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The map label for this gene is hoxM [H]

Identifier: 146301648

GI number: 146301648

Start: 4655546

End: 4656052

Strand: Direct

Name: hoxM [H]

Synonym: Fjoh_3909

Alternate gene names: 146301648

Gene position: 4655546-4656052 (Clockwise)

Preceding gene: 146301647

Following gene: 146301649

Centisome position: 76.36

GC content: 37.08

Gene sequence:

>507_bases
ATGGAAACAGCAGTCAGCATTAGAAAAATAGACGAATTCCATTCTGATGGAAATACCATTTTGGTACTCGGAATAGGAAA
TTATTTGATGGGAGACGAAGGTGTTGGAGTGCATTTTATAAACCGAATTGATAAAGCCCAATTTCCGGAAGGCATATCTT
TTATCGATGGCGGAACTGGCGGTTTTACGTTAATTCCTTACATAGAAAGTCACCAAAAAGTAATAATTGTAGATGCTACA
ATGGATGGCAAGGAAGAAGGAACTATTTCGCTTTTGAAACCGCGTTTCTCAGAAGACTTCCCTATTTCACTGAGCGGACA
CAATTTTGGACTTAAAGATATGGTCGAAATCCTGTCTATAACAGATACCATGCCCGAAATCTATTTGTACACCATTACCA
TTTTAAAAATGGATCCCATGTGCATGCAGCTTTCACCTAAAGTAGAAGCTGCGATAGAAAAAGTAACGGCTGAAATTATA
CAGCAGATAGAAAAAATAAAAATTTAA

Upstream 100 bases:

>100_bases
TTTGTTCGAACCGAAAGAGTGAAAAAAGAAGATGAACTTGTTGAAACTGAAATAACAAATCAAAATACAGCACAGGCAGA
AGATTTAAGCTAAAAAAAAT

Downstream 100 bases:

>100_bases
TACCCTCTTTTCTTGACACCAACATTTCAAATAACAATTTCAGGCATTGTACAAGGTGTTGGTTTTCGGCCTTTTGTATA
CAATACTGCCATTCAGTTTA

Product: hydrogenase maturation protease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
METAVSIRKIDEFHSDGNTILVLGIGNYLMGDEGVGVHFINRIDKAQFPEGISFIDGGTGGFTLIPYIESHQKVIIVDAT
MDGKEEGTISLLKPRFSEDFPISLSGHNFGLKDMVEILSITDTMPEIYLYTITILKMDPMCMQLSPKVEAAIEKVTAEII
QQIEKIKI

Sequences:

>Translated_168_residues
METAVSIRKIDEFHSDGNTILVLGIGNYLMGDEGVGVHFINRIDKAQFPEGISFIDGGTGGFTLIPYIESHQKVIIVDAT
MDGKEEGTISLLKPRFSEDFPISLSGHNFGLKDMVEILSITDTMPEIYLYTITILKMDPMCMQLSPKVEAAIEKVTAEII
QQIEKIKI
>Mature_168_residues
METAVSIRKIDEFHSDGNTILVLGIGNYLMGDEGVGVHFINRIDKAQFPEGISFIDGGTGGFTLIPYIESHQKVIIVDAT
MDGKEEGTISLLKPRFSEDFPISLSGHNFGLKDMVEILSITDTMPEIYLYTITILKMDPMCMQLSPKVEAAIEKVTAEII
QQIEKIKI

Specific function: Not known. Could be involved in the processing of hydrogenase [H]

COG id: COG0680

COG function: function code C; Ni,Fe-hydrogenase maturation factor

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase A31 family [H]

Homologues:

Organism=Escherichia coli, GI1789367, Length=156, Percent_Identity=29.4871794871795, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787209, Length=106, Percent_Identity=35.8490566037736, Blast_Score=64, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004419
- InterPro:   IPR000671 [H]

Pfam domain/function: PF01750 HycI [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 18623; Mature: 18623

Theoretical pI: Translated: 4.44; Mature: 4.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.8 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METAVSIRKIDEFHSDGNTILVLGIGNYLMGDEGVGVHFINRIDKAQFPEGISFIDGGTG
CCCCHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCC
GFTLIPYIESHQKVIIVDATMDGKEEGTISLLKPRFSEDFPISLSGHNFGLKDMVEILSI
CEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHH
TDTMPEIYLYTITILKMDPMCMQLSPKVEAAIEKVTAEIIQQIEKIKI
HCCCCCEEEEEEEEEEECCHHEECCCHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
METAVSIRKIDEFHSDGNTILVLGIGNYLMGDEGVGVHFINRIDKAQFPEGISFIDGGTG
CCCCHHHHHHHHHCCCCCEEEEEECCCEEECCCCCCCHHHHHHHHHCCCCCCEEEECCCC
GFTLIPYIESHQKVIIVDATMDGKEEGTISLLKPRFSEDFPISLSGHNFGLKDMVEILSI
CEEEEEEECCCCEEEEEEECCCCCCCCEEEEECCCCCCCCCEEECCCCCCHHHHHHHHHH
TDTMPEIYLYTITILKMDPMCMQLSPKVEAAIEKVTAEIIQQIEKIKI
HCCCCCEEEEEEEEEEECCHHEECCCHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624446 [H]