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The map label for this gene is yfjY [C]

Identifier: 146301504

GI number: 146301504

Start: 4462632

End: 4463099

Strand: Reverse

Name: yfjY [C]

Synonym: Fjoh_3765

Alternate gene names: 146301504

Gene position: 4463099-4462632 (Counterclockwise)

Preceding gene: 146301506

Following gene: 146301501

Centisome position: 73.2

GC content: 44.23

Gene sequence:

>468_bases
ATGAAAACTCTACAAAACAACAGCTGGAAAAACGTGTCAGAAATCGATCTGATTTATAAAACAAAAATTAAAAATTCCCA
GAGACCCCATGTTACATCTTCCCAATATGCCTATAGCCTGATAAAAGACTGCTGGGATCCCGGCAAGATTGAATTTCTGG
AGCAGTTCAAAGTACTGCTGCTCAACCAGTCCAATAAAGTACTCGGCATTTATGAAGTTTCCTCAGGAGGCATCACCAGC
ACTGTAGTGGATGTCAGACTGCTCTTTGCCGCGGCGCTTAAAGCCGGTGCCGCAGGGCTGATCATTGCCCACAACCATCC
ATCGGGAAATGTCCTGCCTTCAGAACCAGACAAACATATTACCAAAAAGATTTCCATGGCAGGCGAAGTTCTGGATATCA
AGCTGCTGGATCATCTGATTGTTACCTCAGAGCATTATTATTCCTTTGCAGATCAGGGCGCTTTATAG

Upstream 100 bases:

>100_bases
ATAAATGCAGGACAGCCGTCCTGCTTTATTGCGTTGCTTTCTGCGCTTGCTCCCTTCTGCCCGAAGGCGGTGCTAAAATT
AATCTTAAATATTTAGCATC

Downstream 100 bases:

>100_bases
CGCCTTTTACTATTTTTTAAACCTCTTAATACGGTTCTGGAGTGCTGTATGGGAAAAGCTTATAATCCTGTAAGGACGTG
CGAAGATCTTGTAAGGCAGT

Product: DNA repair protein RadC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MKTLQNNSWKNVSEIDLIYKTKIKNSQRPHVTSSQYAYSLIKDCWDPGKIEFLEQFKVLLLNQSNKVLGIYEVSSGGITS
TVVDVRLLFAAALKAGAAGLIIAHNHPSGNVLPSEPDKHITKKISMAGEVLDIKLLDHLIVTSEHYYSFADQGAL

Sequences:

>Translated_155_residues
MKTLQNNSWKNVSEIDLIYKTKIKNSQRPHVTSSQYAYSLIKDCWDPGKIEFLEQFKVLLLNQSNKVLGIYEVSSGGITS
TVVDVRLLFAAALKAGAAGLIIAHNHPSGNVLPSEPDKHITKKISMAGEVLDIKLLDHLIVTSEHYYSFADQGAL
>Mature_155_residues
MKTLQNNSWKNVSEIDLIYKTKIKNSQRPHVTSSQYAYSLIKDCWDPGKIEFLEQFKVLLLNQSNKVLGIYEVSSGGITS
TVVDVRLLFAAALKAGAAGLIIAHNHPSGNVLPSEPDKHITKKISMAGEVLDIKLLDHLIVTSEHYYSFADQGAL

Specific function: Unknown

COG id: COG2003

COG function: function code L; DNA repair proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0758 family [H]

Homologues:

Organism=Escherichia coli, GI1788997, Length=102, Percent_Identity=44.1176470588235, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI2367100, Length=102, Percent_Identity=40.1960784313725, Blast_Score=84, Evalue=5e-18,
Organism=Escherichia coli, GI1788312, Length=102, Percent_Identity=41.1764705882353, Blast_Score=83, Evalue=7e-18,
Organism=Escherichia coli, GI87082300, Length=100, Percent_Identity=37, Blast_Score=77, Evalue=5e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003583
- InterPro:   IPR010994
- InterPro:   IPR001405
- InterPro:   IPR020891 [H]

Pfam domain/function: PF04002 DUF2466 [H]

EC number: NA

Molecular weight: Translated: 17153; Mature: 17153

Theoretical pI: Translated: 8.44; Mature: 8.44

Prosite motif: PS01302 RADC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKTLQNNSWKNVSEIDLIYKTKIKNSQRPHVTSSQYAYSLIKDCWDPGKIEFLEQFKVLL
CCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEE
LNQSNKVLGIYEVSSGGITSTVVDVRLLFAAALKAGAAGLIIAHNHPSGNVLPSEPDKHI
ECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHH
TKKISMAGEVLDIKLLDHLIVTSEHYYSFADQGAL
HHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCC
>Mature Secondary Structure
MKTLQNNSWKNVSEIDLIYKTKIKNSQRPHVTSSQYAYSLIKDCWDPGKIEFLEQFKVLL
CCCCCCCCCCCCHHHHEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHHHEE
LNQSNKVLGIYEVSSGGITSTVVDVRLLFAAALKAGAAGLIIAHNHPSGNVLPSEPDKHI
ECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCCHHHH
TKKISMAGEVLDIKLLDHLIVTSEHYYSFADQGAL
HHHHHHCCHHHHHHHHHHHHHCCHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA