| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337414
Identifier: 146337414
GI number: 146337414
Start: 268594
End: 269769
Strand: Direct
Name: 146337414
Synonym: BRADO0252
Alternate gene names: NA
Gene position: 268594-269769 (Clockwise)
Preceding gene: 146337413
Following gene: 146337417
Centisome position: 3.6
GC content: 65.73
Gene sequence:
>1176_bases ATGCGACGTCTGATTGGAGCGGCCGTGGCCGCAGTGCTGATTGCGTGCGGCTTTGCTGCCCACGCCGAGGAGAGCGAGTT CGATCCGGCCAAGGTCAGCGACAGCCTGAAGGCGATCTTCCAGTTCGGCTCGGTGCAGACCAAGCAGGCGCTCAACGCCA ACACGGTCACCCTGATCACCGGCACCATTGGCGGGACCTATGTGCAGTTCGGCGCCGACCTCGCCTCGCTGCTCGATGAC GGCAACAGCCTGCGCGTGCTGCCGATCGTCGGCCGCGGCTCGGTGCAGAGCGTCGCAGACATCCTGTTCCTGCAGGGCGT CGATCTCGGCGTCGTGCGCGCCGACACGCTGGACTATCTGGAGCGCAAGGGCTTCGCCAAGGACATCAAGAAGCAGTTCA CCTACGTCACCAAGCTCTACAATGAGGAGATGCAGGTCATCGCGCCGCGCGCCGTGCGCAATCTGCGCGACCTCGAAGGC CGCCGCGTCAGCGTCGACCTGCCGAACGGCGGCACCTTCGTGACGGCGCTGACGGTGTTCGAGCGGCTCGGCCTGCGCGC CAACTTCCTCTACATCGAGCAGCGCATCGCGATGGAGAAGCTGAAGCGGGGCGAACTCGATGCCGTGATCGTGGTCGGCG GCAAGCCCTACAAGTCGGTCTCGAACTTCGTGAACGACGGCCGCTTCCATCTCGTCAATGTCGACTATGACCGTCCGCTG CAGAATGACTATCTGCCGGCGACGCTGACGGCGAAGGACTATCCGAACCTGATCGCCGAGGGCGAGAAGGTCGACACGAT CGCGGTGCCGGCGGTGCTCGCGGCGTACAACTGGGCGCCGAACACCGACCGCTATCGCAAGCTCGCGACCTTCGTCGACG CCTTCTTCACCAAGTTCCCGGCGTTCCAGAACCCGCCCTTCCACCCGAAGTGGAAGGAAGTCTCGCTGTCAGCGCCGCTC GCCGGCTGGCAGCGGCTGCCGGCCGCCAGCAAATGGCTGGAGACGCATGCGATGGAAGGTGCGCAGCGCGACCGCTTCGA CGACTTCCTGAAGCAGAGCAGCGCCGGCAAGGCGCTGCCGACCGAGGCCGACCGCGAAGCGCTGTTCAAGCAGTACCAGG CGTGGGAAGCCGAGAAGACCGGCAGCGCCCGTGCCCAGGCACGTCCGCAGCGCTGA
Upstream 100 bases:
>100_bases ACGCATGATTTTCGAGTCGGTCATGGGCAACGCCGGGGATGATCTGGCGTTGCGCCCGTTTCGGCCCGCGATCATGTGCC GGCTCAATCGAGGGTGACAC
Downstream 100 bases:
>100_bases GCTGACAGATCGCGCCGGCGCGATCGATGTCAGAAAGAAAAGCCCTGCGTACGCAGGGCTTTTTGTTTTTCGATGGCGTC GCAATGCGAGCCACCGCCAT
Product: putative TRAP-type transport system
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 391; Mature: 391
Protein sequence:
>391_residues MRRLIGAAVAAVLIACGFAAHAEESEFDPAKVSDSLKAIFQFGSVQTKQALNANTVTLITGTIGGTYVQFGADLASLLDD GNSLRVLPIVGRGSVQSVADILFLQGVDLGVVRADTLDYLERKGFAKDIKKQFTYVTKLYNEEMQVIAPRAVRNLRDLEG RRVSVDLPNGGTFVTALTVFERLGLRANFLYIEQRIAMEKLKRGELDAVIVVGGKPYKSVSNFVNDGRFHLVNVDYDRPL QNDYLPATLTAKDYPNLIAEGEKVDTIAVPAVLAAYNWAPNTDRYRKLATFVDAFFTKFPAFQNPPFHPKWKEVSLSAPL AGWQRLPAASKWLETHAMEGAQRDRFDDFLKQSSAGKALPTEADREALFKQYQAWEAEKTGSARAQARPQR
Sequences:
>Translated_391_residues MRRLIGAAVAAVLIACGFAAHAEESEFDPAKVSDSLKAIFQFGSVQTKQALNANTVTLITGTIGGTYVQFGADLASLLDD GNSLRVLPIVGRGSVQSVADILFLQGVDLGVVRADTLDYLERKGFAKDIKKQFTYVTKLYNEEMQVIAPRAVRNLRDLEG RRVSVDLPNGGTFVTALTVFERLGLRANFLYIEQRIAMEKLKRGELDAVIVVGGKPYKSVSNFVNDGRFHLVNVDYDRPL QNDYLPATLTAKDYPNLIAEGEKVDTIAVPAVLAAYNWAPNTDRYRKLATFVDAFFTKFPAFQNPPFHPKWKEVSLSAPL AGWQRLPAASKWLETHAMEGAQRDRFDDFLKQSSAGKALPTEADREALFKQYQAWEAEKTGSARAQARPQR >Mature_391_residues MRRLIGAAVAAVLIACGFAAHAEESEFDPAKVSDSLKAIFQFGSVQTKQALNANTVTLITGTIGGTYVQFGADLASLLDD GNSLRVLPIVGRGSVQSVADILFLQGVDLGVVRADTLDYLERKGFAKDIKKQFTYVTKLYNEEMQVIAPRAVRNLRDLEG RRVSVDLPNGGTFVTALTVFERLGLRANFLYIEQRIAMEKLKRGELDAVIVVGGKPYKSVSNFVNDGRFHLVNVDYDRPL QNDYLPATLTAKDYPNLIAEGEKVDTIAVPAVLAAYNWAPNTDRYRKLATFVDAFFTKFPAFQNPPFHPKWKEVSLSAPL AGWQRLPAASKWLETHAMEGAQRDRFDDFLKQSSAGKALPTEADREALFKQYQAWEAEKTGSARAQARPQR
Specific function: Unknown
COG id: COG2358
COG function: function code R; TRAP-type uncharacterized transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43296; Mature: 43296
Theoretical pI: Translated: 9.29; Mature: 9.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRLIGAAVAAVLIACGFAAHAEESEFDPAKVSDSLKAIFQFGSVQTKQALNANTVTLIT CCHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEE GTIGGTYVQFGADLASLLDDGNSLRVLPIVGRGSVQSVADILFLQGVDLGVVRADTLDYL ECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHH ERKGFAKDIKKQFTYVTKLYNEEMQVIAPRAVRNLRDLEGRRVSVDLPNGGTFVTALTVF HHCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH ERLGLRANFLYIEQRIAMEKLKRGELDAVIVVGGKPYKSVSNFVNDGRFHLVNVDYDRPL HHHCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCC QNDYLPATLTAKDYPNLIAEGEKVDTIAVPAVLAAYNWAPNTDRYRKLATFVDAFFTKFP CCCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC AFQNPPFHPKWKEVSLSAPLAGWQRLPAASKWLETHAMEGAQRDRFDDFLKQSSAGKALP CCCCCCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC TEADREALFKQYQAWEAEKTGSARAQARPQR CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MRRLIGAAVAAVLIACGFAAHAEESEFDPAKVSDSLKAIFQFGSVQTKQALNANTVTLIT CCHHHHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHCCCCEEEEEE GTIGGTYVQFGADLASLLDDGNSLRVLPIVGRGSVQSVADILFLQGVDLGVVRADTLDYL ECCCCHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHCCCCEEEEEHHHHHHH ERKGFAKDIKKQFTYVTKLYNEEMQVIAPRAVRNLRDLEGRRVSVDLPNGGTFVTALTVF HHCCHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHH ERLGLRANFLYIEQRIAMEKLKRGELDAVIVVGGKPYKSVSNFVNDGRFHLVNVDYDRPL HHHCCCEEHHHHHHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHCCCCEEEEEECCCCCC QNDYLPATLTAKDYPNLIAEGEKVDTIAVPAVLAAYNWAPNTDRYRKLATFVDAFFTKFP CCCCCCEEEECCCCCHHHHCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCC AFQNPPFHPKWKEVSLSAPLAGWQRLPAASKWLETHAMEGAQRDRFDDFLKQSSAGKALP CCCCCCCCCCCCCEEECCCCHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCC TEADREALFKQYQAWEAEKTGSARAQARPQR CCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA