Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
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Accession | NC_009441 |
Length | 6,096,872 |
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The map label for this gene is 146301623
Identifier: 146301623
GI number: 146301623
Start: 4631040
End: 4631444
Strand: Reverse
Name: 146301623
Synonym: Fjoh_3884
Alternate gene names: NA
Gene position: 4631444-4631040 (Counterclockwise)
Preceding gene: 146301624
Following gene: 146301621
Centisome position: 75.96
GC content: 31.11
Gene sequence:
>405_bases ATGAAATACAAAAACATATTACTAGTCAACGATAATACAGATGATGCAGAGATTTTTGTGTCAGTTTTGAATGCAATCAG CCATGAAATCAGATCTTCTGTAGAGGAAAGTGCACTTGAGGCTTTAAAAAAGCTTAAGGATTCAAAAATCTGTCCTGATA TAATCTTTTTGGATTATAATATGCCTTATTTTGATGGGAGCGGATTCCTTAAATTACTTCGTGATATTAAAGGCCTAAGA AAGATTCCAATTGTACTTTATTCCCGAAATTCAGGAATTATGCTGCAGGATGAAATAGACAAATTCAAAAGAGTGAAATT TTTGAAGAAACATGGCAGCTTCAAAAAGCTTTTTGAATCATTGCAAAAAATAATTATAGGTAAAAAAAGAGAAGATTGTA CTTGA
Upstream 100 bases:
>100_bases GTTAGTGTGCTGTGATATCGTTTTATTTTGTTATAAAATTGTATTCGATTTAAAGACAAAACGACTTTATTCCAGACTTT TTCCCTTAAATAGTAGTGGC
Downstream 100 bases:
>100_bases AATTATAATTTCATGCACGGATTAGATTTAACTACAAATTCTTAAATAAAAAAGGTTTTGAGTATTCTTAAAACCTTTTT TATTGCAGTTGTTTTTTAGT
Product: response regulator receiver protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 134; Mature: 134
Protein sequence:
>134_residues MKYKNILLVNDNTDDAEIFVSVLNAISHEIRSSVEESALEALKKLKDSKICPDIIFLDYNMPYFDGSGFLKLLRDIKGLR KIPIVLYSRNSGIMLQDEIDKFKRVKFLKKHGSFKKLFESLQKIIIGKKREDCT
Sequences:
>Translated_134_residues MKYKNILLVNDNTDDAEIFVSVLNAISHEIRSSVEESALEALKKLKDSKICPDIIFLDYNMPYFDGSGFLKLLRDIKGLR KIPIVLYSRNSGIMLQDEIDKFKRVKFLKKHGSFKKLFESLQKIIIGKKREDCT >Mature_134_residues MKYKNILLVNDNTDDAEIFVSVLNAISHEIRSSVEESALEALKKLKDSKICPDIIFLDYNMPYFDGSGFLKLLRDIKGLR KIPIVLYSRNSGIMLQDEIDKFKRVKFLKKHGSFKKLFESLQKIIIGKKREDCT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15515; Mature: 15515
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: PS50110 RESPONSE_REGULATORY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYKNILLVNDNTDDAEIFVSVLNAISHEIRSSVEESALEALKKLKDSKICPDIIFLDYN CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC MPYFDGSGFLKLLRDIKGLRKIPIVLYSRNSGIMLQDEIDKFKRVKFLKKHGSFKKLFES CCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHH LQKIIIGKKREDCT HHHHHCCCCCCCCC >Mature Secondary Structure MKYKNILLVNDNTDDAEIFVSVLNAISHEIRSSVEESALEALKKLKDSKICPDIIFLDYN CCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECC MPYFDGSGFLKLLRDIKGLRKIPIVLYSRNSGIMLQDEIDKFKRVKFLKKHGSFKKLFES CCCCCCHHHHHHHHHHHHHHHCCEEEEECCCCEEEHHHHHHHHHHHHHHHCCCHHHHHHH LQKIIIGKKREDCT HHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA