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The map label for this gene is 146301746

Identifier: 146301746

GI number: 146301746

Start: 4790561

End: 4792240

Strand: Direct

Name: 146301746

Synonym: Fjoh_4008

Alternate gene names: NA

Gene position: 4790561-4792240 (Clockwise)

Preceding gene: 146301738

Following gene: 146301747

Centisome position: 78.57

GC content: 39.05

Gene sequence:

>1680_bases
GTGCAGGAAAAAACAAAATCACATCATTTTATATTCCCAAAGACTCCTACGGGCGTTGACGGACTAGACGAGATTACAGA
AGGTGGTTTCCCAAAAGGGCGCCCTACTTTAATCTGCGGTGGTGCCGGCTGTGGAAAAACACTAATGTCAATGCAGTTCC
TTATTAAAGGAATTACAGATCATAATGAAAACGGAGTTTTCATGTCCTTTGAAGAACCTTCAGATGATCTTACTTTAAAT
GTAAAATCTCTTGGTTTTGACCTTGAGCAGCTTAAAAAAGATAAAAAGCTTGTAGTAGATCATGTTCGCGTAGAAAGATC
AGAAATTGAAGAAGCGGGAGAATACGATCTTGACGGCTTATTTATACGATTAGGTCATGCGATCGATTCTATAAAAGCAA
CCCGTGTTGTTCTGGATACCATCGAATCTTTATTTGCAGGTCTTGACAATCAGGCAATACTGAGAGCCGAATTACGAAGA
TTATTTCATTGGCTTAAAACAAAAGGCGTTACAGCGGTTATTACAGGCGAACGCGGCGAAGCAACCTTAACCCGTCAGGG
ATTAGAAGAATACGTTTCTGACTGTGTTATTGTTCTCGATCATCGTGTTATAGAGCAGGTTTCGACCAGAAGACTCCGCA
TTGTAAAATACAGAGGTTCTACACACGGAACAAACGAATATCCGTTTTTAATTGATGAAGAAGGTATTTCGGTACTTCCT
ATTACATCATTAAAACTCGATAACGAAGTTTCATCTGATATTATTTCTACAGGAGTTCCCGGATTAAACGAAATGTTTAA
CAGCGGCGGATTCTATCGCGGAAGCAACATTTTAATATCTGGAACTGCCGGAACAGCAAAAACTACCGTTGCCTGCTATT
TTGCCAACGAACAATGCGAAAAGAACGAAAAAACGATTTATTTCGCTTTCGAAGAATCACCGCATCAATTGGTTCGCAAC
ATGAAATCAATTGGTATTGATCTCGATAAACACATCAAAAAAGGCATTTTGCAAATACACTCTTCACGTCCGTCGTTAAA
CGGTCTTGAACTGCATTTGCTTACCCTTCGCAAAATGATAAAAGAATTTGCACCAACCACTATTATTATTGATCCTATTA
GTAACCTTATTTCGGTAGGAAGCGAACACGAAGTTCGTTCTATGCTCGTAAGGTTGATTGATATGCTAAAAGCCAATAAT
ATTACGGCGATGTTTACGTCTTTAAACAAACAAACGGACAATTTCAGACCAGATTTGGCCGAAGAATCTGTATCGTCACT
AGTCGATACCTGGATTACCGTTCGTGATATGGAAGGCGTTGGCGAAAGAAACCGCGGCATTTTTATTATCAAAGCCAGAG
GAATGGGACATTCTAACCAGGTCAGAGAATTTGTGATCACTAATAAAGGAATTGAATTATTGGATGTAGAATTAGGTCCA
CAGGGAATCCTAACCGGAGCAGCCAGAAAATCACATCAGTTTAAGAAAACCATTTCTGATATTAAGCTGCAAAATGAAAT
CAGCCGAAAAGACAGAGAGATTGAACGCAAACGCAAAGTTCTTGAAGCCAATATTGAAGCGTTGAGAACCGAATTTGAAT
CGGCAGAAGAAGAACTGAGTATCCTTAAAGCAACAGAAGAATTGCAGGAAAAACTGTCTTCTAAGAAAAAAGAAAATTAA

Upstream 100 bases:

>100_bases
ACTTTTAAAACTTCATTAAACAGCTGTTAAATCTTAGTCAGAATTCATTGTAAATACTGTAAGAAAACGTATATTTGAGA
TAATACTGAATTTTATTATC

Downstream 100 bases:

>100_bases
AATGAAAAAAGAAGTAGCCGAATGGCAATTATTGCTCTATATAGCAGGCCAAACGCCAAAATCGATCAAGGCGCTTGAAA
ACATAAAAAAGTACGCCGAA

Product: circadian clock protein KaiC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 559; Mature: 559

Protein sequence:

>559_residues
MQEKTKSHHFIFPKTPTGVDGLDEITEGGFPKGRPTLICGGAGCGKTLMSMQFLIKGITDHNENGVFMSFEEPSDDLTLN
VKSLGFDLEQLKKDKKLVVDHVRVERSEIEEAGEYDLDGLFIRLGHAIDSIKATRVVLDTIESLFAGLDNQAILRAELRR
LFHWLKTKGVTAVITGERGEATLTRQGLEEYVSDCVIVLDHRVIEQVSTRRLRIVKYRGSTHGTNEYPFLIDEEGISVLP
ITSLKLDNEVSSDIISTGVPGLNEMFNSGGFYRGSNILISGTAGTAKTTVACYFANEQCEKNEKTIYFAFEESPHQLVRN
MKSIGIDLDKHIKKGILQIHSSRPSLNGLELHLLTLRKMIKEFAPTTIIIDPISNLISVGSEHEVRSMLVRLIDMLKANN
ITAMFTSLNKQTDNFRPDLAEESVSSLVDTWITVRDMEGVGERNRGIFIIKARGMGHSNQVREFVITNKGIELLDVELGP
QGILTGAARKSHQFKKTISDIKLQNEISRKDREIERKRKVLEANIEALRTEFESAEEELSILKATEELQEKLSSKKKEN

Sequences:

>Translated_559_residues
MQEKTKSHHFIFPKTPTGVDGLDEITEGGFPKGRPTLICGGAGCGKTLMSMQFLIKGITDHNENGVFMSFEEPSDDLTLN
VKSLGFDLEQLKKDKKLVVDHVRVERSEIEEAGEYDLDGLFIRLGHAIDSIKATRVVLDTIESLFAGLDNQAILRAELRR
LFHWLKTKGVTAVITGERGEATLTRQGLEEYVSDCVIVLDHRVIEQVSTRRLRIVKYRGSTHGTNEYPFLIDEEGISVLP
ITSLKLDNEVSSDIISTGVPGLNEMFNSGGFYRGSNILISGTAGTAKTTVACYFANEQCEKNEKTIYFAFEESPHQLVRN
MKSIGIDLDKHIKKGILQIHSSRPSLNGLELHLLTLRKMIKEFAPTTIIIDPISNLISVGSEHEVRSMLVRLIDMLKANN
ITAMFTSLNKQTDNFRPDLAEESVSSLVDTWITVRDMEGVGERNRGIFIIKARGMGHSNQVREFVITNKGIELLDVELGP
QGILTGAARKSHQFKKTISDIKLQNEISRKDREIERKRKVLEANIEALRTEFESAEEELSILKATEELQEKLSSKKKEN
>Mature_559_residues
MQEKTKSHHFIFPKTPTGVDGLDEITEGGFPKGRPTLICGGAGCGKTLMSMQFLIKGITDHNENGVFMSFEEPSDDLTLN
VKSLGFDLEQLKKDKKLVVDHVRVERSEIEEAGEYDLDGLFIRLGHAIDSIKATRVVLDTIESLFAGLDNQAILRAELRR
LFHWLKTKGVTAVITGERGEATLTRQGLEEYVSDCVIVLDHRVIEQVSTRRLRIVKYRGSTHGTNEYPFLIDEEGISVLP
ITSLKLDNEVSSDIISTGVPGLNEMFNSGGFYRGSNILISGTAGTAKTTVACYFANEQCEKNEKTIYFAFEESPHQLVRN
MKSIGIDLDKHIKKGILQIHSSRPSLNGLELHLLTLRKMIKEFAPTTIIIDPISNLISVGSEHEVRSMLVRLIDMLKANN
ITAMFTSLNKQTDNFRPDLAEESVSSLVDTWITVRDMEGVGERNRGIFIIKARGMGHSNQVREFVITNKGIELLDVELGP
QGILTGAARKSHQFKKTISDIKLQNEISRKDREIERKRKVLEANIEALRTEFESAEEELSILKATEELQEKLSSKKKEN

Specific function: Unknown

COG id: COG0467

COG function: function code T; RecA-superfamily ATPases implicated in signal transduction

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 kaiC domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003593
- InterPro:   IPR014774
- InterPro:   IPR010624 [H]

Pfam domain/function: PF06745 KaiC [H]

EC number: NA

Molecular weight: Translated: 62627; Mature: 62627

Theoretical pI: Translated: 6.37; Mature: 6.37

Prosite motif: PS51146 KAIC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKTKSHHFIFPKTPTGVDGLDEITEGGFPKGRPTLICGGAGCGKTLMSMQFLIKGITD
CCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC
HNENGVFMSFEEPSDDLTLNVKSLGFDLEQLKKDKKLVVDHVRVERSEIEEAGEYDLDGL
CCCCCEEEEECCCCCCEEEEHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHH
FIRLGHAIDSIKATRVVLDTIESLFAGLDNQAILRAELRRLFHWLKTKGVTAVITGERGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCC
ATLTRQGLEEYVSDCVIVLDHRVIEQVSTRRLRIVKYRGSTHGTNEYPFLIDEEGISVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEECCCCCEEEE
ITSLKLDNEVSSDIISTGVPGLNEMFNSGGFYRGSNILISGTAGTAKTTVACYFANEQCE
EECEECCCHHHHHHHHCCCCCHHHHHCCCCEEECCCEEEECCCCCCCEEEEEEEECCCCC
KNEKTIYFAFEESPHQLVRNMKSIGIDLDKHIKKGILQIHSSRPSLNGLELHLLTLRKMI
CCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KEFAPTTIIIDPISNLISVGSEHEVRSMLVRLIDMLKANNITAMFTSLNKQTDNFRPDLA
HHHCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCHH
EESVSSLVDTWITVRDMEGVGERNRGIFIIKARGMGHSNQVREFVITNKGIELLDVELGP
HHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCHHHHHEEEECCCCEEEEEEECC
QGILTGAARKSHQFKKTISDIKLQNEISRKDREIERKRKVLEANIEALRTEFESAEEELS
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKATEELQEKLSSKKKEN
HHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MQEKTKSHHFIFPKTPTGVDGLDEITEGGFPKGRPTLICGGAGCGKTLMSMQFLIKGITD
CCCCCCCCCEECCCCCCCCCCHHHHHCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHCC
HNENGVFMSFEEPSDDLTLNVKSLGFDLEQLKKDKKLVVDHVRVERSEIEEAGEYDLDGL
CCCCCEEEEECCCCCCEEEEHHHHCCCHHHHHCHHHHHHHHHHHHHHHHHHCCCCCCCHH
FIRLGHAIDSIKATRVVLDTIESLFAGLDNQAILRAELRRLFHWLKTKGVTAVITGERGE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCEEEEEECCCCC
ATLTRQGLEEYVSDCVIVLDHRVIEQVSTRRLRIVKYRGSTHGTNEYPFLIDEEGISVLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEEECCCCCCCCCCEEECCCCCEEEE
ITSLKLDNEVSSDIISTGVPGLNEMFNSGGFYRGSNILISGTAGTAKTTVACYFANEQCE
EECEECCCHHHHHHHHCCCCCHHHHHCCCCEEECCCEEEECCCCCCCEEEEEEEECCCCC
KNEKTIYFAFEESPHQLVRNMKSIGIDLDKHIKKGILQIHSSRPSLNGLELHLLTLRKMI
CCCCEEEEEECCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
KEFAPTTIIIDPISNLISVGSEHEVRSMLVRLIDMLKANNITAMFTSLNKQTDNFRPDLA
HHHCCCEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCCCCHH
EESVSSLVDTWITVRDMEGVGERNRGIFIIKARGMGHSNQVREFVITNKGIELLDVELGP
HHHHHHHHHHHHHEEECCCCCCCCCCEEEEEECCCCCCHHHHHEEEECCCCEEEEEEECC
QGILTGAARKSHQFKKTISDIKLQNEISRKDREIERKRKVLEANIEALRTEFESAEEELS
CCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILKATEELQEKLSSKKKEN
HHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]