| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337451
Identifier: 146337451
GI number: 146337451
Start: 304048
End: 305457
Strand: Reverse
Name: 146337451
Synonym: BRADO0291
Alternate gene names: NA
Gene position: 305457-304048 (Counterclockwise)
Preceding gene: 146337455
Following gene: 146337449
Centisome position: 4.1
GC content: 63.19
Gene sequence:
>1410_bases ATGAGCACCACCACGGCCCTCGACAACCACACGCAGTTTCAGTCCATCGTCGGTCAGATCCGGACGCTCGCCTACAAATA TATCGAGGACAAGGATTTCGTCAGCGCGCAGCTCGCGTTCCAGAAGCTGCTCGAGCTCGACCCCAAGGACATCAACGCGC GCTTCATCTATGCGCAGCTGATCGACGACGGCTCGCACAAGAAGCGGGCCGAGGCGCGCGACATGATGCTCGCGATCCTC GACGAGAACCCTGAGATCTTCGAGCAGGCCACCGAGGGCAATCTGCACCTGATCCGCAGCGCCGCGGTGCGTTGCAGCCA TGTCGGCCCGTTCACGCGCTCGATGGAGCTGTTCCGCAAGCTCGCCAAGGCCTCCAACGAGGCGGCCGACTATTTCTCGC TAAGCGAGATCCTGACCCAGAACAACGAGTTCGAGGAGGCGGTGGCGGCGCTCGAAAAGGCCATCAAGCTCAACCCGGCC TATGACATTCCGGTCAACCGCGAGACGCTGGATCTGGCACGGTCGAACGCCAAGAAGGGCAAGGCCAGGGATGCCAAGGC GGGCCGCGCCAAGGTCGGGCGCTATCCGGAGACCAAGGACTTCCTCGGCGACCTGCAGACGCTGATCACCAGCCATATCG CGGTGAACCTCGCCAGCGCGCCCAAATTCCTCGACAAGAGCACCCGCTTCTTCACCATGGGCTCGTGCTTCGCGCGCAAC CTCTCCAAGAGCCTCAATGACAGCGGCTACAACAGCCACCACATGGAGATCTCGGAATACATCAACACGACCTTCGCCAA CCGCGTGTTCGTCGACTGGCTGCGCGGCGCCAAGATCGATCCGGAGATCCGCGAGCGCATCGTCGAGCTGCTGCCGCAGG GATCGAGCCAGGAGAATACGCTGGCCGTCATCAAGCAGGCCGACGTCTTCATCCTCACGCTCGGCGTTGCCGCGGCGTTC TTCGACCGCGAGACCGGCGCCTTCGTGCTGCCGAGGCCGACCGCGCTGAACTCGCGGGCGCTGGCCGAGAAGTACAAGTT CCGCACCGCCAGCGTGCAGGAGAATGTCGACAACGTCCGCTATCTGATCGACTTCGTCCGCAGCATCCGGCCGGGGATCA AGGTGATCGTCACGGTGTCGCCGGTGCCGTTGTTGACCTCGTTCGAATATGAATCGGTGGTGCAGGCCGACTGCCTGTCG AAGAGCACGATGCGGCTGGTGGCGCACGAAATCGTCAACAATTCCGGTCTCGAGGACATCTGGTACTGGCCGTCCTTCGA GGTGTTCCGCTGGGGCGGCTCCAACGCCTCGAGCTTCTTCGCGGCCGACGACGGTGCCGCCTGGCATGTCTCGGAGGACA AGGTGTCGGCGACCGTGCGCGCCTTCGTGCAGACGTTCTCGCCGGCCTGA
Upstream 100 bases:
>100_bases TTCCACCCGACCCGGCGATGGGCGGCTCCGATGGCCGCAGCGCGCGGGACCGACGCCGGAATGACGCGCGACGCAACGAG ACACAAAGGCGAGCCTCGAC
Downstream 100 bases:
>100_bases GCCGTGCAGGCCGAGGGCTGCCTCAGGGCAGCCGCTTGCGCCACAGGCGGACGATGAAGATGCCCGCCTGGGCGTAGCCC GGCGGCGAGCTCTCGGGCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 469; Mature: 468
Protein sequence:
>469_residues MSTTTALDNHTQFQSIVGQIRTLAYKYIEDKDFVSAQLAFQKLLELDPKDINARFIYAQLIDDGSHKKRAEARDMMLAIL DENPEIFEQATEGNLHLIRSAAVRCSHVGPFTRSMELFRKLAKASNEAADYFSLSEILTQNNEFEEAVAALEKAIKLNPA YDIPVNRETLDLARSNAKKGKARDAKAGRAKVGRYPETKDFLGDLQTLITSHIAVNLASAPKFLDKSTRFFTMGSCFARN LSKSLNDSGYNSHHMEISEYINTTFANRVFVDWLRGAKIDPEIRERIVELLPQGSSQENTLAVIKQADVFILTLGVAAAF FDRETGAFVLPRPTALNSRALAEKYKFRTASVQENVDNVRYLIDFVRSIRPGIKVIVTVSPVPLLTSFEYESVVQADCLS KSTMRLVAHEIVNNSGLEDIWYWPSFEVFRWGGSNASSFFAADDGAAWHVSEDKVSATVRAFVQTFSPA
Sequences:
>Translated_469_residues MSTTTALDNHTQFQSIVGQIRTLAYKYIEDKDFVSAQLAFQKLLELDPKDINARFIYAQLIDDGSHKKRAEARDMMLAIL DENPEIFEQATEGNLHLIRSAAVRCSHVGPFTRSMELFRKLAKASNEAADYFSLSEILTQNNEFEEAVAALEKAIKLNPA YDIPVNRETLDLARSNAKKGKARDAKAGRAKVGRYPETKDFLGDLQTLITSHIAVNLASAPKFLDKSTRFFTMGSCFARN LSKSLNDSGYNSHHMEISEYINTTFANRVFVDWLRGAKIDPEIRERIVELLPQGSSQENTLAVIKQADVFILTLGVAAAF FDRETGAFVLPRPTALNSRALAEKYKFRTASVQENVDNVRYLIDFVRSIRPGIKVIVTVSPVPLLTSFEYESVVQADCLS KSTMRLVAHEIVNNSGLEDIWYWPSFEVFRWGGSNASSFFAADDGAAWHVSEDKVSATVRAFVQTFSPA >Mature_468_residues STTTALDNHTQFQSIVGQIRTLAYKYIEDKDFVSAQLAFQKLLELDPKDINARFIYAQLIDDGSHKKRAEARDMMLAILD ENPEIFEQATEGNLHLIRSAAVRCSHVGPFTRSMELFRKLAKASNEAADYFSLSEILTQNNEFEEAVAALEKAIKLNPAY DIPVNRETLDLARSNAKKGKARDAKAGRAKVGRYPETKDFLGDLQTLITSHIAVNLASAPKFLDKSTRFFTMGSCFARNL SKSLNDSGYNSHHMEISEYINTTFANRVFVDWLRGAKIDPEIRERIVELLPQGSSQENTLAVIKQADVFILTLGVAAAFF DRETGAFVLPRPTALNSRALAEKYKFRTASVQENVDNVRYLIDFVRSIRPGIKVIVTVSPVPLLTSFEYESVVQADCLSK STMRLVAHEIVNNSGLEDIWYWPSFEVFRWGGSNASSFFAADDGAAWHVSEDKVSATVRAFVQTFSPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 52481; Mature: 52350
Theoretical pI: Translated: 6.61; Mature: 6.61
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION L=RR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTTTALDNHTQFQSIVGQIRTLAYKYIEDKDFVSAQLAFQKLLELDPKDINARFIYAQL CCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE IDDGSHKKRAEARDMMLAILDENPEIFEQATEGNLHLIRSAAVRCSHVGPFTRSMELFRK CCCCCCHHHHHHHHHEEEEECCCHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHH LAKASNEAADYFSLSEILTQNNEFEEAVAALEKAIKLNPAYDIPVNRETLDLARSNAKKG HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC KARDAKAGRAKVGRYPETKDFLGDLQTLITSHIAVNLASAPKFLDKSTRFFTMGSCFARN CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHHH LSKSLNDSGYNSHHMEISEYINTTFANRVFVDWLRGAKIDPEIRERIVELLPQGSSQENT HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC LAVIKQADVFILTLGVAAAFFDRETGAFVLPRPTALNSRALAEKYKFRTASVQENVDNVR EEEEECCCEEEEHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YLIDFVRSIRPGIKVIVTVSPVPLLTSFEYESVVQADCLSKSTMRLVAHEIVNNSGLEDI HHHHHHHHHCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE WYWPSFEVFRWGGSNASSFFAADDGAAWHVSEDKVSATVRAFVQTFSPA EECCCCEEEEECCCCCCCEEECCCCCEEEECHHHHHHHHHHHHHHHCCC >Mature Secondary Structure STTTALDNHTQFQSIVGQIRTLAYKYIEDKDFVSAQLAFQKLLELDPKDINARFIYAQL CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCEEEEEEE IDDGSHKKRAEARDMMLAILDENPEIFEQATEGNLHLIRSAAVRCSHVGPFTRSMELFRK CCCCCCHHHHHHHHHEEEEECCCHHHHHHHCCCCCEEHHHHHHHHHCCCCHHHHHHHHHH LAKASNEAADYFSLSEILTQNNEFEEAVAALEKAIKLNPAYDIPVNRETLDLARSNAKKG HHHCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCC KARDAKAGRAKVGRYPETKDFLGDLQTLITSHIAVNLASAPKFLDKSTRFFTMGSCFARN CCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCEEEHHHHHHHH LSKSLNDSGYNSHHMEISEYINTTFANRVFVDWLRGAKIDPEIRERIVELLPQGSSQENT HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCC LAVIKQADVFILTLGVAAAFFDRETGAFVLPRPTALNSRALAEKYKFRTASVQENVDNVR EEEEECCCEEEEHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YLIDFVRSIRPGIKVIVTVSPVPLLTSFEYESVVQADCLSKSTMRLVAHEIVNNSGLEDI HHHHHHHHHCCCCEEEEEECCCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE WYWPSFEVFRWGGSNASSFFAADDGAAWHVSEDKVSATVRAFVQTFSPA EECCCCEEEEECCCCCCCEEECCCCCEEEECHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA