Definition | Metallosphaera sedula DSM 5348 chromosome, complete genome. |
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Accession | NC_009440 |
Length | 2,191,517 |
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Identifier: 146304485
GI number:
Start: 1661163
End: 1662392
Strand: Direct
Name: Not Available
Synonym: Msed_1722
Alternate gene names: NA
Gene position: NA
Preceding gene: 146304480
Following gene: 146304486
Centisome position: NA
GC content: NA
Gene sequence:
>1230_bases ATGAAAATTTATTTGGCTGAGCACACAATAGGGTCCTTTGCCTTTGATGAGTCAGGGAACCTTTTGGATTACGTCCTTAA TCCAAAGGAACTGGGCAAGGTAGTTGATATTCTAATAAACGCCGAGAAAGGTGAACCAATGCCCTCTACCATGGAATTAA TTCAGAAACTGAAACCGTCGGAAGTAGTTGTGGAAAGCGAAACGGAGAGCTCAAGGATGCAGACCTTAGGGATCAAGGTT GTATCCAAGCCCCATCATGTGGGAGCCAGGGCTTTGAGGGGTTCTCTCGCTGAACTAGCAGTAAAAACAAAATTCGCTGA AAATCCGAGCGAAGTGTACAATTTCCTTTATCAAGTATCTCTAGAATATACGAGAAGAAAGCTGAGAAAGGCCGCCCAGA AAAGGGACCTTCTCGCCATACAGGCCATAAGGGCTATCGACGATATTGATAAGACCATTAACCTTTTCTCCGAAAGATTA AGGGAGTGGTATAGTATACACTTCCCCGAAGCCGATAAACTGGTTGAGGACCATGAACAATACGCCAAAATAGTTTCCCT GGCTGGTTATAGGGATAATGTAACGGTGGAGACGTTAACCGAGATAGGACTTAATGAGCAAAGGGCTAAGAAGCTAGCCG ATGCTGCCAAGAAGAGTATAGGAGCAGACATCTCAGATGCGGATATCAACTCCATCAGGGATCTGGCTAACACGATTTTG TCTCTTTTCAAGCTAAGGAACTCGCTTTACGACTACTTGGACTCAATTATGAGGGAAGTAGCTCCCAACGTGACTGAACT AGTGGGTCCCACCCTTGGTGCTAGGCTGTTAAGTCTGGCAGGGAGCCTTGAGGAACTTTCTAAGATGCCAGCTAGTACGA TTCAAGTGTTAGGGGCTGAGAAAGCCCTCTTTAGGGCACTTAAGAGCGGAAGCAGACCACCCAAACATGGAATCATTTTC CAGTATCCAGCAATTCACGTCTCTCCCAGATGGCAGAGAGGGAAGATTGCCAGGGCCCTAGCTGCCAAGCTAGCAATAGC ATCAAGGATAGACGCCTATAGCGGAAGATTTGTGGGAACACAGCTTGTGGAACAGGTGAATAAGAGAATCGAGGAGATAA AAACGAAATATGCCCAGCCACCACCCAAAAAACAACAACCAGCTAAGGAAGAGGGGAAGAGATTTGATAAAAGAGAGCAT AAAAAGGGGAAAAAGGGAAAGAGAAGGTAG
Upstream 100 bases:
>100_bases GCCTTTGTTAACGAACCGTGAGATGGCATTTGCTATCATGTATATGTGGTAAAACAAGACATTTAAACTTAGAGCTTTAC CTAGATTCGGGCTTTACTCA
Downstream 100 bases:
>100_bases GTTGAGTGAGAATGTCAGAACTTCTGGATACAGTTAGAAAAACCGAGATGGAGAACGTCTACGAGTGCGTTTATGTCGAC GGTACAGTGAGGCTCTGTAC
Product: C/D box methylation guide ribonucleoprotein complex aNOP56 subunit
Products: NA
Alternate protein names: NA
Number of amino acids: NA
Protein sequence:
>409_residues MKIYLAEHTIGSFAFDESGNLLDYVLNPKELGKVVDILINAEKGEPMPSTMELIQKLKPSEVVVESETESSRMQTLGIKV VSKPHHVGARALRGSLAELAVKTKFAENPSEVYNFLYQVSLEYTRRKLRKAAQKRDLLAIQAIRAIDDIDKTINLFSERL REWYSIHFPEADKLVEDHEQYAKIVSLAGYRDNVTVETLTEIGLNEQRAKKLADAAKKSIGADISDADINSIRDLANTIL SLFKLRNSLYDYLDSIMREVAPNVTELVGPTLGARLLSLAGSLEELSKMPASTIQVLGAEKALFRALKSGSRPPKHGIIF QYPAIHVSPRWQRGKIARALAAKLAIASRIDAYSGRFVGTQLVEQVNKRIEEIKTKYAQPPPKKQQPAKEEGKRFDKREH KKGKKGKRR
Sequences:
NA
Specific function: NA
COG id: COG1498
COG function: function code J; Protein implicated in ribosomal biogenesis, Nop56p homolog
Gene ontology:
Cell location: NA
Metaboloic importance: NA
Operon status: NA
Operon components: NA
Similarity: NA
Homologues:
NA
Paralogues:
NA
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: NA
Theoretical pI: NA
Prosite motif: NA
Important sites: NA
Signals:
NA
Transmembrane regions:
NA
Cys/Met content:
NA
Secondary structure: NA
PDB accession: NA
Resolution: NA
Structure class: NA
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: NA
TargetDB status: NA
Availability: NA
References: NA