| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is 146337303
Identifier: 146337303
GI number: 146337303
Start: 147572
End: 148357
Strand: Reverse
Name: 146337303
Synonym: BRADO0132
Alternate gene names: NA
Gene position: 148357-147572 (Counterclockwise)
Preceding gene: 146337305
Following gene: 146337300
Centisome position: 1.99
GC content: 69.59
Gene sequence:
>786_bases ATGAACCAAGCTGCAGAAACGACCGATCTCCCCGCCTTCATCACCGTCGGCATCGCCGAGTCCGCGCGCCAGATCGCGGT GCGTGCACGTTCGGGGACGGCACCGGGGCTGTTCTGGCTCGGCGGCTTCAATTCCGACATGAAGGGCACCAAGGCGGTCG CGCTCGAAGCCTGGGCGGCCGAGCGCGGCCGCGCCTGCGTCCGGTTCGACTATTCCGGCCATGGCGAGTCCGGCGGCCGC TTCGTCGACGGCACGATCGGCCGTTGGCTGGAGGAGAGCGTGGCGGTGTTCCGGCAGTTCTGCCGCGGGCCCCAGGTCGT GATCGGCTCGTCGATGGGCGGCTGGATGGCGCTGCTGCTGGCGCGCGAGCTCTCGAAGCACCCCGGCGAGGCGACGCTGG CCGGGATGGTCCTGATCGCGCCAGCCCCCGACTTTACCGAGGAGCTGATGTGGAGAGGCTTCTCGCTGGAGGTCCGCCGG GAGATCGAGACCAACGGCGTCTGGATGCGGCCGTCCGAGTATGGCGAACCCTATCCGATCACGCGGGCGCTGATCGAGGA CGGCCGCCATCACCTGCTGCTCGGCAGCGCCATCAATGTCGGCTGCCCCGTCCGCATCCTGCAAGGCGCGCAGGACCCGG ACGTGCCGTGGCAGCACGCCTTCGCGCTGGCGCAACGGTTGCCTGCTGAGGATGTGGTGCTCACCATGATCCAGGACGGC GACCACCGGCTGTCGCGGCCGCAGGACATCGCGCGCATGCTGGCCGCGGTCGGCGAGATGGGGTGA
Upstream 100 bases:
>100_bases AGAGTGCGCAAGGCCCTTTCGCAAGCGGCAGCCTCGCACCGACCCGATTGACGGAGAACGTCGGTTCGCCCACACAACGT CCGCCACCGGGTAACGATCC
Downstream 100 bases:
>100_bases GGCGGCAGTGCTCAGCATCCGGCTTCCCACTCGGCGCGGACGCCATCATCGGCTTCGATCGCCAGCGCCGCGTCGGCCGC TTGCGCGAAGGCGTGGCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 261; Mature: 261
Protein sequence:
>261_residues MNQAAETTDLPAFITVGIAESARQIAVRARSGTAPGLFWLGGFNSDMKGTKAVALEAWAAERGRACVRFDYSGHGESGGR FVDGTIGRWLEESVAVFRQFCRGPQVVIGSSMGGWMALLLARELSKHPGEATLAGMVLIAPAPDFTEELMWRGFSLEVRR EIETNGVWMRPSEYGEPYPITRALIEDGRHHLLLGSAINVGCPVRILQGAQDPDVPWQHAFALAQRLPAEDVVLTMIQDG DHRLSRPQDIARMLAAVGEMG
Sequences:
>Translated_261_residues MNQAAETTDLPAFITVGIAESARQIAVRARSGTAPGLFWLGGFNSDMKGTKAVALEAWAAERGRACVRFDYSGHGESGGR FVDGTIGRWLEESVAVFRQFCRGPQVVIGSSMGGWMALLLARELSKHPGEATLAGMVLIAPAPDFTEELMWRGFSLEVRR EIETNGVWMRPSEYGEPYPITRALIEDGRHHLLLGSAINVGCPVRILQGAQDPDVPWQHAFALAQRLPAEDVVLTMIQDG DHRLSRPQDIARMLAAVGEMG >Mature_261_residues MNQAAETTDLPAFITVGIAESARQIAVRARSGTAPGLFWLGGFNSDMKGTKAVALEAWAAERGRACVRFDYSGHGESGGR FVDGTIGRWLEESVAVFRQFCRGPQVVIGSSMGGWMALLLARELSKHPGEATLAGMVLIAPAPDFTEELMWRGFSLEVRR EIETNGVWMRPSEYGEPYPITRALIEDGRHHLLLGSAINVGCPVRILQGAQDPDVPWQHAFALAQRLPAEDVVLTMIQDG DHRLSRPQDIARMLAAVGEMG
Specific function: Unknown
COG id: COG0596
COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI8923001, Length=239, Percent_Identity=34.3096234309623, Blast_Score=164, Evalue=6e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28440; Mature: 28440
Theoretical pI: Translated: 5.65; Mature: 5.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQAAETTDLPAFITVGIAESARQIAVRARSGTAPGLFWLGGFNSDMKGTKAVALEAWAA CCCCCCCCCCCEEEEEEHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHH ERGRACVRFDYSGHGESGGRFVDGTIGRWLEESVAVFRQFCRGPQVVIGSSMGGWMALLL HHCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH ARELSKHPGEATLAGMVLIAPAPDFTEELMWRGFSLEVRREIETNGVWMRPSEYGEPYPI HHHHHCCCCCEEEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCEEECCHHCCCCCHH TRALIEDGRHHLLLGSAINVGCPVRILQGAQDPDVPWQHAFALAQRLPAEDVVLTMIQDG HHHHHHCCCCEEEEECCCCCCCCHHEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC DHRLSRPQDIARMLAAVGEMG CCCCCCHHHHHHHHHHHHCCC >Mature Secondary Structure MNQAAETTDLPAFITVGIAESARQIAVRARSGTAPGLFWLGGFNSDMKGTKAVALEAWAA CCCCCCCCCCCEEEEEEHHHHHHHHEEEECCCCCCCEEEECCCCCCCCCCHHHHHHHHHH ERGRACVRFDYSGHGESGGRFVDGTIGRWLEESVAVFRQFCRGPQVVIGSSMGGWMALLL HHCCEEEEEECCCCCCCCCEEECCHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHH ARELSKHPGEATLAGMVLIAPAPDFTEELMWRGFSLEVRREIETNGVWMRPSEYGEPYPI HHHHHCCCCCEEEEEEEEEECCCCHHHHHHHCCCCEEEEEECCCCCEEECCHHCCCCCHH TRALIEDGRHHLLLGSAINVGCPVRILQGAQDPDVPWQHAFALAQRLPAEDVVLTMIQDG HHHHHHCCCCEEEEECCCCCCCCHHEECCCCCCCCCHHHHHHHHHHCCCCCEEEEEECCC DHRLSRPQDIARMLAAVGEMG CCCCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA