Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301628
Identifier: 146301628
GI number: 146301628
Start: 4635395
End: 4636519
Strand: Reverse
Name: 146301628
Synonym: Fjoh_3889
Alternate gene names: NA
Gene position: 4636519-4635395 (Counterclockwise)
Preceding gene: 146301633
Following gene: 146301627
Centisome position: 76.05
GC content: 32.36
Gene sequence:
>1125_bases ATGAAAAAAGCACGGCTTTATACTTTGACACTTATAGGTATTAGTATTGTTGTTCTAATTATCAGTTTCATTTCTTCCAC TTACCTCTATCACTCAGCTAAGGAGAAATTGTGTAATAGTAAATTAGAATCAGGAGAAAGAGAAGTAAGGGAAATTTCAC GGCTTTTAGAACAGCAGCTTCGCGGCGGTTTGTCTAAAGATCAGGTAATTCATAATCTTCAAATAAGTATAGAGAATACA GATATAAAAAGTGATTTTATCTGTATGTATGATCAAAAAGGAATTGAACTGTGTCATCCTAATCCGGCATTAGTGGGTTT AAAAATCAAGGAAGATAATTCTCAGGTTAACAGAACAGGACAGAAAGAGTTTAAACCCTTAAGTACAGTTTTGGAACAGG GAGAAAAAATAGGAGGTATCCGCACATTTCCTAATAACCCGGAAAGAAAATCAGAAATTATAAACATAAATCCTGTTGCC GGAACTGACTGGATGGTTGCTTCACATGCTAACCTTGCAGTTTTAGAGGAAGAACTTTCTGATCTGTATCTGCAGTTTGC AGTAAGTCTTTTTTTGAGTACAGTATTTATAAGCATTTGCTGCTACATAATGATACGGCTTATATACAGAAAGTATGAGA GTGTTTTTGATCTTGAAAAAGAAGAGTTAAATTATAGAGTAAACGAACTTCAGATTTTGAACCTGCAGTTAAATTCAAAT CAGCAGAAACTGCAAAATTTGACCCATGATACCATTGAAGATGATAAATCAAAAGATTCTGAAACTCCAAAGAAAAGAAT ACTGACTTATCATAAAGATGAATTGATAAAGCTGGATATAGAAAATATAGCCTATGTTTTGCTGGATACCGGAATAACTT ACATTTATACTTTTGACAATCGTCAGTTTACAAGCAGCAATAGTCTTGACGAGATAATGAAATGGCTTGATCAGACCATT TTTTACAGGGCAAACAGACAATTTATAGTCAATATTAATTCTATCAGCAGTATATTGCTTTATGGGAAAAACCAATTGAA ATTGATTATAAAACCTGATTCAAAAATTGATATTATTATTAGTAAAAATAAAGTATCAGAATTTAAGAACTGGTTAGACC AGTAA
Upstream 100 bases:
>100_bases TTTGGACCTTAAAGCCGAAATATTGAAAGATGAATAAATTGCTTATTTTAGCCTAAACAAAATTTTCTAAACGATTTTCA TTTAAGGAATATAAAAATAC
Downstream 100 bases:
>100_bases TTAATGAAAGCGAATGCTGTTAAAGCTTCTATATACCATTTAAATCAGGATTGTAGAATATCCCTTTATTTTTTCAGGAA TTTATTATTATAAGATTATT
Product: response regulator receiver protein
Products: NA
Alternate protein names: Two-Component System Response Regulator; Response Regulator Receiver Protein
Number of amino acids: Translated: 374; Mature: 374
Protein sequence:
>374_residues MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQLRGGLSKDQVIHNLQISIENT DIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTGQKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVA GTDWMVASHANLAVLEEELSDLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDNRQFTSSNSLDEIMKWLDQTI FYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIIISKNKVSEFKNWLDQ
Sequences:
>Translated_374_residues MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQLRGGLSKDQVIHNLQISIENT DIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTGQKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVA GTDWMVASHANLAVLEEELSDLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDNRQFTSSNSLDEIMKWLDQTI FYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIIISKNKVSEFKNWLDQ >Mature_374_residues MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQLRGGLSKDQVIHNLQISIENT DIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTGQKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVA GTDWMVASHANLAVLEEELSDLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDNRQFTSSNSLDEIMKWLDQTI FYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIIISKNKVSEFKNWLDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43274; Mature: 43274
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: PS50930 HTH_LYTTR
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RGGLSKDQVIHNLQISIENTDIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTG HCCCCHHHEEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCEEEEEEECCCCHHHCCC QKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVAGTDWMVASHANLAVLEEELS HHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHH DLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEECEEEEEEEEECCC QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDN HHHHHHCHHHHHCCCCCCCCCCHHHHHHEECCCCEEEEEHHHHEEEEEECCEEEEEEECC RQFTSSNSLDEIMKWLDQTIFYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIII CEECCCCCHHHHHHHHHHHHHEECCCEEEEEEHHHHEEEEECCCCEEEEECCCCCEEEEE SKNKVSEFKNWLDQ ECCHHHHHHHHHCC >Mature Secondary Structure MKKARLYTLTLIGISIVVLIISFISSTYLYHSAKEKLCNSKLESGEREVREISRLLEQQL CCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH RGGLSKDQVIHNLQISIENTDIKSDFICMYDQKGIELCHPNPALVGLKIKEDNSQVNRTG HCCCCHHHEEEEEEEEEECCCCCCCEEEEECCCCCEEECCCCCEEEEEEECCCCHHHCCC QKEFKPLSTVLEQGEKIGGIRTFPNNPERKSEIININPVAGTDWMVASHANLAVLEEELS HHHHHHHHHHHHCCHHCCCEECCCCCCCCCCCEEEECCCCCCCEEEECCCCHHHHHHHHH DLYLQFAVSLFLSTVFISICCYIMIRLIYRKYESVFDLEKEELNYRVNELQILNLQLNSN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCEECEEEEEEEEECCC QQKLQNLTHDTIEDDKSKDSETPKKRILTYHKDELIKLDIENIAYVLLDTGITYIYTFDN HHHHHHCHHHHHCCCCCCCCCCHHHHHHEECCCCEEEEEHHHHEEEEEECCEEEEEEECC RQFTSSNSLDEIMKWLDQTIFYRANRQFIVNINSISSILLYGKNQLKLIIKPDSKIDIII CEECCCCCHHHHHHHHHHHHHEECCCEEEEEEHHHHEEEEECCCCEEEEECCCCCEEEEE SKNKVSEFKNWLDQ ECCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA