| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337428
Identifier: 146337428
GI number: 146337428
Start: 281718
End: 282965
Strand: Direct
Name: 146337428
Synonym: BRADO0266
Alternate gene names: NA
Gene position: 281718-282965 (Clockwise)
Preceding gene: 146337427
Following gene: 146337434
Centisome position: 3.78
GC content: 69.31
Gene sequence:
>1248_bases ATGAGCAGCCTCCCATCCTCCGTAGACATCGCCATCATCGGCGCCGGTGCCGCCGGCCTCGGCGCCGCGCATGCGCTGAA GAATGCGGGCGTCTCGTTCGTTGTGCTCGAGGGCCGCGACCGCATCGGCGGCCGTGCCCACACCATCATGGCCTCGCCAG AGGTCACCTTCGACCTCGGCTGCGGCTGGCTGCATTCCGCGGACCGCAACTCCTTCGTCGGCATCGCCGAGCAGCTCGCC TTCACCATCGAAAAATCCCGCCCGCCGTGGCGCGACCGCGCCTATGAAGCCGCTTTTTCCCGCGCCGAGCGCGACGATTT CCTCCGCGCGCTGGAGGCCTTCTTCACCCGCACCGCCGCGACCGCGGCGAGCGGCCACGATGCGCCGGCGAGCGTCTGTC TGGAGCCCGGCAATCGCTGGAACGGCATGATCGATGCGATCTGCACCTATCTCAATGGCTGCGAGCTCGACCAGATGTCG CTGCTCGATTTCGAGGCCTATGAGGACACCGAATTGAACTGGCGCATCCGCCGCGGCTATGGCGCGCTGGTGTCGGCTTA TGGCGCCGGCCTGCCGATCGCGCTGAACTGCAACGTCACGCTGATCGATCACAGCGACAAGCGCATCCGGCTCACGACGT CACAGGGCACGCTGACCGCCGACAAGGTCATCGTCACCGTCCCGACCAACCTGATCGCCGACGAAGCGCTCCGCTTCACG CCGGCCTTGCCCGACAAGCTCGCCGCCGCTGCCGGCCTGCCGCTCGGCCTCGACAACAAGGTGACGCTGGCGCTCGATGG CTGGGACCACCTGCCGAAGGATTCCGGCCTGCGCGGCCGCAGCAGTACCGCGCGGGTCGGCAGCCTCCAGCTGCGCCCGT TCGGCCAGCCCTGCATCGAAGGATTCTACGGCGGCAGCTTCGCCCGCGAGATCGAGGCGGCCGGCGAGGGCGCCCTCGCG GCGCAGGCGATCGACGACGTCGCGGCGCTGCTCGGCAACGACATCCGCAGGAGCCTCAAGCCGCTCGCCGAGTCCCGCTG GGGCGCCGACCCGTTCGCCCGCGGCGCCTATTCGCACGCGCTTCCCGGCCATGCCGACAAGCGCGCGTTGCTCGCCGCGC CGGTCGATGATCGGCTCTCCTTCGCCGGCGAGGCGACGCCCCCGGATTTCTTCTCGACCGCCCATGGTGCGCGCGACAGC GGAGAGCGCGCGGCAAGAGAAGCACTCGCTTGGCTAGGCAAGCGATAG
Upstream 100 bases:
>100_bases ACACGCCCGTCTCGGCGTACTGGATCACCCGCCTTCGCGGGTGATGACGGCAGTGGTGAGGTGACAGCCGGGCCTCCATT GTAGGAGCCGCAGCCGCCTC
Downstream 100 bases:
>100_bases TCTATCTATCGTCATTGCAAGCGCCGAGCGCCGCGAAGCAATCCAGAGTCACGCAAGCGGTCAGAGTCCTGGATCGCTTC GCTGCGCTCGCGATGACGGA
Product: putative amine oxidase
Products: NA
Alternate protein names: Twin-Arginine Translocation Pathway Signal; Amine Oxidase Protein; FAD Dependent Oxidoreductase; Amine Oxidase Family Protein; Flavin Containing Amine Oxidoreductase; Amine Oxidoreductase Domain-Containing Protein
Number of amino acids: Translated: 415; Mature: 414
Protein sequence:
>415_residues MSSLPSSVDIAIIGAGAAGLGAAHALKNAGVSFVVLEGRDRIGGRAHTIMASPEVTFDLGCGWLHSADRNSFVGIAEQLA FTIEKSRPPWRDRAYEAAFSRAERDDFLRALEAFFTRTAATAASGHDAPASVCLEPGNRWNGMIDAICTYLNGCELDQMS LLDFEAYEDTELNWRIRRGYGALVSAYGAGLPIALNCNVTLIDHSDKRIRLTTSQGTLTADKVIVTVPTNLIADEALRFT PALPDKLAAAAGLPLGLDNKVTLALDGWDHLPKDSGLRGRSSTARVGSLQLRPFGQPCIEGFYGGSFAREIEAAGEGALA AQAIDDVAALLGNDIRRSLKPLAESRWGADPFARGAYSHALPGHADKRALLAAPVDDRLSFAGEATPPDFFSTAHGARDS GERAAREALAWLGKR
Sequences:
>Translated_415_residues MSSLPSSVDIAIIGAGAAGLGAAHALKNAGVSFVVLEGRDRIGGRAHTIMASPEVTFDLGCGWLHSADRNSFVGIAEQLA FTIEKSRPPWRDRAYEAAFSRAERDDFLRALEAFFTRTAATAASGHDAPASVCLEPGNRWNGMIDAICTYLNGCELDQMS LLDFEAYEDTELNWRIRRGYGALVSAYGAGLPIALNCNVTLIDHSDKRIRLTTSQGTLTADKVIVTVPTNLIADEALRFT PALPDKLAAAAGLPLGLDNKVTLALDGWDHLPKDSGLRGRSSTARVGSLQLRPFGQPCIEGFYGGSFAREIEAAGEGALA AQAIDDVAALLGNDIRRSLKPLAESRWGADPFARGAYSHALPGHADKRALLAAPVDDRLSFAGEATPPDFFSTAHGARDS GERAAREALAWLGKR >Mature_414_residues SSLPSSVDIAIIGAGAAGLGAAHALKNAGVSFVVLEGRDRIGGRAHTIMASPEVTFDLGCGWLHSADRNSFVGIAEQLAF TIEKSRPPWRDRAYEAAFSRAERDDFLRALEAFFTRTAATAASGHDAPASVCLEPGNRWNGMIDAICTYLNGCELDQMSL LDFEAYEDTELNWRIRRGYGALVSAYGAGLPIALNCNVTLIDHSDKRIRLTTSQGTLTADKVIVTVPTNLIADEALRFTP ALPDKLAAAAGLPLGLDNKVTLALDGWDHLPKDSGLRGRSSTARVGSLQLRPFGQPCIEGFYGGSFAREIEAAGEGALAA QAIDDVAALLGNDIRRSLKPLAESRWGADPFARGAYSHALPGHADKRALLAAPVDDRLSFAGEATPPDFFSTAHGARDSG ERAAREALAWLGKR
Specific function: Unknown
COG id: COG1231
COG function: function code E; Monoamine oxidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI58761546, Length=295, Percent_Identity=28.8135593220339, Blast_Score=82, Evalue=1e-15, Organism=Homo sapiens, GI58761544, Length=295, Percent_Identity=28.8135593220339, Blast_Score=81, Evalue=1e-15, Organism=Drosophila melanogaster, GI24667273, Length=303, Percent_Identity=29.042904290429, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI21356479, Length=303, Percent_Identity=29.042904290429, Blast_Score=69, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44156; Mature: 44025
Theoretical pI: Translated: 5.86; Mature: 5.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSLPSSVDIAIIGAGAAGLGAAHALKNAGVSFVVLEGRDRIGGRAHTIMASPEVTFDLG CCCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEECC CGWLHSADRNSFVGIAEQLAFTIEKSRPPWRDRAYEAAFSRAERDDFLRALEAFFTRTAA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAASGHDAPASVCLEPGNRWNGMIDAICTYLNGCELDQMSLLDFEAYEDTELNWRIRRGY HHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCEEEECCC GALVSAYGAGLPIALNCNVTLIDHSDKRIRLTTSQGTLTADKVIVTVPTNLIADEALRFT HHHHHHHCCCCCEEEECCEEEEECCCCEEEEEECCCCEEECEEEEEECCHHHHHHHHHCC PALPDKLAAAAGLPLGLDNKVTLALDGWDHLPKDSGLRGRSSTARVGSLQLRPFGQPCIE CCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECEEEECCCCCHHHH GFYGGSFAREIEAAGEGALAAQAIDDVAALLGNDIRRSLKPLAESRWGADPFARGAYSHA HHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC LPGHADKRALLAAPVDDRLSFAGEATPPDFFSTAHGARDSGERAAREALAWLGKR CCCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure SSLPSSVDIAIIGAGAAGLGAAHALKNAGVSFVVLEGRDRIGGRAHTIMASPEVTFDLG CCCCCCCEEEEEECCCCCHHHHHHHHHCCCEEEEEECCCCCCCCEEEEEECCCEEEECC CGWLHSADRNSFVGIAEQLAFTIEKSRPPWRDRAYEAAFSRAERDDFLRALEAFFTRTAA CCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TAASGHDAPASVCLEPGNRWNGMIDAICTYLNGCELDQMSLLDFEAYEDTELNWRIRRGY HHCCCCCCCCEEEECCCCCCCHHHHHHHHHHCCCCCCCHHEEEECCCCCCCCCEEEECCC GALVSAYGAGLPIALNCNVTLIDHSDKRIRLTTSQGTLTADKVIVTVPTNLIADEALRFT HHHHHHHCCCCCEEEECCEEEEECCCCEEEEEECCCCEEECEEEEEECCHHHHHHHHHCC PALPDKLAAAAGLPLGLDNKVTLALDGWDHLPKDSGLRGRSSTARVGSLQLRPFGQPCIE CCCCHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEECEEEECCCCCHHHH GFYGGSFAREIEAAGEGALAAQAIDDVAALLGNDIRRSLKPLAESRWGADPFARGAYSHA HHCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCC LPGHADKRALLAAPVDDRLSFAGEATPPDFFSTAHGARDSGERAAREALAWLGKR CCCCCCCCEEEECCCHHHHHCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA