Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301718

Identifier: 146301718

GI number: 146301718

Start: 4765032

End: 4765550

Strand: Direct

Name: 146301718

Synonym: Fjoh_3980

Alternate gene names: NA

Gene position: 4765032-4765550 (Clockwise)

Preceding gene: 146301717

Following gene: 146301719

Centisome position: 78.16

GC content: 35.65

Gene sequence:

>519_bases
ATGAACATTCGTGAAAAATATAATATAACAGAATCTGCCCATTCTTTTTCATTCCAGCCTGTTAAACCACTGCAAAAAAT
ATCGCAGTGGTTTTTGGCTGGTATTATCGCTGCGGCAATTGTACTTCCTTTTTTTGAAGAGAAACTGGGCGAAGTATGGT
TTTATTCCCTTTACGTTTTATTAGCTTATGGCGTACTGCATAGTTTGTATGATATTTACATAAGGGCCCGGATTCGCTAT
ACTTTTGACAGCAGAAATAATGCGGTTTACAAAATGACACCATTATTTCCTGATAAAAAAATCATGAAATTAGAAGAAGC
TGTTATCTTTGTAAGTTCCGAAATGGGAAGCTGGCACTATAGTTTAGGCGCCAGAAAAAGCCATTTTATTAAAAACTATT
TCATCAGCGAAAACTTCAGCTCAGGCAGAAAAAGCGATCAAAAACAAGTCGAATATGAAAAACATATTCTGGCAAAATTA
AACCAGCTGACAGCATCTGTTCAACCTGTACAATCTTAA

Upstream 100 bases:

>100_bases
TTAAAAGATGGAAAAGAAAAATGTGTCATGATTGCACAAGCTTTTACCAGCAGAAAAATTCAAAATCTGGCCAATGAAAT
TGATGAAATACTGAACAGCA

Downstream 100 bases:

>100_bases
TTATTTTATATATGAAAATCCAGAAAATCTTCGCCTTAGTATTTGTATCAACCTTATTGTTTTCATGTAATTTTTTTACA
GACAGTTCTCCAAACAGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNIREKYNITESAHSFSFQPVKPLQKISQWFLAGIIAAAIVLPFFEEKLGEVWFYSLYVLLAYGVLHSLYDIYIRARIRY
TFDSRNNAVYKMTPLFPDKKIMKLEEAVIFVSSEMGSWHYSLGARKSHFIKNYFISENFSSGRKSDQKQVEYEKHILAKL
NQLTASVQPVQS

Sequences:

>Translated_172_residues
MNIREKYNITESAHSFSFQPVKPLQKISQWFLAGIIAAAIVLPFFEEKLGEVWFYSLYVLLAYGVLHSLYDIYIRARIRY
TFDSRNNAVYKMTPLFPDKKIMKLEEAVIFVSSEMGSWHYSLGARKSHFIKNYFISENFSSGRKSDQKQVEYEKHILAKL
NQLTASVQPVQS
>Mature_172_residues
MNIREKYNITESAHSFSFQPVKPLQKISQWFLAGIIAAAIVLPFFEEKLGEVWFYSLYVLLAYGVLHSLYDIYIRARIRY
TFDSRNNAVYKMTPLFPDKKIMKLEEAVIFVSSEMGSWHYSLGARKSHFIKNYFISENFSSGRKSDQKQVEYEKHILAKL
NQLTASVQPVQS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20062; Mature: 20062

Theoretical pI: Translated: 9.81; Mature: 9.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIREKYNITESAHSFSFQPVKPLQKISQWFLAGIIAAAIVLPFFEEKLGEVWFYSLYVL
CCCCHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYGVLHSLYDIYIRARIRYTFDSRNNAVYKMTPLFPDKKIMKLEEAVIFVSSEMGSWHY
HHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHEEECCCCCEEE
SLGARKSHFIKNYFISENFSSGRKSDQKQVEYEKHILAKLNQLTASVQPVQS
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNIREKYNITESAHSFSFQPVKPLQKISQWFLAGIIAAAIVLPFFEEKLGEVWFYSLYVL
CCCCHHCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LAYGVLHSLYDIYIRARIRYTFDSRNNAVYKMTPLFPDKKIMKLEEAVIFVSSEMGSWHY
HHHHHHHHHHHHHHHHHEEEEEECCCCEEEEECCCCCCHHHHHHHHHHHEEECCCCCEEE
SLGARKSHFIKNYFISENFSSGRKSDQKQVEYEKHILAKLNQLTASVQPVQS
CCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA