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The map label for this gene is yeiE [H]

Identifier: 146337429

GI number: 146337429

Start: 283115

End: 284002

Strand: Reverse

Name: yeiE [H]

Synonym: BRADO0267

Alternate gene names: 146337429

Gene position: 284002-283115 (Counterclockwise)

Preceding gene: 146337430

Following gene: 146337419

Centisome position: 3.81

GC content: 68.81

Gene sequence:

>888_bases
GTGACGCTCGAGCAGTTGCGGATCTTCGTTGCGGTCGCCACGCGCGAGCACGTCACCCAGGCGGCGCGCGAGCTCAACCT
GACGCAGTCGGCGACATCGGCAGCTGTCGCGGCGCTCGAAGCGCGCTACCAGACCAGACTGTTCGATCGCGTCGGCCGCC
GCATCGTGCTCACGGCGGCCGGCAAAGCGTTTCTGGTCGAAGCCAAGGCGGTGCTCGCGCGTACCGCCGCGGCCGAGACC
GTGCTCGACGATCTCGCCGGACTGAAGCGCGGGCAGCTCGCGCTGGCGGCGAGCCAGACCATCGCCGGCTACTGGCTGCC
GGCGTTCATTCACCGCTTCAACGCCGCGCATCCCGCGATCAGGCTGCAGCTGTCGATCGGTAATACCGAGCAGGTCGCGG
ACCGGGTCCGCGAGGGCGCAGCCGATCTCGGCTTCGTCGAGGGCGATATCGATGATCCCCTGCTCGCGGCGCAGCCGGTC
GCGGAAGACGAGATGGTGCTGGTGGGCCCGGCCGATCATCCGTTGTGCCGGGGAGCTTCGGTGTCGGCCGCCAATCTGAA
AGCCGCGCGCTGGGTGCTGCGCGAGCAGGGCTCCGGCACGCGCGCCGTCCTCGAAGCGGCGCTCGGCCGGTTCGGCCTCC
GTACCGGTGAGCTCGATGTGGCGTTCGAGCTGCCGTCCAACGAGGCCGTCCGCAGCGCTGTCGAGGCGGGCGCGGGCATA
ACGGTGCTGTCAAGGCTGGTTGTGATGCGGGGGGTCAAAGCGGGGCTGCTGGCGGTCGCCAATCTCGAGCTGGCGAAGCG
GCCTTTCTACAGCCTCCGACACAAGGAGCATCATCAGACCCAGGCCGTGCGGGAGTTTCTACGGATGGTGGGGGAGACGT
TTGCTTGA

Upstream 100 bases:

>100_bases
AGGCCAAGGGGCTGCGGCCGGCGGCGCTGGGTTTCGCGGCCTTCCTGTTCATCGCGAGCTTCAGCCTCGCTTTGGTGAAG
CTGACGACCTAGGAGACGAT

Downstream 100 bases:

>100_bases
GGCCCTTGGCGGCGACGGCGCGGAGAGTGATCCGCGTGCATCAACGCACTCCGTCATCGCGAGCGCAGCGAAGCGATCCA
GGACTCTGACCGCTTGCGTG

Product: LysR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTLEQLRIFVAVATREHVTQAARELNLTQSATSAAVAALEARYQTRLFDRVGRRIVLTAAGKAFLVEAKAVLARTAAAET
VLDDLAGLKRGQLALAASQTIAGYWLPAFIHRFNAAHPAIRLQLSIGNTEQVADRVREGAADLGFVEGDIDDPLLAAQPV
AEDEMVLVGPADHPLCRGASVSAANLKAARWVLREQGSGTRAVLEAALGRFGLRTGELDVAFELPSNEAVRSAVEAGAGI
TVLSRLVVMRGVKAGLLAVANLELAKRPFYSLRHKEHHQTQAVREFLRMVGETFA

Sequences:

>Translated_295_residues
MTLEQLRIFVAVATREHVTQAARELNLTQSATSAAVAALEARYQTRLFDRVGRRIVLTAAGKAFLVEAKAVLARTAAAET
VLDDLAGLKRGQLALAASQTIAGYWLPAFIHRFNAAHPAIRLQLSIGNTEQVADRVREGAADLGFVEGDIDDPLLAAQPV
AEDEMVLVGPADHPLCRGASVSAANLKAARWVLREQGSGTRAVLEAALGRFGLRTGELDVAFELPSNEAVRSAVEAGAGI
TVLSRLVVMRGVKAGLLAVANLELAKRPFYSLRHKEHHQTQAVREFLRMVGETFA
>Mature_294_residues
TLEQLRIFVAVATREHVTQAARELNLTQSATSAAVAALEARYQTRLFDRVGRRIVLTAAGKAFLVEAKAVLARTAAAETV
LDDLAGLKRGQLALAASQTIAGYWLPAFIHRFNAAHPAIRLQLSIGNTEQVADRVREGAADLGFVEGDIDDPLLAAQPVA
EDEMVLVGPADHPLCRGASVSAANLKAARWVLREQGSGTRAVLEAALGRFGLRTGELDVAFELPSNEAVRSAVEAGAGIT
VLSRLVVMRGVKAGLLAVANLELAKRPFYSLRHKEHHQTQAVREFLRMVGETFA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lysR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1788481, Length=289, Percent_Identity=35.6401384083045, Blast_Score=170, Evalue=1e-43,
Organism=Escherichia coli, GI145693105, Length=286, Percent_Identity=25.5244755244755, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI157672245, Length=291, Percent_Identity=30.5841924398625, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1788748, Length=250, Percent_Identity=29.6, Blast_Score=97, Evalue=2e-21,
Organism=Escherichia coli, GI1788296, Length=245, Percent_Identity=29.3877551020408, Blast_Score=94, Evalue=1e-20,
Organism=Escherichia coli, GI1787806, Length=248, Percent_Identity=29.4354838709677, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1790399, Length=249, Percent_Identity=25.7028112449799, Blast_Score=83, Evalue=2e-17,
Organism=Escherichia coli, GI1787530, Length=253, Percent_Identity=27.2727272727273, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI87082132, Length=289, Percent_Identity=25.9515570934256, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI1788887, Length=192, Percent_Identity=29.6875, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787879, Length=306, Percent_Identity=29.7385620915033, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787601, Length=175, Percent_Identity=26.8571428571429, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1790208, Length=250, Percent_Identity=26.4, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786401, Length=299, Percent_Identity=24.7491638795987, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787589, Length=216, Percent_Identity=29.6296296296296, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1789173, Length=140, Percent_Identity=30.7142857142857, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000847
- InterPro:   IPR005119
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00126 HTH_1; PF03466 LysR_substrate [H]

EC number: NA

Molecular weight: Translated: 31658; Mature: 31527

Theoretical pI: Translated: 9.12; Mature: 9.12

Prosite motif: PS50931 HTH_LYSR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLEQLRIFVAVATREHVTQAARELNLTQSATSAAVAALEARYQTRLFDRVGRRIVLTAA
CCHHHHEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
GKAFLVEAKAVLARTAAAETVLDDLAGLKRGQLALAASQTIAGYWLPAFIHRFNAAHPAI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE
RLQLSIGNTEQVADRVREGAADLGFVEGDIDDPLLAAQPVAEDEMVLVGPADHPLCRGAS
EEEEECCCHHHHHHHHHHCCHHCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
VSAANLKAARWVLREQGSGTRAVLEAALGRFGLRTGELDVAFELPSNEAVRSAVEAGAGI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCH
TVLSRLVVMRGVKAGLLAVANLELAKRPFYSLRHKEHHQTQAVREFLRMVGETFA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TLEQLRIFVAVATREHVTQAARELNLTQSATSAAVAALEARYQTRLFDRVGRRIVLTAA
CHHHHEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEC
GKAFLVEAKAVLARTAAAETVLDDLAGLKRGQLALAASQTIAGYWLPAFIHRFNAAHPAI
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCEE
RLQLSIGNTEQVADRVREGAADLGFVEGDIDDPLLAAQPVAEDEMVLVGPADHPLCRGAS
EEEEECCCHHHHHHHHHHCCHHCCEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCC
VSAANLKAARWVLREQGSGTRAVLEAALGRFGLRTGELDVAFELPSNEAVRSAVEAGAGI
CCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCH
TVLSRLVVMRGVKAGLLAVANLELAKRPFYSLRHKEHHQTQAVREFLRMVGETFA
HHHHHHHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]