Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301628

Identifier: 146301628

GI number: 146301628

Start: 4635395

End: 4636519

Strand: Reverse

Name: 146301628

Synonym: Fjoh_3889

Alternate gene names: NA

Gene position: 4636519-4635395 (Counterclockwise)

Preceding gene: 146301633

Following gene: 146301627

Centisome position: 76.05

GC content: 32.36

Gene sequence:

>1125_bases
ATGAAAAAAGCACGGCTTTATACTTTGACACTTATAGGTATTAGTATTGTTGTTCTAATTATCAGTTTCATTTCTTCCAC
TTACCTCTATCACTCAGCTAAGGAGAAATTGTGTAATAGTAAATTAGAATCAGGAGAAAGAGAAGTAAGGGAAATTTCAC
GGCTTTTAGAACAGCAGCTTCGCGGCGGTTTGTCTAAAGATCAGGTAATTCATAATCTTCAAATAAGTATAGAGAATACA
GATATAAAAAGTGATTTTATCTGTATGTATGATCAAAAAGGAATTGAACTGTGTCATCCTAATCCGGCATTAGTGGGTTT
AAAAATCAAGGAAGATAATTCTCAGGTTAACAGAACAGGACAGAAAGAGTTTAAACCCTTAAGTACAGTTTTGGAACAGG
GAGAAAAAATAGGAGGTATCCGCACATTTCCTAATAACCCGGAAAGAAAATCAGAAATTATAAACATAAATCCTGTTGCC
GGAACTGACTGGATGGTTGCTTCACATGCTAACCTTGCAGTTTTAGAGGAAGAACTTTCTGATCTGTATCTGCAGTTTGC
AGTAAGTCTTTTTTTGAGTACAGTATTTATAAGCATTTGCTGCTACATAATGATACGGCTTATATACAGAAAGTATGAGA
GTGTTTTTGATCTTGAAAAAGAAGAGTTAAATTATAGAGTAAACGAACTTCAGATTTTGAACCTGCAGTTAAATTCAAAT
CAGCAGAAACTGCAAAATTTGACCCATGATACCATTGAAGATGATAAATCAAAAGATTCTGAAACTCCAAAGAAAAGAAT
ACTGACTTATCATAAAGATGAATTGATAAAGCTGGATATAGAAAATATAGCCTATGTTTTGCTGGATACCGGAATAACTT
ACATTTATACTTTTGACAATCGTCAGTTTACAAGCAGCAATAGTCTTGACGAGATAATGAAATGGCTTGATCAGACCATT
TTTTACAGGGCAAACAGACAATTTATAGTCAATATTAATTCTATCAGCAGTATATTGCTTTATGGGAAAAACCAATTGAA
ATTGATTATAAAACCTGATTCAAAAATTGATATTATTATTAGTAAAAATAAAGTATCAGAATTTAAGAACTGGTTAGACC
AGTAA

Upstream 100 bases:

>100_bases
TTTGGACCTTAAAGCCGAAATATTGAAAGATGAATAAATTGCTTATTTTAGCCTAAACAAAATTTTCTAAACGATTTTCA
TTTAAGGAATATAAAAATAC

Downstream 100 bases:

>100_bases
TTAATGAAAGCGAATGCTGTTAAAGCTTCTATATACCATTTAAATCAGGATTGTAGAATATCCCTTTATTTTTTCAGGAA
TTTATTATTATAAGATTATT

Product: response regulator receiver protein

Products: NA

Alternate protein names: Two-Component System Response Regulator; Response Regulator Receiver Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQLRGGLSKDQVIHNLQISIENT
DIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTGQKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVA
GTDWMVASHANLAVLEEELSDLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN
QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDNRQFTSSNSLDEIMKWLDQTI
FYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIIISKNKVSEFKNWLDQ

Sequences:

>Translated_374_residues
MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQLRGGLSKDQVIHNLQISIENT
DIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTGQKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVA
GTDWMVASHANLAVLEEELSDLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN
QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDNRQFTSSNSLDEIMKWLDQTI
FYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIIISKNKVSEFKNWLDQ
>Mature_374_residues
MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQLRGGLSKDQVIHNLQISIENT
DIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTGQKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVA
GTDWMVASHANLAVLEEELSDLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN
QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDNRQFTSSNSLDEIMKWLDQTI
FYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIIISKNKVSEFKNWLDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43274; Mature: 43274

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQL
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RGGLSKDQVIHNLQISIENTDIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTG
HCCCCHHHEEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCEEEEEEECCCCHHHCCC
QKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVAGTDWMVASHANLAVLEEELS
HHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHH
DLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEECEEEEEEEEECCC
QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDN
HHHHHHCHHHHHCCCCCCCCCCHHHHHHEECCCCEEEEEHHHHEEEEEECCEEEEEEECC
RQFTSSNSLDEIMKWLDQTIFYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIII
CEECCCCCHHHHHHHHHHHHHEECCCEEEEEEHHHHEEEEECCCCEEEEECCCCCEEEEE
SKNKVSEFKNWLDQ
ECCHHHHHHHHHCC
>Mature Secondary Structure
MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQL
CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
RGGLSKDQVIHNLQISIENTDIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTG
HCCCCHHHEEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCEEEEEEECCCCHHHCCC
QKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVAGTDWMVASHANLAVLEEELS
HHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHH
DLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEECEEEEEEEEECCC
QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDN
HHHHHHCHHHHHCCCCCCCCCCHHHHHHEECCCCEEEEEHHHHEEEEEECCEEEEEEECC
RQFTSSNSLDEIMKWLDQTIFYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIII
CEECCCCCHHHHHHHHHHHHHEECCCEEEEEEHHHHEEEEECCCCEEEEECCCCCEEEEE
SKNKVSEFKNWLDQ
ECCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA