| Definition | Bradyrhizobium sp. ORS278 chromosome, complete genome. |
|---|---|
| Accession | NC_009445 |
| Length | 7,456,587 |
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The map label for this gene is qheDH [H]
Identifier: 146337296
GI number: 146337296
Start: 137689
End: 139410
Strand: Reverse
Name: qheDH [H]
Synonym: BRADO0123
Alternate gene names: 146337296
Gene position: 139410-137689 (Counterclockwise)
Preceding gene: 146337298
Following gene: 146337295
Centisome position: 1.87
GC content: 65.45
Gene sequence:
>1722_bases ATGATGAAGCAACGGAGACGTCTGGCTGCGCCCATCGCGCTTGCCATCACCACGACACTGGCCGCGTCGGTGGCCGCGGC ACAAACGGTCGATACGGCGCGCATCGAAGCCGGCGGCCAGAACGACTGGCTGACCTACCACGGCTCCTACAAGTCCTATC ACTACAGTCCGCTCGCGCAGATCAACGCCAGCAATGTCGGCAATCTCGGCGTCGCCTGGATTCACATCCCCGGACGCTCC ACCCGCGGTTTGCAGTCGATGCCGCTGGCCGCCGACGGCGTGCTCTACTACACCGGTTCCTACAGCCGCGTGTTTGCGCT GAACGGCGCCACCGGCGAGGTGATCTGGTCCTACTTCCCCGAGCTGGACGAGGCGCTGGTCGCGCGGCAGACCCACTCGC CCTACAATCGCGGCGTCGCCATCGGCGAAGGCAAGGTGTTCGTCGGCACCATGGACGGCCGGCTGATCGCGCTCGACATG AAGACCGGCAAGCTGGCCTGGGAGACCAAGCTGCTCGACTCGCAGAAGCTGACGGTCGGCTTCACCGGCGCGCCGCTCTA TGCCAATGGCAATGTCGTGATCGGCGCGCAGGGCGGCGAATGGCCGGGCCGCGGCCCGATCTTCGGCGTCAACGCCGCGA CCGGCGCGAAGAAGTGGGAGTTCCTGACGGTCGCCGGCACCGACGAGGCCCAGAAGAGCTGGGGCAATGATTCCTGGCGT ACCGGCGGCGGTGGCGGCTGGATGCCCGGCACCTATGACAGCGAGACCTCGACGGTCTGGTGGGGCACCGCCAACCCGGC GCCGCTCTACGACTGGTCGGGCGGCGACTGGAAGACACAAGGCGCGCGCCCCGGCGACAATCTCTACACGTCGTCGGTGA TCGGCCTCGATATCGACAGCGGCAAGCTGAAATTCCATCACCAGGAGCTGCCGCACGATGCCTGGGATTTCGACAGCGCG GTCGGCGAGTTCGTGATGCTCGATCGCGACGGCAAGAAGCTGACGGTCCATCCCAACAAGAGCGGCTACATCTTCGTCTA TGACCGCGAAGCGAAGGTGCAGAACGTCTGGCGCATCACCGAGAACAGCAACTTCGTCAAGAACATCGACCCCAAGACCG GTGAGCTGATCGGGCGCCGCGACTTCACCGCCGGCAAGGTGTCCGAGCCGCTCTGCCCGCACATCTCCGGCGGCGTCAGC TGGAACGCCGGCTCCTACAATCCGAAGACGGGCCTGTACTACAAGCTCGGTCAGGAATGGTGTATGACGCTCGACATCGT CAAGACGACGCCGGTGGTGGCGCCGCAGGCGCAGCTGAACATCGGGGCCAACTTCGCAATCGCCAAGCCGCCGGGCGGCG AGATCTACGGCCATCTCGATGCCCGGGATCCCGTCACCGGCGCCAAAAAGTGGGAGGTGCGCTTCCCCGAGCCGCCGCTC GCCAGCGTGCTCTCGACCGGCGGCAATCTCGTGTTCGTGCCGGATTCGCGCGGCACGGTTCACGCCTATGATGCCGAGAG CGGCACCGAGCTGTGGAATCACTCCGACGGCACCGGCCATCAGGGCGGCATCATCAGCTATGCGGTCAATGGCAAGCAGT ACATCGCCATCACGGCCGGCTTCGGCGGCATGGCGGCCGACGACTATGCTCCGACCTTCGGCGGCGTCTACAAGAGCATG CCGAGGGATGACGGCGCGCTCATCGTCTATAGCCTGAAGTAA
Upstream 100 bases:
>100_bases CGGCGCATCACACGAGCTCGGCGTAGCGGCAGACGATCCGGCGAAGGCGGCGCGCGACAACGCGGCGGCCACACATCAAG AACGTAGCGGAGGAAGTGCC
Downstream 100 bases:
>100_bases ATCATTGGAGATCGCGGGGGCCGGTTTCGCCGGTCCCCGTGCTCTGCGCTGGCTGTCACGAATGGAGGCCGGGCTGTCGT CAAAACCATTGTGGCAGTTA
Product: putative quinoprotein ethanol dehydrogenase family protein
Products: NA
Alternate protein names: QH-EDH1; Quinohaemoprotein ethanol dehydrogenase type I [H]
Number of amino acids: Translated: 573; Mature: 573
Protein sequence:
>573_residues MMKQRRRLAAPIALAITTTLAASVAAAQTVDTARIEAGGQNDWLTYHGSYKSYHYSPLAQINASNVGNLGVAWIHIPGRS TRGLQSMPLAADGVLYYTGSYSRVFALNGATGEVIWSYFPELDEALVARQTHSPYNRGVAIGEGKVFVGTMDGRLIALDM KTGKLAWETKLLDSQKLTVGFTGAPLYANGNVVIGAQGGEWPGRGPIFGVNAATGAKKWEFLTVAGTDEAQKSWGNDSWR TGGGGGWMPGTYDSETSTVWWGTANPAPLYDWSGGDWKTQGARPGDNLYTSSVIGLDIDSGKLKFHHQELPHDAWDFDSA VGEFVMLDRDGKKLTVHPNKSGYIFVYDREAKVQNVWRITENSNFVKNIDPKTGELIGRRDFTAGKVSEPLCPHISGGVS WNAGSYNPKTGLYYKLGQEWCMTLDIVKTTPVVAPQAQLNIGANFAIAKPPGGEIYGHLDARDPVTGAKKWEVRFPEPPL ASVLSTGGNLVFVPDSRGTVHAYDAESGTELWNHSDGTGHQGGIISYAVNGKQYIAITAGFGGMAADDYAPTFGGVYKSM PRDDGALIVYSLK
Sequences:
>Translated_573_residues MMKQRRRLAAPIALAITTTLAASVAAAQTVDTARIEAGGQNDWLTYHGSYKSYHYSPLAQINASNVGNLGVAWIHIPGRS TRGLQSMPLAADGVLYYTGSYSRVFALNGATGEVIWSYFPELDEALVARQTHSPYNRGVAIGEGKVFVGTMDGRLIALDM KTGKLAWETKLLDSQKLTVGFTGAPLYANGNVVIGAQGGEWPGRGPIFGVNAATGAKKWEFLTVAGTDEAQKSWGNDSWR TGGGGGWMPGTYDSETSTVWWGTANPAPLYDWSGGDWKTQGARPGDNLYTSSVIGLDIDSGKLKFHHQELPHDAWDFDSA VGEFVMLDRDGKKLTVHPNKSGYIFVYDREAKVQNVWRITENSNFVKNIDPKTGELIGRRDFTAGKVSEPLCPHISGGVS WNAGSYNPKTGLYYKLGQEWCMTLDIVKTTPVVAPQAQLNIGANFAIAKPPGGEIYGHLDARDPVTGAKKWEVRFPEPPL ASVLSTGGNLVFVPDSRGTVHAYDAESGTELWNHSDGTGHQGGIISYAVNGKQYIAITAGFGGMAADDYAPTFGGVYKSM PRDDGALIVYSLK >Mature_573_residues MMKQRRRLAAPIALAITTTLAASVAAAQTVDTARIEAGGQNDWLTYHGSYKSYHYSPLAQINASNVGNLGVAWIHIPGRS TRGLQSMPLAADGVLYYTGSYSRVFALNGATGEVIWSYFPELDEALVARQTHSPYNRGVAIGEGKVFVGTMDGRLIALDM KTGKLAWETKLLDSQKLTVGFTGAPLYANGNVVIGAQGGEWPGRGPIFGVNAATGAKKWEFLTVAGTDEAQKSWGNDSWR TGGGGGWMPGTYDSETSTVWWGTANPAPLYDWSGGDWKTQGARPGDNLYTSSVIGLDIDSGKLKFHHQELPHDAWDFDSA VGEFVMLDRDGKKLTVHPNKSGYIFVYDREAKVQNVWRITENSNFVKNIDPKTGELIGRRDFTAGKVSEPLCPHISGGVS WNAGSYNPKTGLYYKLGQEWCMTLDIVKTTPVVAPQAQLNIGANFAIAKPPGGEIYGHLDARDPVTGAKKWEVRFPEPPL ASVLSTGGNLVFVPDSRGTVHAYDAESGTELWNHSDGTGHQGGIISYAVNGKQYIAITAGFGGMAADDYAPTFGGVYKSM PRDDGALIVYSLK
Specific function: Catalyzes the dye-linked oxidation of primary alcohols to the corresponding aldehydes and the (subsequent) oxidation of the aldehydes to carboxylic acids [H]
COG id: COG4993
COG function: function code G; Glucose dehydrogenase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 cytochrome c domain [H]
Homologues:
Organism=Escherichia coli, GI1786316, Length=376, Percent_Identity=27.3936170212766, Blast_Score=106, Evalue=3e-24,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009056 - InterPro: IPR019556 - InterPro: IPR019551 - InterPro: IPR018391 - InterPro: IPR017512 - InterPro: IPR002372 - InterPro: IPR011047 - InterPro: IPR001479 [H]
Pfam domain/function: PF01011 PQQ; PF10535 PQQ_C; PF10527 PQQ_N [H]
EC number: =1.1.98.1 [H]
Molecular weight: Translated: 61746; Mature: 61746
Theoretical pI: Translated: 6.85; Mature: 6.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKQRRRLAAPIALAITTTLAASVAAAQTVDTARIEAGGQNDWLTYHGSYKSYHYSPLAQ CCCHHHHHCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCEEECCCCEE INASNVGNLGVAWIHIPGRSTRGLQSMPLAADGVLYYTGSYSRVFALNGATGEVIWSYFP ECCCCCCCCEEEEEEECCCCCCCCCCCCCEECCEEEEECCCEEEEEECCCCHHHHHHHHH ELDEALVARQTHSPYNRGVAIGEGKVFVGTMDGRLIALDMKTGKLAWETKLLDSQKLTVG HHHHHHHHHHCCCCHHCCEEEECCEEEEEECCCEEEEEEECCCCEEEEEEECCCCEEEEE FTGAPLYANGNVVIGAQGGEWPGRGPIFGVNAATGAKKWEFLTVAGTDEAQKSWGNDSWR ECCCCEEECCCEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCCC TGGGGGWMPGTYDSETSTVWWGTANPAPLYDWSGGDWKTQGARPGDNLYTSSVIGLDIDS CCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEECCCCCCCCCEEECEEEEEEECC GKLKFHHQELPHDAWDFDSAVGEFVMLDRDGKKLTVHPNKSGYIFVYDREAKVQNVWRIT CEEEEEHHHCCCCCCCHHHCCCEEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEE ENSNFVKNIDPKTGELIGRRDFTAGKVSEPLCPHISGGVSWNAGSYNPKTGLYYKLGQEW CCCCEEECCCCCCHHEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCE CMTLDIVKTTPVVAPQAQLNIGANFAIAKPPGGEIYGHLDARDPVTGAKKWEVRFPEPPL EEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCH ASVLSTGGNLVFVPDSRGTVHAYDAESGTELWNHSDGTGHQGGIISYAVNGKQYIAITAG HHHHHCCCCEEEEECCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEECCCEEEEEEEC FGGMAADDYAPTFGGVYKSMPRDDGALIVYSLK CCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEC >Mature Secondary Structure MMKQRRRLAAPIALAITTTLAASVAAAQTVDTARIEAGGQNDWLTYHGSYKSYHYSPLAQ CCCHHHHHCCCEEEEHHHHHHHHHHHHHHCCEEEEECCCCCCEEEECCCCCEEECCCCEE INASNVGNLGVAWIHIPGRSTRGLQSMPLAADGVLYYTGSYSRVFALNGATGEVIWSYFP ECCCCCCCCEEEEEEECCCCCCCCCCCCCEECCEEEEECCCEEEEEECCCCHHHHHHHHH ELDEALVARQTHSPYNRGVAIGEGKVFVGTMDGRLIALDMKTGKLAWETKLLDSQKLTVG HHHHHHHHHHCCCCHHCCEEEECCEEEEEECCCEEEEEEECCCCEEEEEEECCCCEEEEE FTGAPLYANGNVVIGAQGGEWPGRGPIFGVNAATGAKKWEFLTVAGTDEAQKSWGNDSWR ECCCCEEECCCEEEECCCCCCCCCCCEEEEECCCCCCCEEEEEEECCCHHHHHCCCCCCC TGGGGGWMPGTYDSETSTVWWGTANPAPLYDWSGGDWKTQGARPGDNLYTSSVIGLDIDS CCCCCCCCCCCCCCCCCEEEEECCCCCCEEECCCCCEECCCCCCCCCEEECEEEEEEECC GKLKFHHQELPHDAWDFDSAVGEFVMLDRDGKKLTVHPNKSGYIFVYDREAKVQNVWRIT CEEEEEHHHCCCCCCCHHHCCCEEEEEECCCCEEEECCCCCCEEEEECCCCCCCEEEEEE ENSNFVKNIDPKTGELIGRRDFTAGKVSEPLCPHISGGVSWNAGSYNPKTGLYYKLGQEW CCCCEEECCCCCCHHEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCEEEEECCCE CMTLDIVKTTPVVAPQAQLNIGANFAIAKPPGGEIYGHLDARDPVTGAKKWEVRFPEPPL EEEEEEEECCCCCCCCCEEECCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCH ASVLSTGGNLVFVPDSRGTVHAYDAESGTELWNHSDGTGHQGGIISYAVNGKQYIAITAG HHHHHCCCCEEEEECCCCEEEEECCCCCCHHHCCCCCCCCCCCEEEEEECCCEEEEEEEC FGGMAADDYAPTFGGVYKSMPRDDGALIVYSLK CCCCCCCCCCCCHHHHHHCCCCCCCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8654419; 7601151; 3521592; 11679760; 11714714 [H]