Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
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Accession | NC_009445 |
Length | 7,456,587 |
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The map label for this gene is 146337432
Identifier: 146337432
GI number: 146337432
Start: 285610
End: 286938
Strand: Reverse
Name: 146337432
Synonym: BRADO0270
Alternate gene names: NA
Gene position: 286938-285610 (Counterclockwise)
Preceding gene: 146337433
Following gene: 146337431
Centisome position: 3.85
GC content: 69.38
Gene sequence:
>1329_bases ATGATCGCGTCTGCCACCTCGCGCATCCTCGTGCTCGGCGCCTCGGGGCTGATCGGCCGCTTCGTCACCGACGACCTGCG CCGGCGCGGATTTGCGACGATCGGCGTGGCGCGCGCGTTCTCTGCGTCACAGCGCGTGTCATCGCTCGATGTCGAGCTGC CGATCATGACGTTCGATGCCGCCGCATTGGCCGGACTGATCCGCGCGCGTGAGATCGATGTCATCGTCAACTGCCTCGGC GTGCTGCAGGATGGTCCGGGCAGCGACACGGATGCCGTGCATCATCAGTTCGTGGCGCGGCTGCTCGCCGCGATCCCGTC GAGCGGACGCGGCGTGCGCCTCCTTCACATCTCCATTCCAGGCACGGCGGAGGAGGACCGCACCGCCTTCGCCACCACCA AACGCGAGGCGGAGCGGCTGATCGCGGCTTCAGGCCTTCCGCATGCGATCCTGCGTCCGGGCTTCGTGATCGCACCATCG GCCTATGGCGGCAGCGCGATGCTGCGCGCGCTGGCGGCGCTTCCGATCGACCTGCCGGGCAAGGACGCGGCGACACCGTT CCAGCCCGTGGCAGTGGCGGACATCGCCGCGACCGTCGCCTGGCTCGCCGCGAGGCCGCTCGATGAGGACGCCACGCGCG CGGTGAACTGGGATCTGATGCAGCCGGAGCCCGTCACGCTGGGCGGCGTCATCGCCGCGTTCCGACGCAGCTTCGGAACA ACAGATGGGCCGCGCCTCCCCGTGCCGGCGCCGCTGGTCGATTTCGGCGCTGTCGCCGGGGACCTCGCCAGCCGGCTCGG CTGGATGCCGCCGATGCGGACCACGGCGATCGCCGAGCTGCGCCGCGGCGTGCGCGGCGATCCGGCGCCGTGGATGGCCG CGACCGGCATCGCGCCAACCACGCTGAGCGAAGCGGTCGGCGCGCACGGCGCGACCATTCAGGACAAATGGTTCGCGCGG CTGTTCCTGGTCAAGGCGCTGATGATCGCGAGCCTGGTGCTGTTCTGGATCGCCTCCGGCGGCATCGCGCTGTTCATCTC ATTCCCGGCGACGACCGCGATCCTGACCACGCGCGGCTGGCCGGAGGGATTTGCGGTCCCGTTCGCAGCGGTCACCAGCA TGATGGACATCTCGGTCGGCGTGTTGATCGCGTTCCGCAAAACGGCGGCTTTCGGCCTCGCTGCGGGCATCTTCGTCTCG CTCGGCTACATGCTGGGATGCGCGGTGCTGACGCCCGACCTCTGGCTCGAGCCGCTCGGCGCCCTGGTGAAGACGGGACC TGCGATCGTGCTGATGCTGGTCGCGCTCTTGATGATGGACAATCGCTGA
Upstream 100 bases:
>100_bases ACCGTTTTCCGCCGCTGGTTCCTGTGCGGCATCCCCGGCTTCGGCTCGGTCATGGCCATTCTCTGGCTGATGATCGCGAA GCCGTTCTAAAGGAATTTGC
Downstream 100 bases:
>100_bases TGACGACGCACATGACGAGCTGGCCCGACGACGATGTGATTCTCTATGACGGCGTCTGCGTGTTCTGCTCGCGCTGGGTG CAGTTCGTGATCGCGCGCGA
Product: hypothetical protein
Products: NA
Alternate protein names: Oxidoreductase Protein; DTDP-4-Dehydrorhamnose Reductase; Nucleoside-Diphosphate-Sugar Epimerase; Oxidoreductase; NADH-Ubiquinone Oxidoreductase; NADH Dehydrogenase; Transmembrane Protein; NAD Dependent Epimerase/Dehydratase Family; Nucleoside-Diphosphate-Sugar Epimerase Protein
Number of amino acids: Translated: 442; Mature: 442
Protein sequence:
>442_residues MIASATSRILVLGASGLIGRFVTDDLRRRGFATIGVARAFSASQRVSSLDVELPIMTFDAAALAGLIRAREIDVIVNCLG VLQDGPGSDTDAVHHQFVARLLAAIPSSGRGVRLLHISIPGTAEEDRTAFATTKREAERLIAASGLPHAILRPGFVIAPS AYGGSAMLRALAALPIDLPGKDAATPFQPVAVADIAATVAWLAARPLDEDATRAVNWDLMQPEPVTLGGVIAAFRRSFGT TDGPRLPVPAPLVDFGAVAGDLASRLGWMPPMRTTAIAELRRGVRGDPAPWMAATGIAPTTLSEAVGAHGATIQDKWFAR LFLVKALMIASLVLFWIASGGIALFISFPATTAILTTRGWPEGFAVPFAAVTSMMDISVGVLIAFRKTAAFGLAAGIFVS LGYMLGCAVLTPDLWLEPLGALVKTGPAIVLMLVALLMMDNR
Sequences:
>Translated_442_residues MIASATSRILVLGASGLIGRFVTDDLRRRGFATIGVARAFSASQRVSSLDVELPIMTFDAAALAGLIRAREIDVIVNCLG VLQDGPGSDTDAVHHQFVARLLAAIPSSGRGVRLLHISIPGTAEEDRTAFATTKREAERLIAASGLPHAILRPGFVIAPS AYGGSAMLRALAALPIDLPGKDAATPFQPVAVADIAATVAWLAARPLDEDATRAVNWDLMQPEPVTLGGVIAAFRRSFGT TDGPRLPVPAPLVDFGAVAGDLASRLGWMPPMRTTAIAELRRGVRGDPAPWMAATGIAPTTLSEAVGAHGATIQDKWFAR LFLVKALMIASLVLFWIASGGIALFISFPATTAILTTRGWPEGFAVPFAAVTSMMDISVGVLIAFRKTAAFGLAAGIFVS LGYMLGCAVLTPDLWLEPLGALVKTGPAIVLMLVALLMMDNR >Mature_442_residues MIASATSRILVLGASGLIGRFVTDDLRRRGFATIGVARAFSASQRVSSLDVELPIMTFDAAALAGLIRAREIDVIVNCLG VLQDGPGSDTDAVHHQFVARLLAAIPSSGRGVRLLHISIPGTAEEDRTAFATTKREAERLIAASGLPHAILRPGFVIAPS AYGGSAMLRALAALPIDLPGKDAATPFQPVAVADIAATVAWLAARPLDEDATRAVNWDLMQPEPVTLGGVIAAFRRSFGT TDGPRLPVPAPLVDFGAVAGDLASRLGWMPPMRTTAIAELRRGVRGDPAPWMAATGIAPTTLSEAVGAHGATIQDKWFAR LFLVKALMIASLVLFWIASGGIALFISFPATTAILTTRGWPEGFAVPFAAVTSMMDISVGVLIAFRKTAAFGLAAGIFVS LGYMLGCAVLTPDLWLEPLGALVKTGPAIVLMLVALLMMDNR
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46289; Mature: 46289
Theoretical pI: Translated: 8.76; Mature: 8.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIASATSRILVLGASGLIGRFVTDDLRRRGFATIGVARAFSASQRVSSLDVELPIMTFDA CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECH AALAGLIRAREIDVIVNCLGVLQDGPGSDTDAVHHQFVARLLAAIPSSGRGVRLLHISIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC GTAEEDRTAFATTKREAERLIAASGLPHAILRPGFVIAPSAYGGSAMLRALAALPIDLPG CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCC KDAATPFQPVAVADIAATVAWLAARPLDEDATRAVNWDLMQPEPVTLGGVIAAFRRSFGT CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC TDGPRLPVPAPLVDFGAVAGDLASRLGWMPPMRTTAIAELRRGVRGDPAPWMAATGIAPT CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCHH TLSEAVGAHGATIQDKWFARLFLVKALMIASLVLFWIASGGIALFISFPATTAILTTRGW HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCC PEGFAVPFAAVTSMMDISVGVLIAFRKTAAFGLAAGIFVSLGYMLGCAVLTPDLWLEPLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALVKTGPAIVLMLVALLMMDNR HHHHCCHHHHHHHHHHHHHCCC >Mature Secondary Structure MIASATSRILVLGASGLIGRFVTDDLRRRGFATIGVARAFSASQRVSSLDVELPIMTFDA CCCCCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCEEEEEEEECH AALAGLIRAREIDVIVNCLGVLQDGPGSDTDAVHHQFVARLLAAIPSSGRGVRLLHISIP HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEECC GTAEEDRTAFATTKREAERLIAASGLPHAILRPGFVIAPSAYGGSAMLRALAALPIDLPG CCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHCCCEEEECCCCCHHHHHHHHHHCCCCCCC KDAATPFQPVAVADIAATVAWLAARPLDEDATRAVNWDLMQPEPVTLGGVIAAFRRSFGT CCCCCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC TDGPRLPVPAPLVDFGAVAGDLASRLGWMPPMRTTAIAELRRGVRGDPAPWMAATGIAPT CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCEECCCCHH TLSEAVGAHGATIQDKWFARLFLVKALMIASLVLFWIASGGIALFISFPATTAILTTRGW HHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCEEEEEECCC PEGFAVPFAAVTSMMDISVGVLIAFRKTAAFGLAAGIFVSLGYMLGCAVLTPDLWLEPLG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHH ALVKTGPAIVLMLVALLMMDNR HHHHCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA