Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301582

Identifier: 146301582

GI number: 146301582

Start: 4556222

End: 4558012

Strand: Reverse

Name: 146301582

Synonym: Fjoh_3843

Alternate gene names: NA

Gene position: 4558012-4556222 (Counterclockwise)

Preceding gene: 146301583

Following gene: 146301579

Centisome position: 74.76

GC content: 33.61

Gene sequence:

>1791_bases
ATGAAAAAAAGATTTTTCTCAATATTTTTAGCACTATGCGTTTGTATTTCTCTTACTGCACAGCACAAAAAGCAGACTAT
CAAATTAAACCAGCTGATTGACAATCTTGAAATAAAAAGAGGTGAGGAGCATTTTTTTAAAATTAAACTTACCGCAGACA
CCTATTATGCTCTAAATGTACAGCAGCAGGGAATAGATCTTATAGTTTCGATTATAAACAAAGAAGGGAAACTAATGGCC
GAAGTTGACTCTCCAAATGGCAAGAACGGTCCTGAGAAAATTTTGTTTTCTCCTGACAAAACCGATGAATTTGAAGTTGG
GATTAAACCTCTTGATGAAAAATCAAATTCAGAGTCTGGAAAATATACAATTCGACTGCAAAAAGTTCCTAATACACTTG
AAAAAATCCCGGTTAAAAATCTTCTTTCTGATTTTGATTTACTCCAGAATGCCTATTACGAAACCAGAGTTGGTCTTTGG
TACAATTCAAGAACACAATTTGACAGTATCTGTAATCTGCAGAAAAGCAAAATAAAAGCACCTATGAATGCTTTAGAATT
TTACAGGATACTTGCTCCGGTGGTTTCGTTTACCAAGGAAGGACACTGCAACATTAAAATTTCTGATGAAACTACAGCTT
TTTTAAAGCAAAAGGGAACTTATCTGCCATTTGGAATTAAAGTTTTAGATAAAAAAATATATGTCATAAATGATTATAAA
GATTTCAAATTAAAAGGTCTTGTTCTTTCAAAAATAAACGGTGAAGCCATAGAAAATATCATGGCAAAAATGCTGGAAAT
TGAGCCCGCAGACGGATTTAATATGACGAGTAAATACCGATGGATTGAAGGAGCATTTTCTAAATATTATGCACGTTATT
TTCCTGCTTCCAAATTTATTACACTGGAACTTCTAAATCCTGATAACAATACTAAAATAGTTTATGAAAACATTCCTTCC
TGCACTTTTAAGGAGTTCACAAAACTATATGAAGAAATTAAAAAGCAGGTTCCTAATTATACATTCAGTAAATCATCTGA
TTTTTCTATAGATCCAATAACTTCAACAGCAGTTATTACGGTCAACACTTTTAGTTTGGGAAGTTATACTGATAAGCGAA
AAGGATTTCAGTTATTTCTGGAAAAAGCCTTTGACAGCATTTCTTCTCAAAAAATAAAACATCTGATTATTGATATCAGA
AAAAATGAAGGAGGAGAGCAGGGAATGGAAGATCACTTTTTATCTTACCTGACCAATGAAGAGTATAAAAAATACAAATA
TGTAGAGATTCCAGGGTTTACCTATTCATTTCTGGAGCATACTAATTATGCAGGTCAAAAAGAAATCCTGATCGAAGAAT
TAAAGGAGGATTTTTATCTTTCAACTGACGGCAGATACTTAAATAAAGAGGGACATTATATAGGGGAGAAACCGAATATA
AAAAACTTTAAAGGAGACCTTTATATTTTAATTTCGGGTCTCACTTTTTCGGGAGGTTCAGAATTTGCCGCACTGGCAAA
AAACTATACTCATGCAAAATTCATTGGTGAGGAAACCGGCGGTGGTTATTACGGGAATTCAAGCGGCAGTTTTCTAAGTT
TCACTCTTCCTAATTCTGCTGTAACAGGCCGTATTCCCTTATGTAAATTTGTAATAGAACCTAAAGCTGATTCAATTCCC
TTTGGGCGCGGCGTTTTGCCTGATTATGAATTACAGCCAACCATCAAGGAGTATCTTGCAGGATATGATAGTGAAATGGA
ATATGTAAAAACACTGATTAGAAAGAAATAA

Upstream 100 bases:

>100_bases
TCTGCAGTATAAAATTTCTTAAATTTCCTAATACTGCAATATCGTACAACAGAGTTTTGTTACAGCATTGTATTTTTGGG
TATTCTAATTCTGATATGAA

Downstream 100 bases:

>100_bases
ATAAAGGATCAATTTTGCTCTACATGATTATCAAAATTGTTAGTTAAAAGGATTGCTTTTTTCTCTTTACTTTTTTCTTT
CAGATCGCTTTTAATTACTG

Product: peptidase S41

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 596; Mature: 596

Protein sequence:

>596_residues
MKKRFFSIFLALCVCISLTAQHKKQTIKLNQLIDNLEIKRGEEHFFKIKLTADTYYALNVQQQGIDLIVSIINKEGKLMA
EVDSPNGKNGPEKILFSPDKTDEFEVGIKPLDEKSNSESGKYTIRLQKVPNTLEKIPVKNLLSDFDLLQNAYYETRVGLW
YNSRTQFDSICNLQKSKIKAPMNALEFYRILAPVVSFTKEGHCNIKISDETTAFLKQKGTYLPFGIKVLDKKIYVINDYK
DFKLKGLVLSKINGEAIENIMAKMLEIEPADGFNMTSKYRWIEGAFSKYYARYFPASKFITLELLNPDNNTKIVYENIPS
CTFKEFTKLYEEIKKQVPNYTFSKSSDFSIDPITSTAVITVNTFSLGSYTDKRKGFQLFLEKAFDSISSQKIKHLIIDIR
KNEGGEQGMEDHFLSYLTNEEYKKYKYVEIPGFTYSFLEHTNYAGQKEILIEELKEDFYLSTDGRYLNKEGHYIGEKPNI
KNFKGDLYILISGLTFSGGSEFAALAKNYTHAKFIGEETGGGYYGNSSGSFLSFTLPNSAVTGRIPLCKFVIEPKADSIP
FGRGVLPDYELQPTIKEYLAGYDSEMEYVKTLIRKK

Sequences:

>Translated_596_residues
MKKRFFSIFLALCVCISLTAQHKKQTIKLNQLIDNLEIKRGEEHFFKIKLTADTYYALNVQQQGIDLIVSIINKEGKLMA
EVDSPNGKNGPEKILFSPDKTDEFEVGIKPLDEKSNSESGKYTIRLQKVPNTLEKIPVKNLLSDFDLLQNAYYETRVGLW
YNSRTQFDSICNLQKSKIKAPMNALEFYRILAPVVSFTKEGHCNIKISDETTAFLKQKGTYLPFGIKVLDKKIYVINDYK
DFKLKGLVLSKINGEAIENIMAKMLEIEPADGFNMTSKYRWIEGAFSKYYARYFPASKFITLELLNPDNNTKIVYENIPS
CTFKEFTKLYEEIKKQVPNYTFSKSSDFSIDPITSTAVITVNTFSLGSYTDKRKGFQLFLEKAFDSISSQKIKHLIIDIR
KNEGGEQGMEDHFLSYLTNEEYKKYKYVEIPGFTYSFLEHTNYAGQKEILIEELKEDFYLSTDGRYLNKEGHYIGEKPNI
KNFKGDLYILISGLTFSGGSEFAALAKNYTHAKFIGEETGGGYYGNSSGSFLSFTLPNSAVTGRIPLCKFVIEPKADSIP
FGRGVLPDYELQPTIKEYLAGYDSEMEYVKTLIRKK
>Mature_596_residues
MKKRFFSIFLALCVCISLTAQHKKQTIKLNQLIDNLEIKRGEEHFFKIKLTADTYYALNVQQQGIDLIVSIINKEGKLMA
EVDSPNGKNGPEKILFSPDKTDEFEVGIKPLDEKSNSESGKYTIRLQKVPNTLEKIPVKNLLSDFDLLQNAYYETRVGLW
YNSRTQFDSICNLQKSKIKAPMNALEFYRILAPVVSFTKEGHCNIKISDETTAFLKQKGTYLPFGIKVLDKKIYVINDYK
DFKLKGLVLSKINGEAIENIMAKMLEIEPADGFNMTSKYRWIEGAFSKYYARYFPASKFITLELLNPDNNTKIVYENIPS
CTFKEFTKLYEEIKKQVPNYTFSKSSDFSIDPITSTAVITVNTFSLGSYTDKRKGFQLFLEKAFDSISSQKIKHLIIDIR
KNEGGEQGMEDHFLSYLTNEEYKKYKYVEIPGFTYSFLEHTNYAGQKEILIEELKEDFYLSTDGRYLNKEGHYIGEKPNI
KNFKGDLYILISGLTFSGGSEFAALAKNYTHAKFIGEETGGGYYGNSSGSFLSFTLPNSAVTGRIPLCKFVIEPKADSIP
FGRGVLPDYELQPTIKEYLAGYDSEMEYVKTLIRKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 68133; Mature: 68133

Theoretical pI: Translated: 8.56; Mature: 8.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKRFFSIFLALCVCISLTAQHKKQTIKLNQLIDNLEIKRGEEHFFKIKLTADTYYALNV
CCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEE
QQQGIDLIVSIINKEGKLMAEVDSPNGKNGPEKILFSPDKTDEFEVGIKPLDEKSNSESG
CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCC
KYTIRLQKVPNTLEKIPVKNLLSDFDLLQNAYYETRVGLWYNSRTQFDSICNLQKSKIKA
EEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHCCHHHHHHC
PMNALEFYRILAPVVSFTKEGHCNIKISDETTAFLKQKGTYLPFGIKVLDKKIYVINDYK
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEECCEEEEEECCC
DFKLKGLVLSKINGEAIENIMAKMLEIEPADGFNMTSKYRWIEGAFSKYYARYFPASKFI
CCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
TLELLNPDNNTKIVYENIPSCTFKEFTKLYEEIKKQVPNYTFSKSSDFSIDPITSTAVIT
EEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE
VNTFSLGSYTDKRKGFQLFLEKAFDSISSQKIKHLIIDIRKNEGGEQGMEDHFLSYLTNE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHCCC
EYKKYKYVEIPGFTYSFLEHTNYAGQKEILIEELKEDFYLSTDGRYLNKEGHYIGEKPNI
CHHEEEEEECCCCEEHHHHHCCCCCHHHHHHHHHHHHEEECCCCCEECCCCCCCCCCCCC
KNFKGDLYILISGLTFSGGSEFAALAKNYTHAKFIGEETGGGYYGNSSGSFLSFTLPNSA
CCCCCCEEEEEEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCC
VTGRIPLCKFVIEPKADSIPFGRGVLPDYELQPTIKEYLAGYDSEMEYVKTLIRKK
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCC
>Mature Secondary Structure
MKKRFFSIFLALCVCISLTAQHKKQTIKLNQLIDNLEIKRGEEHFFKIKLTADTYYALNV
CCHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHCCCCCCEEEEEEEEECEEEEEEE
QQQGIDLIVSIINKEGKLMAEVDSPNGKNGPEKILFSPDKTDEFEVGIKPLDEKSNSESG
CCCCHHHHHHHHCCCCCEEEEECCCCCCCCCCCEEECCCCCCCEEECCCCCCCCCCCCCC
KYTIRLQKVPNTLEKIPVKNLLSDFDLLQNAYYETRVGLWYNSRTQFDSICNLQKSKIKA
EEEEEEECCCCHHHHCCHHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHCCHHHHHHC
PMNALEFYRILAPVVSFTKEGHCNIKISDETTAFLKQKGTYLPFGIKVLDKKIYVINDYK
CHHHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCCCCEEEECCEEEEEECCC
DFKLKGLVLSKINGEAIENIMAKMLEIEPADGFNMTSKYRWIEGAFSKYYARYFPASKFI
CCEEEEEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEE
TLELLNPDNNTKIVYENIPSCTFKEFTKLYEEIKKQVPNYTFSKSSDFSIDPITSTAVIT
EEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEEE
VNTFSLGSYTDKRKGFQLFLEKAFDSISSQKIKHLIIDIRKNEGGEQGMEDHFLSYLTNE
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCCCCCHHHHHHHHHCCC
EYKKYKYVEIPGFTYSFLEHTNYAGQKEILIEELKEDFYLSTDGRYLNKEGHYIGEKPNI
CHHEEEEEECCCCEEHHHHHCCCCCHHHHHHHHHHHHEEECCCCCEECCCCCCCCCCCCC
KNFKGDLYILISGLTFSGGSEFAALAKNYTHAKFIGEETGGGYYGNSSGSFLSFTLPNSA
CCCCCCEEEEEEEEEECCCCHHHHHHCCCCCEEEECCCCCCCCCCCCCCCEEEEECCCCC
VTGRIPLCKFVIEPKADSIPFGRGVLPDYELQPTIKEYLAGYDSEMEYVKTLIRKK
CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA