BacMap

Definition	Bradyrhizobium sp. ORS278 chromosome, complete genome.
Accession	NC_009445
Length	7,456,587

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The map label for this gene is gabD [H]

Identifier: 146337202

GI number: 146337202

Start: 32922

End: 34415

Strand: Reverse

Name: gabD [H]

Synonym: BRADO0028

Alternate gene names: 146337202

Gene position: 34415-32922 (Counterclockwise)

Preceding gene: 146337203

Following gene: 146337199

Centisome position: 0.46

GC content: 67.07

Gene sequence:

>1494_bases
ATGACCCCGCCCGCCGCCGCACGCGCGTCCGATGCCGCTTCCAGCCTGCGCGACCGCCTGAAGGACCCGTCGCTGCTGCG
CGAGCAGTGCTACATCGACGGCGCCTGGGTCGGTACGCCGGAGTTCGCGGTGAACAATCCCGCCACAGGCGCCGAGCTCG
CCAGGATCGCGCAGCTGGGCGCAGCGGAAACGACGCAGGCGGTCGAGGCCGCCGCGCGCGCCTTCCCGCTCTGGGCCAAG
CAGACCGCCAAGCAACGTTCCAATATCCTGCGCAAATGGTTCGAGCTGATCATTGCGAACCGCGAGGACCTCGCGCTGAT
CCTGACCTCTGAGCAGGGCAAGCCGCTTGCGGAAGCGCTCGGCGAGGTCGACATCGGCGCCGCCTATATCGAGTTCTTCG
CCGAGGAGGCGCGCCGCGTCTATGGCGAGACCATTCCGACGCAGAAGCCGGACGCGCGCCTCTTGGCGTTGAAGCAGCCG
ATCGGCGTCTGTGGCGCGATCACGCCGTGGAATTTCCCGAACTCGATGATCACCCGCAAGGTCTCCCCGGCACTCGCCGC
CGGCTGCACCGTGGTGCTGAAGCCGGCCAATGAGACGCCGCTCTCGGCGCTGGCGCTCGCCGTGCTGGCCGAGCGCGCCG
GAATTCCGAAGGGCGCGCTCAACATCGTCACGGGCGATGCGCCACCGATCGGCAAAGTGCTGTGCGAGCATCCGGCCGTG
CGCTTCGTCGGCTTCACCGGCTCGACCGAGGTCGGCAAGATCCTGTACCGCCAGTCGGCGGGCACGGTGAAGAAGCTCGG
TCTCGAGCTCGGGGGCAACGCGCCATTCGTGGTGTTCGACGATGCCGATGTCGATGCGGCCGTCGAAGGCGCCATCGTCT
CGAAATATCGCAACATGGGCCAGACCTGCGTCTGTGCCAACCGCCTCTACGCCCAGGATGGCATCTACGACGCCTTCGTC
GATAAGCTGGCGGCCAAGGTCGCGGCGATGAAGATCGGCGAGGGCACCGAGGCCGGCGTGACGCAGGGCCCGCTGATCAA
CGAGGATGCGGTCGAGAAGGTCGAGCGCCACATCGCCGATGCGGTCAAAGGCGGCGCCAAGATCGTCACCGGCGGCAAGC
GCCACGCGCTCGGCCGCACCTTCTTCGAGCCGACCGTGCTTCGCGATGTCAAGGCGGATGCGCTCGTCGCCCATGAGGAG
ACGTTCGGTCCGCTTGCGCCCGTGATCCGGTTCAAGGACGAGGCCGACGTGATCGCGATGTGCAACGCCTCGCCCTTCGG
CTTGGCATCGTATTTTTACGCCCGCGATCTCGGCCGCGTCTGGCGCGTCGCCGAGGCACTGGAGTCGGGCATGGTCGGCG
TCAACACCGGCCTGATCACGACAGAGGTCGCCCCGTTCGGCGGCGTCAAGGAAAGCGGCCTCGGGCGCGAAGGCTCCCAT
CACGGCATCGAGGAATATCTCGAGATCAAGTATGTGATGATGGCCGGGGTCTGA

Upstream 100 bases:

>100_bases
GGCGATCGAATGTACCGTTCGTGAGGCGCACACACGGTGCGCCTGCGCCGCGCGAGGGCTATATTCGGAGCAAGATACCG
ACGCTTCGAGGAGATGCCCG

Downstream 100 bases:

>100_bases
GCCCGGCCAGCCGACGGCTCAGGCCGTGATCGGCGTCAGCTTGCTCACCGGGACCGAGTAGGACTTGTTGCCGAGCTGGT
AGATGACCGTCCCGGTCTTG

Product: succinate-semialdehyde dehydrogenase

Products: NA

Alternate protein names: SSDH [H]

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MTPPAAARASDAASSLRDRLKDPSLLREQCYIDGAWVGTPEFAVNNPATGAELARIAQLGAAETTQAVEAAARAFPLWAK
QTAKQRSNILRKWFELIIANREDLALILTSEQGKPLAEALGEVDIGAAYIEFFAEEARRVYGETIPTQKPDARLLALKQP
IGVCGAITPWNFPNSMITRKVSPALAAGCTVVLKPANETPLSALALAVLAERAGIPKGALNIVTGDAPPIGKVLCEHPAV
RFVGFTGSTEVGKILYRQSAGTVKKLGLELGGNAPFVVFDDADVDAAVEGAIVSKYRNMGQTCVCANRLYAQDGIYDAFV
DKLAAKVAAMKIGEGTEAGVTQGPLINEDAVEKVERHIADAVKGGAKIVTGGKRHALGRTFFEPTVLRDVKADALVAHEE
TFGPLAPVIRFKDEADVIAMCNASPFGLASYFYARDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGSH
HGIEEYLEIKYVMMAGV

Sequences:

>Translated_497_residues
MTPPAAARASDAASSLRDRLKDPSLLREQCYIDGAWVGTPEFAVNNPATGAELARIAQLGAAETTQAVEAAARAFPLWAK
QTAKQRSNILRKWFELIIANREDLALILTSEQGKPLAEALGEVDIGAAYIEFFAEEARRVYGETIPTQKPDARLLALKQP
IGVCGAITPWNFPNSMITRKVSPALAAGCTVVLKPANETPLSALALAVLAERAGIPKGALNIVTGDAPPIGKVLCEHPAV
RFVGFTGSTEVGKILYRQSAGTVKKLGLELGGNAPFVVFDDADVDAAVEGAIVSKYRNMGQTCVCANRLYAQDGIYDAFV
DKLAAKVAAMKIGEGTEAGVTQGPLINEDAVEKVERHIADAVKGGAKIVTGGKRHALGRTFFEPTVLRDVKADALVAHEE
TFGPLAPVIRFKDEADVIAMCNASPFGLASYFYARDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGSH
HGIEEYLEIKYVMMAGV
>Mature_496_residues
TPPAAARASDAASSLRDRLKDPSLLREQCYIDGAWVGTPEFAVNNPATGAELARIAQLGAAETTQAVEAAARAFPLWAKQ
TAKQRSNILRKWFELIIANREDLALILTSEQGKPLAEALGEVDIGAAYIEFFAEEARRVYGETIPTQKPDARLLALKQPI
GVCGAITPWNFPNSMITRKVSPALAAGCTVVLKPANETPLSALALAVLAERAGIPKGALNIVTGDAPPIGKVLCEHPAVR
FVGFTGSTEVGKILYRQSAGTVKKLGLELGGNAPFVVFDDADVDAAVEGAIVSKYRNMGQTCVCANRLYAQDGIYDAFVD
KLAAKVAAMKIGEGTEAGVTQGPLINEDAVEKVERHIADAVKGGAKIVTGGKRHALGRTFFEPTVLRDVKADALVAHEET
FGPLAPVIRFKDEADVIAMCNASPFGLASYFYARDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGSHH
GIEEYLEIKYVMMAGV

Specific function: Catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate [H]

COG id: COG1012

COG function: function code C; NAD-dependent aldehyde dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4507229, Length=479, Percent_Identity=56.5762004175365, Blast_Score=521, Evalue=1e-148,
Organism=Homo sapiens, GI25777721, Length=492, Percent_Identity=54.8780487804878, Blast_Score=511, Evalue=1e-145,
Organism=Homo sapiens, GI25777730, Length=498, Percent_Identity=37.7510040160643, Blast_Score=318, Evalue=9e-87,
Organism=Homo sapiens, GI25777724, Length=478, Percent_Identity=37.2384937238494, Blast_Score=304, Evalue=1e-82,
Organism=Homo sapiens, GI21614513, Length=477, Percent_Identity=37.9454926624738, Blast_Score=303, Evalue=3e-82,
Organism=Homo sapiens, GI153266822, Length=473, Percent_Identity=36.5750528541226, Blast_Score=302, Evalue=4e-82,
Organism=Homo sapiens, GI25777732, Length=483, Percent_Identity=36.0248447204969, Blast_Score=301, Evalue=9e-82,
Organism=Homo sapiens, GI238814322, Length=478, Percent_Identity=35.7740585774059, Blast_Score=298, Evalue=8e-81,
Organism=Homo sapiens, GI21361176, Length=497, Percent_Identity=36.2173038229376, Blast_Score=298, Evalue=1e-80,
Organism=Homo sapiens, GI12007648, Length=480, Percent_Identity=34.1666666666667, Blast_Score=295, Evalue=5e-80,
Organism=Homo sapiens, GI25777728, Length=418, Percent_Identity=38.2775119617225, Blast_Score=276, Evalue=2e-74,
Organism=Homo sapiens, GI115387104, Length=453, Percent_Identity=34.6578366445916, Blast_Score=273, Evalue=3e-73,
Organism=Homo sapiens, GI25777726, Length=476, Percent_Identity=34.2436974789916, Blast_Score=256, Evalue=3e-68,
Organism=Homo sapiens, GI25952152, Length=473, Percent_Identity=31.5010570824524, Blast_Score=241, Evalue=1e-63,
Organism=Homo sapiens, GI188035924, Length=463, Percent_Identity=30.4535637149028, Blast_Score=209, Evalue=7e-54,
Organism=Homo sapiens, GI310128093, Length=476, Percent_Identity=30.672268907563, Blast_Score=208, Evalue=8e-54,
Organism=Homo sapiens, GI310128103, Length=477, Percent_Identity=30.398322851153, Blast_Score=208, Evalue=9e-54,
Organism=Homo sapiens, GI301500698, Length=481, Percent_Identity=29.7297297297297, Blast_Score=206, Evalue=3e-53,
Organism=Homo sapiens, GI11095441, Length=457, Percent_Identity=28.2275711159737, Blast_Score=203, Evalue=2e-52,
Organism=Homo sapiens, GI310128091, Length=476, Percent_Identity=29.8319327731092, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI223972651, Length=464, Percent_Identity=29.5258620689655, Blast_Score=161, Evalue=2e-39,
Organism=Homo sapiens, GI310128089, Length=329, Percent_Identity=31.0030395136778, Blast_Score=150, Evalue=4e-36,
Organism=Homo sapiens, GI310128097, Length=250, Percent_Identity=34.4, Blast_Score=140, Evalue=2e-33,
Organism=Homo sapiens, GI206597441, Length=348, Percent_Identity=30.4597701149425, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI206597439, Length=348, Percent_Identity=30.4597701149425, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI22907049, Length=348, Percent_Identity=30.4597701149425, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI73695881, Length=354, Percent_Identity=29.9435028248588, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI73695879, Length=354, Percent_Identity=29.9435028248588, Blast_Score=133, Evalue=5e-31,
Organism=Homo sapiens, GI4502043, Length=329, Percent_Identity=30.3951367781155, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI238814371, Length=329, Percent_Identity=30.3951367781155, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI71773324, Length=329, Percent_Identity=30.3951367781155, Blast_Score=129, Evalue=5e-30,
Organism=Homo sapiens, GI310128095, Length=309, Percent_Identity=30.7443365695793, Blast_Score=129, Evalue=8e-30,
Organism=Homo sapiens, GI73466520, Length=332, Percent_Identity=28.3132530120482, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI4557303, Length=332, Percent_Identity=28.3132530120482, Blast_Score=125, Evalue=7e-29,
Organism=Homo sapiens, GI238859541, Length=469, Percent_Identity=25.1599147121535, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI25777736, Length=470, Percent_Identity=25.3191489361702, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI25777734, Length=470, Percent_Identity=25.3191489361702, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI310128087, Length=282, Percent_Identity=29.0780141843972, Blast_Score=112, Evalue=9e-25,
Organism=Homo sapiens, GI223972653, Length=466, Percent_Identity=25.5364806866953, Blast_Score=103, Evalue=3e-22,
Organism=Homo sapiens, GI310128099, Length=226, Percent_Identity=28.3185840707965, Blast_Score=85, Evalue=1e-16,
Organism=Homo sapiens, GI310128101, Length=226, Percent_Identity=28.3185840707965, Blast_Score=85, Evalue=1e-16,
Organism=Escherichia coli, GI1789015, Length=479, Percent_Identity=60.5427974947808, Blast_Score=605, Evalue=1e-174,
Organism=Escherichia coli, GI1787684, Length=473, Percent_Identity=37.6321353065539, Blast_Score=317, Evalue=1e-87,
Organism=Escherichia coli, GI1787715, Length=453, Percent_Identity=38.6313465783664, Blast_Score=286, Evalue=3e-78,
Organism=Escherichia coli, GI1787558, Length=478, Percent_Identity=34.1004184100418, Blast_Score=264, Evalue=1e-71,
Organism=Escherichia coli, GI87081896, Length=459, Percent_Identity=33.5511982570806, Blast_Score=260, Evalue=1e-70,
Organism=Escherichia coli, GI1786504, Length=480, Percent_Identity=32.5, Blast_Score=243, Evalue=1e-65,
Organism=Escherichia coli, GI87081926, Length=447, Percent_Identity=31.9910514541387, Blast_Score=231, Evalue=6e-62,
Organism=Escherichia coli, GI87082295, Length=486, Percent_Identity=31.6872427983539, Blast_Score=225, Evalue=5e-60,
Organism=Escherichia coli, GI1788042, Length=452, Percent_Identity=32.0796460176991, Blast_Score=186, Evalue=3e-48,
Organism=Escherichia coli, GI1787250, Length=430, Percent_Identity=29.3023255813954, Blast_Score=160, Evalue=2e-40,
Organism=Escherichia coli, GI1787653, Length=395, Percent_Identity=23.0379746835443, Blast_Score=79, Evalue=8e-16,
Organism=Caenorhabditis elegans, GI17534119, Length=466, Percent_Identity=48.2832618025751, Blast_Score=426, Evalue=1e-119,
Organism=Caenorhabditis elegans, GI133930964, Length=476, Percent_Identity=38.655462184874, Blast_Score=311, Evalue=5e-85,
Organism=Caenorhabditis elegans, GI17562198, Length=474, Percent_Identity=37.9746835443038, Blast_Score=301, Evalue=7e-82,
Organism=Caenorhabditis elegans, GI25144435, Length=458, Percent_Identity=37.3362445414847, Blast_Score=299, Evalue=3e-81,
Organism=Caenorhabditis elegans, GI32564736, Length=414, Percent_Identity=37.6811594202899, Blast_Score=278, Evalue=5e-75,
Organism=Caenorhabditis elegans, GI25143876, Length=461, Percent_Identity=34.2733188720174, Blast_Score=251, Evalue=5e-67,
Organism=Caenorhabditis elegans, GI25143874, Length=461, Percent_Identity=34.2733188720174, Blast_Score=251, Evalue=6e-67,
Organism=Caenorhabditis elegans, GI17551164, Length=455, Percent_Identity=33.6263736263736, Blast_Score=241, Evalue=8e-64,
Organism=Caenorhabditis elegans, GI71995606, Length=465, Percent_Identity=33.7634408602151, Blast_Score=237, Evalue=9e-63,
Organism=Caenorhabditis elegans, GI115534176, Length=450, Percent_Identity=31.1111111111111, Blast_Score=213, Evalue=2e-55,
Organism=Caenorhabditis elegans, GI71995613, Length=405, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=9e-53,
Organism=Caenorhabditis elegans, GI71986308, Length=475, Percent_Identity=28.6315789473684, Blast_Score=178, Evalue=5e-45,
Organism=Caenorhabditis elegans, GI32566756, Length=447, Percent_Identity=29.082774049217, Blast_Score=151, Evalue=6e-37,
Organism=Caenorhabditis elegans, GI25146391, Length=447, Percent_Identity=29.082774049217, Blast_Score=151, Evalue=7e-37,
Organism=Caenorhabditis elegans, GI17564084, Length=444, Percent_Identity=30.1801801801802, Blast_Score=151, Evalue=8e-37,
Organism=Caenorhabditis elegans, GI25146394, Length=447, Percent_Identity=29.082774049217, Blast_Score=151, Evalue=9e-37,
Organism=Caenorhabditis elegans, GI17534447, Length=456, Percent_Identity=28.9473684210526, Blast_Score=146, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI115532534, Length=394, Percent_Identity=30.2030456852792, Blast_Score=137, Evalue=1e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=410, Percent_Identity=28.780487804878, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71990744, Length=298, Percent_Identity=28.5234899328859, Blast_Score=99, Evalue=7e-21,
Organism=Saccharomyces cerevisiae, GI6319478, Length=486, Percent_Identity=49.3827160493827, Blast_Score=491, Evalue=1e-139,
Organism=Saccharomyces cerevisiae, GI6320917, Length=469, Percent_Identity=36.8869936034115, Blast_Score=306, Evalue=5e-84,
Organism=Saccharomyces cerevisiae, GI6324950, Length=467, Percent_Identity=36.1884368308351, Blast_Score=302, Evalue=6e-83,
Organism=Saccharomyces cerevisiae, GI6325196, Length=455, Percent_Identity=36.7032967032967, Blast_Score=277, Evalue=2e-75,
Organism=Saccharomyces cerevisiae, GI6323821, Length=466, Percent_Identity=33.4763948497854, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6323822, Length=466, Percent_Identity=32.8326180257511, Blast_Score=238, Evalue=2e-63,
Organism=Saccharomyces cerevisiae, GI6321828, Length=466, Percent_Identity=25.1072961373391, Blast_Score=162, Evalue=1e-40,
Organism=Saccharomyces cerevisiae, GI6321826, Length=467, Percent_Identity=27.8372591006424, Blast_Score=111, Evalue=2e-25,
Organism=Saccharomyces cerevisiae, GI6323757, Length=317, Percent_Identity=26.1829652996845, Blast_Score=91, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281362580, Length=482, Percent_Identity=50.8298755186722, Blast_Score=501, Evalue=1e-142,
Organism=Drosophila melanogaster, GI62472918, Length=482, Percent_Identity=50.8298755186722, Blast_Score=501, Evalue=1e-142,
Organism=Drosophila melanogaster, GI62472926, Length=482, Percent_Identity=50.8298755186722, Blast_Score=501, Evalue=1e-142,
Organism=Drosophila melanogaster, GI62472936, Length=482, Percent_Identity=50.8298755186722, Blast_Score=501, Evalue=1e-142,
Organism=Drosophila melanogaster, GI21356737, Length=482, Percent_Identity=50.8298755186722, Blast_Score=501, Evalue=1e-142,
Organism=Drosophila melanogaster, GI24650465, Length=457, Percent_Identity=40.0437636761488, Blast_Score=330, Evalue=1e-90,
Organism=Drosophila melanogaster, GI20129399, Length=491, Percent_Identity=37.8818737270876, Blast_Score=306, Evalue=2e-83,
Organism=Drosophila melanogaster, GI24585660, Length=476, Percent_Identity=35.2941176470588, Blast_Score=287, Evalue=1e-77,
Organism=Drosophila melanogaster, GI24666674, Length=483, Percent_Identity=28.9855072463768, Blast_Score=186, Evalue=2e-47,
Organism=Drosophila melanogaster, GI24638878, Length=479, Percent_Identity=27.7661795407098, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI24638876, Length=479, Percent_Identity=27.7661795407098, Blast_Score=182, Evalue=4e-46,
Organism=Drosophila melanogaster, GI281360303, Length=423, Percent_Identity=26.9503546099291, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI45552499, Length=423, Percent_Identity=26.9503546099291, Blast_Score=130, Evalue=2e-30,
Organism=Drosophila melanogaster, GI281360301, Length=423, Percent_Identity=26.9503546099291, Blast_Score=129, Evalue=4e-30,
Organism=Drosophila melanogaster, GI281360299, Length=423, Percent_Identity=26.9503546099291, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI281360297, Length=423, Percent_Identity=26.9503546099291, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI281360295, Length=423, Percent_Identity=26.9503546099291, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24586250, Length=423, Percent_Identity=26.9503546099291, Blast_Score=129, Evalue=6e-30,
Organism=Drosophila melanogaster, GI24668425, Length=443, Percent_Identity=24.8306997742664, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24668417, Length=443, Percent_Identity=24.8306997742664, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI24668413, Length=443, Percent_Identity=24.8306997742664, Blast_Score=115, Evalue=6e-26,
Organism=Drosophila melanogaster, GI28571806, Length=461, Percent_Identity=24.0780911062907, Blast_Score=89, Evalue=7e-18,
Organism=Drosophila melanogaster, GI28571802, Length=461, Percent_Identity=24.0780911062907, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI28571800, Length=461, Percent_Identity=24.0780911062907, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI28571798, Length=461, Percent_Identity=24.0780911062907, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI28571796, Length=461, Percent_Identity=24.0780911062907, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI28571794, Length=461, Percent_Identity=24.0780911062907, Blast_Score=89, Evalue=8e-18,
Organism=Drosophila melanogaster, GI281360293, Length=235, Percent_Identity=27.2340425531915, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590
- InterPro:   IPR010102 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.79 [H]

Molecular weight: Translated: 52772; Mature: 52641

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPPAAARASDAASSLRDRLKDPSLLREQCYIDGAWVGTPEFAVNNPATGAELARIAQLG
CCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHC
AAETTQAVEAAARAFPLWAKQTAKQRSNILRKWFELIIANREDLALILTSEQGKPLAEAL
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH
GEVDIGAAYIEFFAEEARRVYGETIPTQKPDARLLALKQPIGVCGAITPWNFPNSMITRK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
VSPALAAGCTVVLKPANETPLSALALAVLAERAGIPKGALNIVTGDAPPIGKVLCEHPAV
CCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCCE
RFVGFTGSTEVGKILYRQSAGTVKKLGLELGGNAPFVVFDDADVDAAVEGAIVSKYRNMG
EEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
QTCVCANRLYAQDGIYDAFVDKLAAKVAAMKIGEGTEAGVTQGPLINEDAVEKVERHIAD
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AVKGGAKIVTGGKRHALGRTFFEPTVLRDVKADALVAHEETFGPLAPVIRFKDEADVIAM
HHCCCCEEEECCCHHHCCHHHCCCHHHHHCCHHHHEECHHCCCCHHHHHEECCCCCEEEE
CNASPFGLASYFYARDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGSH
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCC
HGIEEYLEIKYVMMAGV
CCHHHHHHHHHHEECCC
>Mature Secondary Structure 
TPPAAARASDAASSLRDRLKDPSLLREQCYIDGAWVGTPEFAVNNPATGAELARIAQLG
CCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHC
AAETTQAVEAAARAFPLWAKQTAKQRSNILRKWFELIIANREDLALILTSEQGKPLAEAL
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH
GEVDIGAAYIEFFAEEARRVYGETIPTQKPDARLLALKQPIGVCGAITPWNFPNSMITRK
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHHHH
VSPALAAGCTVVLKPANETPLSALALAVLAERAGIPKGALNIVTGDAPPIGKVLCEHPAV
CCHHHHCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCCCHHHHHHCCCCE
RFVGFTGSTEVGKILYRQSAGTVKKLGLELGGNAPFVVFDDADVDAAVEGAIVSKYRNMG
EEEECCCCCHHHHHHHHCCCCHHHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHHHCCC
QTCVCANRLYAQDGIYDAFVDKLAAKVAAMKIGEGTEAGVTQGPLINEDAVEKVERHIAD
CHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
AVKGGAKIVTGGKRHALGRTFFEPTVLRDVKADALVAHEETFGPLAPVIRFKDEADVIAM
HHCCCCEEEECCCHHHCCHHHCCCHHHHHCCHHHHEECHHCCCCHHHHHEECCCCCEEEE
CNASPFGLASYFYARDLGRVWRVAEALESGMVGVNTGLITTEVAPFGGVKESGLGREGSH
ECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCEEEEECCCCCCCCCCCCCCCCCC
HGIEEYLEIKYVMMAGV
CCHHHHHHHHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8297211; 9205837; 9278503 [H]