| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337444
Identifier: 146337444
GI number: 146337444
Start: 297202
End: 298569
Strand: Reverse
Name: 146337444
Synonym: BRADO0284
Alternate gene names: NA
Gene position: 298569-297202 (Counterclockwise)
Preceding gene: 146337446
Following gene: 146337443
Centisome position: 4.0
GC content: 68.2
Gene sequence:
>1368_bases ATGAAGCTGACGCGCCGCACCATTTTGCAGAGCATGGGAACCCTGCCGCTGCTGACGAGCGGTCTGACCCTCCCGGCCCT GGCCCAGACGGCCGCAGCGCCAGCGAGCGACATGCCGCCGGTGCTGTTCGTGCACGGCAACGGCGATCATGCGGCGCTGT GGATCACATCGCTGTGGCGGATGGAGTCCAATGGCGTGCCGCGCGCGCGCCTCGCCGCGCTGAACTTCACCGATCCGCTC GCCCGCAACGACGACGCCGTGGCGCAGCCGAACCGCTCGTCGACGGACGACCAGCGCCGCGAGCTCACCGAGGCGATCAA GGCGCTGAAGGAGCGCACCGGCGCGGCGCGCGTGGCGCTGGTCGGCAGCTCGCGCGGCGGCAACGCGATCCGCAACGTGG TCAAGAACGGCGGCGGCGGCGATGTCAGCCATGCCGTGCTGTGCGGCACGCCCAATCACGGCGTGTTCGATTGGGACGAC AGCCCCGGCAGCGAGTTCAACGGCCGCGGCCCGTTCCTGCGCGGGCTGAACTCGGGCGACAGCGAGGTGACCGACGGCAC GGCGTTCCTGACCCTGCGCAGCGACGGACTCGACAAATATGCGCAGGCCGATGGCCGGCTGGTCGGCAAGCCCGGCGTGC CCACCGGGATCACAACGGAGGGACCGGCGCTGAAGGGCGCGACCAATCTGGTGATCGGCGCGCTCGATCATCGCGAGGTC GCGTTCCATCCGCGGGCGTTCCGCGAGATCTACAAATTCATCGCAGGCCGCGAGCCGTCGTTCATTGCGATCCAGCCGGA ACGCGAGGTGCGCATCAGCGGTCTGGTGACGGGAACGCCGGGTGGCGCGCCCACCAATCGCCCGGTCGCCGGGGCTACGG TGGAAGTCTATAGGGTCTCCGGCGAGACCGGCGCCCGCAACGGCGAGCCGGTCTATCGCGGCCAGACCGGCTCCGATGGA CGCTGGGGCCCTGCGGAGATCGATCCGGCTTCCTATATCGAGATCGTGCTGACGTCGCCGGGTGCACCGATCACTCATTT CTACCGCTCGCCGTTCCCGCGCTCGTCCGATGTCGTGCATCTGCGCGCAGCGCGGCCGCTGGGCCAGGCCGATGCCGGCG CGGGCGCGATCGTCATCATGGCAAGGCCCCGCGGCTATTTCGGGCTGCCCCGCGACATCGTGTTGCTCGACGGCAGAGAA CCGGCGGACGTACAGAAGGGAGTACCGACGGATGCAGCAACGACATTGCGGCTGCCGGCGGGCGAAGTCGGACGCAGCGT CACCGGACTGTTCAATGAGGAACGCATCACTGCCCGTCTTTGGCCTGCATCGGAAAGTAGAATCACGATGATCGAACTGA CTAATTAG
Upstream 100 bases:
>100_bases ACGTATGTGATGCCTGCGAATGTCTGCCGCTGTCCAGTGCTCGATCCCGATCTTGGACGACGGTCAACGAACACAAAATG AACGAGACGGAGGACCGCCG
Downstream 100 bases:
>100_bases TTGTGGAGTATGATGGTACGTAACGATCCCGGAGAGCGCGCAACTGCGCTCTCTCCTGTCAGCGAGACGGAAGATCCTTC CGCGAGCTACGAGATCAGGC
Product: putative hydrolase
Products: NA
Alternate protein names: Lactonizing Lipase; Lipase; Hydrolase
Number of amino acids: Translated: 455; Mature: 455
Protein sequence:
>455_residues MKLTRRTILQSMGTLPLLTSGLTLPALAQTAAAPASDMPPVLFVHGNGDHAALWITSLWRMESNGVPRARLAALNFTDPL ARNDDAVAQPNRSSTDDQRRELTEAIKALKERTGAARVALVGSSRGGNAIRNVVKNGGGGDVSHAVLCGTPNHGVFDWDD SPGSEFNGRGPFLRGLNSGDSEVTDGTAFLTLRSDGLDKYAQADGRLVGKPGVPTGITTEGPALKGATNLVIGALDHREV AFHPRAFREIYKFIAGREPSFIAIQPEREVRISGLVTGTPGGAPTNRPVAGATVEVYRVSGETGARNGEPVYRGQTGSDG RWGPAEIDPASYIEIVLTSPGAPITHFYRSPFPRSSDVVHLRAARPLGQADAGAGAIVIMARPRGYFGLPRDIVLLDGRE PADVQKGVPTDAATTLRLPAGEVGRSVTGLFNEERITARLWPASESRITMIELTN
Sequences:
>Translated_455_residues MKLTRRTILQSMGTLPLLTSGLTLPALAQTAAAPASDMPPVLFVHGNGDHAALWITSLWRMESNGVPRARLAALNFTDPL ARNDDAVAQPNRSSTDDQRRELTEAIKALKERTGAARVALVGSSRGGNAIRNVVKNGGGGDVSHAVLCGTPNHGVFDWDD SPGSEFNGRGPFLRGLNSGDSEVTDGTAFLTLRSDGLDKYAQADGRLVGKPGVPTGITTEGPALKGATNLVIGALDHREV AFHPRAFREIYKFIAGREPSFIAIQPEREVRISGLVTGTPGGAPTNRPVAGATVEVYRVSGETGARNGEPVYRGQTGSDG RWGPAEIDPASYIEIVLTSPGAPITHFYRSPFPRSSDVVHLRAARPLGQADAGAGAIVIMARPRGYFGLPRDIVLLDGRE PADVQKGVPTDAATTLRLPAGEVGRSVTGLFNEERITARLWPASESRITMIELTN >Mature_455_residues MKLTRRTILQSMGTLPLLTSGLTLPALAQTAAAPASDMPPVLFVHGNGDHAALWITSLWRMESNGVPRARLAALNFTDPL ARNDDAVAQPNRSSTDDQRRELTEAIKALKERTGAARVALVGSSRGGNAIRNVVKNGGGGDVSHAVLCGTPNHGVFDWDD SPGSEFNGRGPFLRGLNSGDSEVTDGTAFLTLRSDGLDKYAQADGRLVGKPGVPTGITTEGPALKGATNLVIGALDHREV AFHPRAFREIYKFIAGREPSFIAIQPEREVRISGLVTGTPGGAPTNRPVAGATVEVYRVSGETGARNGEPVYRGQTGSDG RWGPAEIDPASYIEIVLTSPGAPITHFYRSPFPRSSDVVHLRAARPLGQADAGAGAIVIMARPRGYFGLPRDIVLLDGRE PADVQKGVPTDAATTLRLPAGEVGRSVTGLFNEERITARLWPASESRITMIELTN
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48224; Mature: 48224
Theoretical pI: Translated: 8.95; Mature: 8.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLTRRTILQSMGTLPLLTSGLTLPALAQTAAAPASDMPPVLFVHGNGDHAALWITSLWR CCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEHHHH MESNGVPRARLAALNFTDPLARNDDAVAQPNRSSTDDQRRELTEAIKALKERTGAARVAL HCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE VGSSRGGNAIRNVVKNGGGGDVSHAVLCGTPNHGVFDWDDSPGSEFNGRGPFLRGLNSGD EECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCEEECCCCCC SEVTDGTAFLTLRSDGLDKYAQADGRLVGKPGVPTGITTEGPALKGATNLVIGALDHREV CCCCCCEEEEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEE AFHPRAFREIYKFIAGREPSFIAIQPEREVRISGLVTGTPGGAPTNRPVAGATVEVYRVS EECCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEC GETGARNGEPVYRGQTGSDGRWGPAEIDPASYIEIVLTSPGAPITHFYRSPFPRSSDVVH CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCEEE LRAARPLGQADAGAGAIVIMARPRGYFGLPRDIVLLDGREPADVQKGVPTDAATTLRLPA EEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEEECCC GEVGRSVTGLFNEERITARLWPASESRITMIELTN HHHCCHHHCCCCCCEEEEEECCCCCCEEEEEEECC >Mature Secondary Structure MKLTRRTILQSMGTLPLLTSGLTLPALAQTAAAPASDMPPVLFVHGNGDHAALWITSLWR CCCHHHHHHHHHCCCHHHHCCCCHHHHHHHHCCCCCCCCCEEEEECCCCEEEEEEEHHHH MESNGVPRARLAALNFTDPLARNDDAVAQPNRSSTDDQRRELTEAIKALKERTGAARVAL HCCCCCCHHEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEE VGSSRGGNAIRNVVKNGGGGDVSHAVLCGTPNHGVFDWDDSPGSEFNGRGPFLRGLNSGD EECCCCCHHHHHHHHCCCCCCCCCEEEEECCCCCEEECCCCCCCCCCCCCCEEECCCCCC SEVTDGTAFLTLRSDGLDKYAQADGRLVGKPGVPTGITTEGPALKGATNLVIGALDHREV CCCCCCEEEEEEECCCCHHHHHCCCEEEECCCCCCCCCCCCCCCCCCCEEEEEECCCCEE AFHPRAFREIYKFIAGREPSFIAIQPEREVRISGLVTGTPGGAPTNRPVAGATVEVYRVS EECCHHHHHHHHHHCCCCCCEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCEEEEEEEC GETGARNGEPVYRGQTGSDGRWGPAEIDPASYIEIVLTSPGAPITHFYRSPFPRSSDVVH CCCCCCCCCCEECCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHHCCCCCCCCCEEE LRAARPLGQADAGAGAIVIMARPRGYFGLPRDIVLLDGREPADVQKGVPTDAATTLRLPA EEECCCCCCCCCCCCEEEEEECCCCCCCCCCEEEEECCCCCCHHHCCCCCCCCEEEECCC GEVGRSVTGLFNEERITARLWPASESRITMIELTN HHHCCHHHCCCCCCEEEEEECCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA