGCCGGTGTTCGTGCTGGCGCTGGGCCTGACCATCGCGG CCTGTGTGCTGGTGTGGAATCTGCTCAGCGCGCTGCTGCGCGCGCCGAACCGCATCCGCAAGGCGCATCGCGAGCGCCGC CACCGCCGCGGCCGCCACGCCATCACCCACGGCCTGCTCGCCATCGGGCACGGCGATTCGACCGCCGCGCGCCAGCATGC CGACATGGCCAAGCGGCTCGCCGGCGACGATCCGCTGACGCTGCTCCTGCACGCCCAGGCGGCGCAGCTCGAGGGCGACC GCGACGGCGCCCGCCGCGCCTTCCGGGCCATGGCCGAGCGCCAGGATACGAGGCTGCTGGGCCTGCGCGGCCTGTTCATC GAGGCGCAGCGCGCCGACGACGCCATGGCCGCGGTGGTCATCGCCGACGAGGCGCTCAAGCTCGCACCCAACGCCAGCTG GGCCTCGCATGCGGTGCTCGGCTTCCGCTGCGCGCAAGGCGACTGGAACGGCGCGCTGTCGATCCTCGACGGCAACTACA CCGCCGGGATGATCGACAAGCCGACCTACCGCCGCCAGCGCGGCGTGCTGCTGACGGCGCGCGCGATGGCCTTGGAGACC GAGAACCGCGATCTCGCCCGCGCGAGCGCGATGGAGGCGGTGAAGCTGGCGCCGACCCTGGTGCCGGCCGCCGTGCTCGC CGCCAAGTTCGAGAGCGAGGCGCACCAGGTGCGGCGCGCGATGAAGATCATCGAGGCGGCCTGGACGTCGTGCCCGCATC CCGACCTCGCCGACGCCTATGCGCATGTCCGGCTCGGCGATTCCGCGGTCCAGCGGCTGTCGCGGATCACGAACCTCGCC GCGCGGACGCCCAACCATGTCGAGGGCGCGCTCGCGGTGGCCCGCGCCGCGATCGATGCCGCCGAGTTCGGCCGCGCCCG TGCGGCATTGGCCCCCTTCACCGAAGACCCGACCCAGCGCGTCGCGATGCTGATGGCCGAGCTGGAGCGCACCGAGCATG GCGATGCCGGCAAGGCGCGCGAATGGACCCTGCGCGCGGTGCGCGCCCGCCACGACCCGGCCTGGACCGCCGACGGCTAT GTCAGCGACCGCTGGCGGCCGATCTCGCCGGTCACCGGCCGGCTCGACGCCTTCCAATGGCAGACCCCGGTGGCGAGCCT GCCGTCGGAGCGCAACAGCGTCATCGAGAGCTCGGAATTCGCCGAGGCGATTCTGGCGCCGCCGAGCCGCCCGGCCATCC CGGAAGGCCTGGTGGAGCCGCCGCGGACCGTCCCCGCCGCGCCGGTCGTGATCACCCCGACCCTGCAGGACAACGAGCCG CCGCGTCCGGCCGAGCCGGAGCCGGCGGTGGAAACGGCGGTTGCAGACGTCGTGGACAAGCCTGTCGACAAGCCGGTGGA TATCCGTGTTGAAAAGGCTGAGGACAAGGTGGAGAAGGCCGTCGAGGGCCCTGTTGCGGAGCCGGCCGTGGTGACCTCCC GCCCGGCGTCTGCCGAACCGGCGCCACCGCTGCAGGCCGCGGCGCCTAGCGAGGCCGACGCCGAGGCTGAGACGGCCGAG GAGCCTGAGACTCCGCCCGAGCCCGCCAAGCCGGCGGAAACCGCGGCCGCCGCGCCGACGCCGCTGTTCCGCAACCGCAG CGATCTGGCCAAGCCGCCGGAGACCCCGATCCAGGCGATCGTGCCGATCATGCGCCCGCCGGACGATCCCGGCGTCGAGG ATGACGACCAGCCGCGCGACGAGTTCGCCGAGCAGATCGCGCCCAAAGCCCAGGCCGGCGGCTGGCGCGGGTTCTGGTCG CGCTTCGGCAGCTGA
Upstream 100 bases:
>100_bases CCGACGCCCGCGACGCCGCGCTGGCAGCGGCCCGCAAATTCGCCGACGACTCGATGACCGCGCTCGCCAAACCCGCGCAA TAGGACGCCCAAGGACACTC
Downstream 100 bases:
>100_bases GCCCGTCCGCCGGGCAGGCCGACCTCGCCCACTCGTAAGGCGCCGCGGGTCACACCGGCTCGATTCCGTGGTCGAGCGGC GCGCGCGGCCTTGCCAATCG
Product: putative signal peptide;putative HemY porphyrin biosynthesis protein
Products: NA
Alternate protein names: HemY Domain Protein; HemY-Like; HemY Protein; HemY N-Terminal Domain Protein; Hypthetical Protein Contains N-Terminal HemY Domain; Signal Peptide
Number of amino acids: Translated: 644; Mature: 644
Protein sequence:
>644_residues MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLALGLTIAACVLVWNLLSALLRAPNRIRKAHRERR HRRGRHAITHGLLAIGHGDSTAARQHADMAKRLAGDDPLTLLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFI EAQRADDAMAAVVIADEALKLAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMALET ENRDLARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCPHPDLADAYAHVRLGDSAVQRLSRITNLA ARTPNHVEGALAVARAAIDAAEFGRARAALAPFTEDPTQRVAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTADGY VSDRWRPISPVTGRLDAFQWQTPVASLPSERNSVIESSEFAEAILAPPSRPAIPEGLVEPPRTVPAAPVVITPTLQDNEP PRPAEPEPAVETAVADVVDKPVDKPVDIRVEKAEDKVEKAVEGPVAEPAVVTSRPASAEPAPPLQAAAPSEADAEAETAE EPETPPEPAKPAETAAAAPTPLFRNRSDLAKPPETPIQAIVPIMRPPDDPGVEDDDQPRDEFAEQIAPKAQAGGWRGFWS RFGS
Sequences:
>Translated_644_residues MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLALGLTIAACVLVWNLLSALLRAPNRIRKAHRERR HRRGRHAITHGLLAIGHGDSTAARQHADMAKRLAGDDPLTLLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFI EAQRADDAMAAVVIADEALKLAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMALET ENRDLARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCPHPDLADAYAHVRLGDSAVQRLSRITNLA ARTPNHVEGALAVARAAIDAAEFGRARAALAPFTEDPTQRVAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTADGY VSDRWRPISPVTGRLDAFQWQTPVASLPSERNSVIESSEFAEAILAPPSRPAIPEGLVEPPRTVPAAPVVITPTLQDNEP PRPAEPEPAVETAVADVVDKPVDKPVDIRVEKAEDKVEKAVEGPVAEPAVVTSRPASAEPAPPLQAAAPSEADAEAETAE EPETPPEPAKPAETAAAAPTPLFRNRSDLAKPPETPIQAIVPIMRPPDDPGVEDDDQPRDEFAEQIAPKAQAGGWRGFWS RFGS >Mature_644_residues MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLALGLTIAACVLVWNLLSALLRAPNRIRKAHRERR HRRGRHAITHGLLAIGHGDSTAARQHADMAKRLAGDDPLTLLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFI EAQRADDAMAAVVIADEALKLAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMALET ENRDLARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCPHPDLADAYAHVRLGDSAVQRLSRITNLA ARTPNHVEGALAVARAAIDAAEFGRARAALAPFTEDPTQRVAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTADGY VSDRWRPISPVTGRLDAFQWQTPVASLPSERNSVIESSEFAEAILAPPSRPAIPEGLVEPPRTVPAAPVVITPTLQDNEP PRPAEPEPAVETAVADVVDKPVDKPVDIRVEKAEDKVEKAVEGPVAEPAVVTSRPASAEPAPPLQAAAPSEADAEAETAE EPETPPEPAKPAETAAAAPTPLFRNRSDLAKPPETPIQAIVPIMRPPDDPGVEDDDQPRDEFAEQIAPKAQAGGWRGFWS RFGS
Specific function: Unknown
COG id: COG3898
COG function: function code S; Uncharacterized membrane-bound protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 69405; Mature: 69405
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: PS00639 THIOL_PROTEASE_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLALGLTIAACVLVWN CHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLSALLRAPNRIRKAHRERRHRRGRHAITHGLLAIGHGDSTAARQHADMAKRLAGDDPLT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCEE LLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFIEAQRADDAMAAVVIADEALK EEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHEEEEEECCCCCHHEEEEEEHHHHH LAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMALET CCCCCCHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHCCEEEEEHHHHHCC ENRDLARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCPHPDLADAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AHVRLGDSAVQRLSRITNLAARTPNHVEGALAVARAAIDAAEFGRARAALAPFTEDPTQR HHHEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHH VAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTADGYVSDRWRPISPVTGRLDAFQW HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTPVASLPSERNSVIESSEFAEAILAPPSRPAIPEGLVEPPRTVPAAPVVITPTLQDNEP CCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC PRPAEPEPAVETAVADVVDKPVDKPVDIRVEKAEDKVEKAVEGPVAEPAVVTSRPASAEP CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCEEECCCCCCCC APPLQAAAPSEADAEAETAEEPETPPEPAKPAETAAAAPTPLFRNRSDLAKPPETPIQAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCCCHHHH VPIMRPPDDPGVEDDDQPRDEFAEQIAPKAQAGGWRGFWSRFGS HHCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCHHHHHHCCC >Mature Secondary Structure MFRIVVFLILVGLAAAGSAWVAEQTGDVVLNWGPWRVAMTLPVFVLALGLTIAACVLVWN CHHHHHHHHHHHHHHCCCCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHH LLSALLRAPNRIRKAHRERRHRRGRHAITHGLLAIGHGDSTAARQHADMAKRLAGDDPLT HHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHHCCCCCEE LLLHAQAAQLEGDRDGARRAFRAMAERQDTRLLGLRGLFIEAQRADDAMAAVVIADEALK EEEEHHHHHCCCCCHHHHHHHHHHHHHCCCCEEEHHEEEEEECCCCCHHEEEEEEHHHHH LAPNASWASHAVLGFRCAQGDWNGALSILDGNYTAGMIDKPTYRRQRGVLLTARAMALET CCCCCCHHHHHHHEEEECCCCCCCEEEEECCCCCCCCCCCCHHHHHCCEEEEEHHHHHCC ENRDLARASAMEAVKLAPTLVPAAVLAAKFESEAHQVRRAMKIIEAAWTSCPHPDLADAY CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH AHVRLGDSAVQRLSRITNLAARTPNHVEGALAVARAAIDAAEFGRARAALAPFTEDPTQR HHHEECHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCHHHH VAMLMAELERTEHGDAGKAREWTLRAVRARHDPAWTADGYVSDRWRPISPVTGRLDAFQW HHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QTPVASLPSERNSVIESSEFAEAILAPPSRPAIPEGLVEPPRTVPAAPVVITPTLQDNEP CCCHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCC PRPAEPEPAVETAVADVVDKPVDKPVDIRVEKAEDKVEKAVEGPVAEPAVVTSRPASAEP CCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHCCCCCCCCEEECCCCCCCC APPLQAAAPSEADAEAETAEEPETPPEPAKPAETAAAAPTPLFRNRSDLAKPPETPIQAI CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCHHCCCCCCCCHHHH VPIMRPPDDPGVEDDDQPRDEFAEQIAPKAQAGGWRGFWSRFGS HHCCCCCCCCCCCCCCCHHHHHHHHHCCHHCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA