BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

Click here to switch to the map view.

The map label for this gene is ucpA [C]

Identifier: 146337394

GI number: 146337394

Start: 245029

End: 245787

Strand: Reverse

Name: ucpA [C]

Synonym: BRADO0228

Alternate gene names: 146337394

Gene position: 245787-245029 (Counterclockwise)

Preceding gene: 146337396

Following gene: 146337392

Centisome position: 3.3

GC content: 68.64

Gene sequence:

>759_bases
ATGACCAAGGGGAAACGAATCGCCTGGATCACGGGCGGCGGCACGGGGATCGGCGAGGCCGGAGCGCTGGCGCTGGCGGC
AGATGGCTGGACGGTGGTGGTGTCCGGCCGGCGCAAGGCGGTGCTGGATGCCGTGGTGGCCCGGATCGTGGCGGATGGCG
GCACGGCGGAAGCCATCGCGCTCGACGTCGCCAAGTCCGCCGACGCGCAGGCCGCGGCCGACGCCATCCTGATGCGTCAC
GGCCGCATCGACCTGCTGGTCAACTCCGCCGGCGTGAACGTGCCGCGGCGGCGCTGGGACGACATGACGCTCGACGGCTG
GAATCAGCTGGTCGAGATCAATCTCAACGGCGTGCTGTATTGCATGAAGGCGGTGCTGCCGGCGATGCGCAAGCAGCGGG
ACGGCACCATCATCAACGTCTCGTCCTGGGCCGGGCGCCACGTCTCGAAGATGCCGGGCCCGGCCTACACTTCGACCAAG
CACGCGGTGCTGGCGCTGACGCATTCGTTCAACATGGAGGAATGTATCAACGGCCTGCGCGCCTGCTGCCTGATGCCGGG
CGAGGTGGCGACGCCGATCCTGGAACAGCGCCCGGTCGTGCCGAGCGCCGAGGAGCAGGCCCGGATGCTGCAGCCGGAGG
ATCTCGGCCGGACCATCGCGTTCGTGGCCAGCATGCCGCCGCGGGTGTGCGTGAACGAGATCCTGATCAGCCCGACATGG
AATCGGGGATTCATCCAGACGCCGGCGAACAGGGAGTGA

Upstream 100 bases:

>100_bases
CCGGGACGGATGGCAGCGGCGACGTCGCCGGGATTGCCGTCTCTGATCGAGGCTGCCTTAGCAAAAACGCCCTTTCGAAG
GCAACGGGAGACGCTGGGAT

Downstream 100 bases:

>100_bases
GGGGCGCGCAACGACGCGGTCGTTGCGAGGCGCCAGCGCAAGCAGAGGCCTTTTTGAGCGACGTGAAGACCACTCTGGTT
CCCAGCAATCGGTGTCGTCC

Product: putative 3-oxoacyl-[acyl-carrier-protein] reductase 1 (fabG1)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MTKGKRIAWITGGGTGIGEAGALALAADGWTVVVSGRRKAVLDAVVARIVADGGTAEAIALDVAKSADAQAAADAILMRH
GRIDLLVNSAGVNVPRRRWDDMTLDGWNQLVEINLNGVLYCMKAVLPAMRKQRDGTIINVSSWAGRHVSKMPGPAYTSTK
HAVLALTHSFNMEECINGLRACCLMPGEVATPILEQRPVVPSAEEQARMLQPEDLGRTIAFVASMPPRVCVNEILISPTW
NRGFIQTPANRE

Sequences:

>Translated_252_residues
MTKGKRIAWITGGGTGIGEAGALALAADGWTVVVSGRRKAVLDAVVARIVADGGTAEAIALDVAKSADAQAAADAILMRH
GRIDLLVNSAGVNVPRRRWDDMTLDGWNQLVEINLNGVLYCMKAVLPAMRKQRDGTIINVSSWAGRHVSKMPGPAYTSTK
HAVLALTHSFNMEECINGLRACCLMPGEVATPILEQRPVVPSAEEQARMLQPEDLGRTIAFVASMPPRVCVNEILISPTW
NRGFIQTPANRE
>Mature_251_residues
TKGKRIAWITGGGTGIGEAGALALAADGWTVVVSGRRKAVLDAVVARIVADGGTAEAIALDVAKSADAQAAADAILMRHG
RIDLLVNSAGVNVPRRRWDDMTLDGWNQLVEINLNGVLYCMKAVLPAMRKQRDGTIINVSSWAGRHVSKMPGPAYTSTKH
AVLALTHSFNMEECINGLRACCLMPGEVATPILEQRPVVPSAEEQARMLQPEDLGRTIAFVASMPPRVCVNEILISPTWN
RGFIQTPANRE

Specific function: Unknown

COG id: COG4221

COG function: function code R; Short-chain alcohol dehydrogenase of unknown specificity

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI109715829, Length=246, Percent_Identity=30.0813008130081, Blast_Score=100, Evalue=1e-21,
Organism=Homo sapiens, GI32483357, Length=239, Percent_Identity=30.5439330543933, Blast_Score=98, Evalue=9e-21,
Organism=Homo sapiens, GI59889578, Length=177, Percent_Identity=32.7683615819209, Blast_Score=94, Evalue=1e-19,
Organism=Homo sapiens, GI7706318, Length=195, Percent_Identity=32.3076923076923, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI33667109, Length=186, Percent_Identity=31.7204301075269, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI126723191, Length=180, Percent_Identity=32.7777777777778, Blast_Score=81, Evalue=7e-16,
Organism=Homo sapiens, GI5031737, Length=186, Percent_Identity=31.7204301075269, Blast_Score=81, Evalue=1e-15,
Organism=Homo sapiens, GI20149619, Length=194, Percent_Identity=30.9278350515464, Blast_Score=78, Evalue=8e-15,
Organism=Homo sapiens, GI15277342, Length=233, Percent_Identity=28.3261802575107, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI126723750, Length=232, Percent_Identity=28.0172413793103, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI66933014, Length=159, Percent_Identity=32.7044025157233, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI31542939, Length=255, Percent_Identity=29.0196078431373, Blast_Score=71, Evalue=1e-12,
Organism=Homo sapiens, GI19923817, Length=193, Percent_Identity=28.4974093264249, Blast_Score=69, Evalue=6e-12,
Organism=Homo sapiens, GI40254992, Length=193, Percent_Identity=29.5336787564767, Blast_Score=68, Evalue=1e-11,
Organism=Homo sapiens, GI4504505, Length=177, Percent_Identity=29.9435028248588, Blast_Score=65, Evalue=5e-11,
Organism=Escherichia coli, GI87082100, Length=235, Percent_Identity=33.1914893617021, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1788459, Length=203, Percent_Identity=31.0344827586207, Blast_Score=89, Evalue=2e-19,
Organism=Escherichia coli, GI1786812, Length=249, Percent_Identity=26.9076305220884, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787335, Length=238, Percent_Identity=27.7310924369748, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI2367175, Length=191, Percent_Identity=30.3664921465969, Blast_Score=79, Evalue=3e-16,
Organism=Escherichia coli, GI1787905, Length=227, Percent_Identity=28.1938325991189, Blast_Score=79, Evalue=4e-16,
Organism=Escherichia coli, GI1787820, Length=240, Percent_Identity=25.4166666666667, Blast_Score=71, Evalue=6e-14,
Organism=Escherichia coli, GI87082160, Length=197, Percent_Identity=27.4111675126904, Blast_Score=68, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI193204405, Length=238, Percent_Identity=30.2521008403361, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538480, Length=240, Percent_Identity=28.3333333333333, Blast_Score=86, Evalue=2e-17,
Organism=Caenorhabditis elegans, GI17538486, Length=202, Percent_Identity=29.7029702970297, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17551412, Length=243, Percent_Identity=28.3950617283951, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71994604, Length=191, Percent_Identity=30.3664921465969, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17560332, Length=243, Percent_Identity=25.5144032921811, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17559104, Length=244, Percent_Identity=27.0491803278689, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17563726, Length=238, Percent_Identity=27.3109243697479, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI71994600, Length=196, Percent_Identity=30.1020408163265, Blast_Score=77, Evalue=6e-15,
Organism=Caenorhabditis elegans, GI72000259, Length=242, Percent_Identity=27.2727272727273, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17561402, Length=243, Percent_Identity=26.7489711934156, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17560676, Length=227, Percent_Identity=26.8722466960352, Blast_Score=75, Evalue=4e-14,
Organism=Caenorhabditis elegans, GI17562910, Length=238, Percent_Identity=27.3109243697479, Blast_Score=74, Evalue=5e-14,
Organism=Caenorhabditis elegans, GI25147288, Length=232, Percent_Identity=29.3103448275862, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI17508895, Length=195, Percent_Identity=27.1794871794872, Blast_Score=74, Evalue=7e-14,
Organism=Caenorhabditis elegans, GI17562908, Length=240, Percent_Identity=28.75, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=225, Percent_Identity=25.7777777777778, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17560150, Length=238, Percent_Identity=26.4705882352941, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17564282, Length=171, Percent_Identity=28.6549707602339, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI17568967, Length=194, Percent_Identity=30.9278350515464, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI17562906, Length=238, Percent_Identity=26.0504201680672, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI17544670, Length=249, Percent_Identity=24.4979919678715, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=238, Percent_Identity=26.4705882352941, Blast_Score=68, Evalue=4e-12,
Organism=Caenorhabditis elegans, GI17562990, Length=238, Percent_Identity=26.0504201680672, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17565030, Length=240, Percent_Identity=24.5833333333333, Blast_Score=68, Evalue=5e-12,
Organism=Caenorhabditis elegans, GI17562904, Length=193, Percent_Identity=27.4611398963731, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI17531453, Length=238, Percent_Identity=25.2100840336134, Blast_Score=65, Evalue=3e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=248, Percent_Identity=26.6129032258064, Blast_Score=74, Evalue=2e-14,
Organism=Saccharomyces cerevisiae, GI6322861, Length=177, Percent_Identity=30.5084745762712, Blast_Score=67, Evalue=3e-12,
Organism=Drosophila melanogaster, GI116007236, Length=242, Percent_Identity=30.1652892561983, Blast_Score=100, Evalue=1e-21,
Organism=Drosophila melanogaster, GI23397609, Length=212, Percent_Identity=34.4339622641509, Blast_Score=92, Evalue=3e-19,
Organism=Drosophila melanogaster, GI24641232, Length=246, Percent_Identity=31.3008130081301, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24639444, Length=252, Percent_Identity=29.3650793650794, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI21357041, Length=232, Percent_Identity=29.7413793103448, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21355319, Length=226, Percent_Identity=26.1061946902655, Blast_Score=85, Evalue=4e-17,
Organism=Drosophila melanogaster, GI28571526, Length=234, Percent_Identity=31.1965811965812, Blast_Score=84, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24641388, Length=249, Percent_Identity=30.5220883534137, Blast_Score=80, Evalue=1e-15,
Organism=Drosophila melanogaster, GI116007234, Length=243, Percent_Identity=30.4526748971193, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24644339, Length=195, Percent_Identity=29.2307692307692, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI28571387, Length=242, Percent_Identity=31.404958677686, Blast_Score=78, Evalue=4e-15,
Organism=Drosophila melanogaster, GI24648693, Length=251, Percent_Identity=28.6852589641434, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI21355889, Length=251, Percent_Identity=28.6852589641434, Blast_Score=77, Evalue=9e-15,
Organism=Drosophila melanogaster, GI116007238, Length=175, Percent_Identity=29.7142857142857, Blast_Score=74, Evalue=6e-14,
Organism=Drosophila melanogaster, GI18859837, Length=190, Percent_Identity=30.5263157894737, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI281364494, Length=243, Percent_Identity=27.1604938271605, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24580925, Length=200, Percent_Identity=30, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21358495, Length=193, Percent_Identity=27.4611398963731, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21356301, Length=220, Percent_Identity=26.8181818181818, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI24663911, Length=243, Percent_Identity=25.5144032921811, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI17737361, Length=204, Percent_Identity=26.9607843137255, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24656154, Length=242, Percent_Identity=29.7520661157025, Blast_Score=65, Evalue=6e-11,
Organism=Drosophila melanogaster, GI19922628, Length=242, Percent_Identity=29.7520661157025, Blast_Score=65, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27017; Mature: 26885

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
6.0 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKGKRIAWITGGGTGIGEAGALALAADGWTVVVSGRRKAVLDAVVARIVADGGTAEAIA
CCCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEE
LDVAKSADAQAAADAILMRHGRIDLLVNSAGVNVPRRRWDDMTLDGWNQLVEINLNGVLY
EEHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECCCHHHH
CMKAVLPAMRKQRDGTIINVSSWAGRHVSKMPGPAYTSTKHAVLALTHSFNMEECINGLR
HHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
ACCLMPGEVATPILEQRPVVPSAEEQARMLQPEDLGRTIAFVASMPPRVCVNEILISPTW
HHHCCCCHHHCHHHHCCCCCCCCHHHHHCCCCHHHCHHEEHHHCCCHHHHHHHHHCCCCC
NRGFIQTPANRE
CCCEECCCCCCC
>Mature Secondary Structure 
TKGKRIAWITGGGTGIGEAGALALAADGWTVVVSGRRKAVLDAVVARIVADGGTAEAIA
CCCCEEEEEECCCCCCCCCCEEEEEECCEEEEECCCHHHHHHHHHHHHHCCCCCCCEEE
LDVAKSADAQAAADAILMRHGRIDLLVNSAGVNVPRRRWDDMTLDGWNQLVEINLNGVLY
EEHHHCCCHHHHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCCCCCEEEEECCCHHHH
CMKAVLPAMRKQRDGTIINVSSWAGRHVSKMPGPAYTSTKHAVLALTHSFNMEECINGLR
HHHHHHHHHHHHCCCCEEEECCCCCCHHHCCCCCCCCCCCCEEEEEECCCCHHHHHHHHH
ACCLMPGEVATPILEQRPVVPSAEEQARMLQPEDLGRTIAFVASMPPRVCVNEILISPTW
HHHCCCCHHHCHHHHCCCCCCCCHHHHHCCCCHHHCHHEEHHHCCCHHHHHHHHHCCCCC
NRGFIQTPANRE
CCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA