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The map label for this gene is insF1 [H]

Identifier: 146301517

GI number: 146301517

Start: 4479793

End: 4480953

Strand: Direct

Name: insF1 [H]

Synonym: Fjoh_3778

Alternate gene names: 146301517

Gene position: 4479793-4480953 (Clockwise)

Preceding gene: 146301516

Following gene: 146301518

Centisome position: 73.48

GC content: 36.78

Gene sequence:

>1161_bases
ATGAAAATAAACCGAAAATTATATGATCGTGATTTCAAAATAAATGCAGTTAAAGTAAGCTATGAAAAAAACAGCCTTAA
GCGATATGCTGAAGAAATTGGGATACTGCCCTGCTTACTTACCAGATGGCGCAAGGAATTTCAGCAGTTTGGAACCGCCA
GTTTTCAGGGACCGGGATTTGTCAGGGTTCATCCGGATCAGAAAAGAACTTTTGAGCTCGAAAAAAGAAAAAAGGAATCC
GAACTGAGATTTGAAATTTTAAAACAGGGAGCGCCATTTCTCTTGCAGGGAAACCTGCCAGCCTATCAATTTATAAAAGA
CAATGAAAAAAAATACGGTGTTGTGCGAATGTGCGAGGTTTTAGGTATTGGTTCAAACCGATACTTAACTTGGAAATACA
AAGGTATTTCAGAGAAAAAAAAATATTTAATCTTATTACGAAAAGAGATCACTTCCATTTTTTTAGATTTTAAAAAGCTC
AAAGGCAAGAATCAAATAACAAAAGAGCTCAACAACCGAGGCTTTACTATAGATCACAGGAGAGTATCATTTCATATGAA
AACTCTAGGACTGCGCAGGATTAAAAAAAAATTTAAAATAACAACAACAGACTCAAAACACAGTCTTTACACTCCACCTA
ATGTACTAAACAGAAACTTTACAGTTTCCGAACCTGGTAAATTCTGGGTTTCTGATATTACCTATCTTCATACCACTAAA
GGATTTCTATACCTGACCATAATCATGGATCTGTATGATAGAAAAATAATAGGATGGAATATCAGCTCGGAACTTTCCAC
AATAAAAACCACAATACCGGCCTGGGAAATGGCTGTACGCAATCGAAAAACCGAGGAGGGCCTGGTATTCCATTCTGATC
GCGGTGTTCAATATGCCAGTAAAGCCTTCGCGGAAAAACTGGAGTCCTACAACTGCATTAGAAGTATGAGCGGTAAAGGA
AACCACTTTGACAATGCCGTTGCGGAAGGCTTTTTCAGCACCTTAAAAAGGGAATTGATCAGAGGTGAAAATAGAGTCAT
GACACCAAAGCAGATGAGGAATCAGATATCTGAATTTATTGAAAACTGGTACAATAAAAAAAGAATCCACACGTCGCTGA
ATTTTAAAACTATAGAAGAGTTTAACACTTTAAATTCATAG

Upstream 100 bases:

>100_bases
TCTTGGTATTTTACTCTACCTTCAATATACCAACTAGTTATCCTCAAAACCAAAATGTACAACGGTACAACTTAATAATT
TAAATAACTGAAATTGAATT

Downstream 100 bases:

>100_bases
TATGGATGGATACAAAACTAATATGTACCTGCTTTTAAAAACATAATTGAAATGTCATAAGTGTATGAAAAAACAACGCA
GATCATATAACAAGTTATTT

Product: integrase catalytic subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 386; Mature: 386

Protein sequence:

>386_residues
MKINRKLYDRDFKINAVKVSYEKNSLKRYAEEIGILPCLLTRWRKEFQQFGTASFQGPGFVRVHPDQKRTFELEKRKKES
ELRFEILKQGAPFLLQGNLPAYQFIKDNEKKYGVVRMCEVLGIGSNRYLTWKYKGISEKKKYLILLRKEITSIFLDFKKL
KGKNQITKELNNRGFTIDHRRVSFHMKTLGLRRIKKKFKITTTDSKHSLYTPPNVLNRNFTVSEPGKFWVSDITYLHTTK
GFLYLTIIMDLYDRKIIGWNISSELSTIKTTIPAWEMAVRNRKTEEGLVFHSDRGVQYASKAFAEKLESYNCIRSMSGKG
NHFDNAVAEGFFSTLKRELIRGENRVMTPKQMRNQISEFIENWYNKKRIHTSLNFKTIEEFNTLNS

Sequences:

>Translated_386_residues
MKINRKLYDRDFKINAVKVSYEKNSLKRYAEEIGILPCLLTRWRKEFQQFGTASFQGPGFVRVHPDQKRTFELEKRKKES
ELRFEILKQGAPFLLQGNLPAYQFIKDNEKKYGVVRMCEVLGIGSNRYLTWKYKGISEKKKYLILLRKEITSIFLDFKKL
KGKNQITKELNNRGFTIDHRRVSFHMKTLGLRRIKKKFKITTTDSKHSLYTPPNVLNRNFTVSEPGKFWVSDITYLHTTK
GFLYLTIIMDLYDRKIIGWNISSELSTIKTTIPAWEMAVRNRKTEEGLVFHSDRGVQYASKAFAEKLESYNCIRSMSGKG
NHFDNAVAEGFFSTLKRELIRGENRVMTPKQMRNQISEFIENWYNKKRIHTSLNFKTIEEFNTLNS
>Mature_386_residues
MKINRKLYDRDFKINAVKVSYEKNSLKRYAEEIGILPCLLTRWRKEFQQFGTASFQGPGFVRVHPDQKRTFELEKRKKES
ELRFEILKQGAPFLLQGNLPAYQFIKDNEKKYGVVRMCEVLGIGSNRYLTWKYKGISEKKKYLILLRKEITSIFLDFKKL
KGKNQITKELNNRGFTIDHRRVSFHMKTLGLRRIKKKFKITTTDSKHSLYTPPNVLNRNFTVSEPGKFWVSDITYLHTTK
GFLYLTIIMDLYDRKIIGWNISSELSTIKTTIPAWEMAVRNRKTEEGLVFHSDRGVQYASKAFAEKLESYNCIRSMSGKG
NHFDNAVAEGFFSTLKRELIRGENRVMTPKQMRNQISEFIENWYNKKRIHTSLNFKTIEEFNTLNS

Specific function: Involved in the transposition of the insertion sequence IS3 [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 integrase catalytic domain [H]

Homologues:

Organism=Homo sapiens, GI310129419, Length=242, Percent_Identity=28.5123966942149, Blast_Score=121, Evalue=1e-27,
Organism=Escherichia coli, GI1788405, Length=287, Percent_Identity=32.0557491289199, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1787263, Length=287, Percent_Identity=32.0557491289199, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1786753, Length=287, Percent_Identity=32.0557491289199, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1786570, Length=287, Percent_Identity=32.0557491289199, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1786490, Length=287, Percent_Identity=32.0557491289199, Blast_Score=162, Evalue=3e-41,
Organism=Escherichia coli, GI1789981, Length=251, Percent_Identity=30.6772908366534, Blast_Score=109, Evalue=4e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001584
- InterPro:   IPR012337 [H]

Pfam domain/function: PF00665 rve [H]

EC number: NA

Molecular weight: Translated: 45517; Mature: 45517

Theoretical pI: Translated: 10.60; Mature: 10.60

Prosite motif: PS50994 INTEGRASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRKLYDRDFKINAVKVSYEKNSLKRYAEEIGILPCLLTRWRKEFQQFGTASFQGPGF
CCCCCCHHCCCEEEEEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEE
VRVHPDQKRTFELEKRKKESELRFEILKQGAPFLLQGNLPAYQFIKDNEKKYGVVRMCEV
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHH
LGIGSNRYLTWKYKGISEKKKYLILLRKEITSIFLDFKKLKGKNQITKELNNRGFTIDHR
HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECC
RVSFHMKTLGLRRIKKKFKITTTDSKHSLYTPPNVLNRNFTVSEPGKFWVSDITYLHTTK
EEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCEECCCCCCHHHHEEEEECCC
GFLYLTIIMDLYDRKIIGWNISSELSTIKTTIPAWEMAVRNRKTEEGLVFHSDRGVQYAS
CHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCHHHH
KAFAEKLESYNCIRSMSGKGNHFDNAVAEGFFSTLKRELIRGENRVMTPKQMRNQISEFI
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ENWYNKKRIHTSLNFKTIEEFNTLNS
HHHHCCCEEEECCCHHHHHHHHCCCC
>Mature Secondary Structure
MKINRKLYDRDFKINAVKVSYEKNSLKRYAEEIGILPCLLTRWRKEFQQFGTASFQGPGF
CCCCCCHHCCCEEEEEEEEEECHHHHHHHHHHHCHHHHHHHHHHHHHHHHCCCCCCCCEE
VRVHPDQKRTFELEKRKKESELRFEILKQGAPFLLQGNLPAYQFIKDNEKKYGVVRMCEV
EEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHCCCCCCHHHHHHHHHH
LGIGSNRYLTWKYKGISEKKKYLILLRKEITSIFLDFKKLKGKNQITKELNNRGFTIDHR
HCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCEEECC
RVSFHMKTLGLRRIKKKFKITTTDSKHSLYTPPNVLNRNFTVSEPGKFWVSDITYLHTTK
EEEEHHHHHHHHHHHHHHEEEECCCCCCCCCCHHHHCCCCEECCCCCCHHHHEEEEECCC
GFLYLTIIMDLYDRKIIGWNISSELSTIKTTIPAWEMAVRNRKTEEGLVFHSDRGVQYAS
CHHHHHHHHHHHCCEEEECCCHHHHHHHHHHCCHHHHHHHCCCCCCCEEEECCCCCHHHH
KAFAEKLESYNCIRSMSGKGNHFDNAVAEGFFSTLKRELIRGENRVMTPKQMRNQISEFI
HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
ENWYNKKRIHTSLNFKTIEEFNTLNS
HHHHCCCEEEECCCHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2987844; 9278503 [H]