| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301400
Identifier: 146301400
GI number: 146301400
Start: 4351405
End: 4352913
Strand: Direct
Name: 146301400
Synonym: Fjoh_3658
Alternate gene names: NA
Gene position: 4351405-4352913 (Clockwise)
Preceding gene: 146301399
Following gene: 146301401
Centisome position: 71.37
GC content: 28.69
Gene sequence:
>1509_bases ATGAGAATTCTTTTAGATACTAATATCATTGTCCATAGAGAAGCTAGTAAAGTATACAATCAAGACATAGGCCTTTTATT TAATTGGTTGGACAAAATGCATTTTGAAAAATGTGTCCACCCCTTGTCAATTGAAGAAATTTCGACATACAAGGATATTG ATGTAGTCAACACTATGAAAGTTAAAGTTGAGAACTACAATGTGCTTAAAACTATTTCTCCAGACACAGAAGGAATAAAT CAACTAAGATTAATTGATAAATCGGTTAACGATAGTAATGATACATCGATACTAAACGAATTAGTTAATAATCGAGTAAA TTTTTTAATTACAGAAGATAAAGGAATTCACAGAAAAGCTAAAATACTTGGAATTTCAGATAAAGTCTATAAGATAGATG CTTTTATTGAAAAATTAGTTTTTGAAAATCCAGCCCTTTCTGACTATAAAGTATTATCAGTTAAAAAAGAATATTTTGGA AATATAGATCTTAAGGATAGTTTTTTTGATTCTTTTAAGGATGATTATGCGGAATTTGAAAACTGGTTCAATTCTAAGGC AGACAAAGAATCCTATATCTGTCTAGTAGAAAATGAAGTTAAAGCTTTTCTGTTTCTCAAAATAGAAAACACTGATGAGA ATTACAATGACATAATTCCTCCCTTCTCTTCGAAAAAAAGATTAAAAATAGGTACATTTAAAGTCACTTCAACAGGATAT AAACTTGGTGAGCGATTCTTAAAAGTGATTTTTGATAATGCTTTAGTAAATAACGTTGATGAAATCTATGTTACAATCTT TGATAAAAGGGAAGAGCAACAAAGATTAATTAGTTTACTTGAGGAATGGGGATTTAAATATTGGGGAACTAAATCGACTA AAAATGGGGTTGAGAATGTTTATGTTAGGGATTTCGCAAAAATTTTATTAGACAATCCACGAAAGTGTTTTCCATTTGTT GGGAGAAGATCACGAATATTTATCAATCCTATTTACCCTGACTATCATACAGAATTATTTCCAGATTCGATACTTAACAA TGAATCTCCACAAGATTATATAGAAAATGAACCACATAGAAATGCATTAAAAAAAGTTTATATTTCACGTTCTTATAGAA AAGATTTGAAGCCAGGGGACATAATTTTATTTTATAGAACGGGAGGAAAGTATGCGGGCGTGTTATCAACTATTGGAGTT GTAGAAAATGTCATTTTAAATATAACTAGTGAAGAGGATTTTATAAGATTATGTAGAAAAAGAAGCGTTTTTGATGATAA TGAACTTAAAACTTGGTGGAACTATAATAAATTTAACAGGCCTTTTATTGTAAATTTCCTTTACATAGACTCTTTTCCGA AGCCAAAAGTTAATTTACAAAGATTAATAGAATTAGGAGTTATTAAATCAATTAATGATGTACCTAGAGGTTTTGTTCAA ATTGAAAACGTTAAATTTGAAGAATTTTTAAAAGAAGCAAGAGCAAATGAAAGTTATATTGTCGATTAA
Upstream 100 bases:
>100_bases AAATCAGTTTTGCGACTGAAATAAGTACATTATTGCAAATTCCTCTCCTTTGTATTGATAGTGAGGAATTAAATTTAGAA CAACTTTTAAATTTTATAAA
Downstream 100 bases:
>100_bases ACCTTATTACGCAGAAAAAATTTTAAACGGAGAGAAGACCTACGAGTTAAGGAAATCAATATTTAAAGCACCTAATGTAA AAACTGTAATAATATATGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 502; Mature: 502
Protein sequence:
>502_residues MRILLDTNIIVHREASKVYNQDIGLLFNWLDKMHFEKCVHPLSIEEISTYKDIDVVNTMKVKVENYNVLKTISPDTEGIN QLRLIDKSVNDSNDTSILNELVNNRVNFLITEDKGIHRKAKILGISDKVYKIDAFIEKLVFENPALSDYKVLSVKKEYFG NIDLKDSFFDSFKDDYAEFENWFNSKADKESYICLVENEVKAFLFLKIENTDENYNDIIPPFSSKKRLKIGTFKVTSTGY KLGERFLKVIFDNALVNNVDEIYVTIFDKREEQQRLISLLEEWGFKYWGTKSTKNGVENVYVRDFAKILLDNPRKCFPFV GRRSRIFINPIYPDYHTELFPDSILNNESPQDYIENEPHRNALKKVYISRSYRKDLKPGDIILFYRTGGKYAGVLSTIGV VENVILNITSEEDFIRLCRKRSVFDDNELKTWWNYNKFNRPFIVNFLYIDSFPKPKVNLQRLIELGVIKSINDVPRGFVQ IENVKFEEFLKEARANESYIVD
Sequences:
>Translated_502_residues MRILLDTNIIVHREASKVYNQDIGLLFNWLDKMHFEKCVHPLSIEEISTYKDIDVVNTMKVKVENYNVLKTISPDTEGIN QLRLIDKSVNDSNDTSILNELVNNRVNFLITEDKGIHRKAKILGISDKVYKIDAFIEKLVFENPALSDYKVLSVKKEYFG NIDLKDSFFDSFKDDYAEFENWFNSKADKESYICLVENEVKAFLFLKIENTDENYNDIIPPFSSKKRLKIGTFKVTSTGY KLGERFLKVIFDNALVNNVDEIYVTIFDKREEQQRLISLLEEWGFKYWGTKSTKNGVENVYVRDFAKILLDNPRKCFPFV GRRSRIFINPIYPDYHTELFPDSILNNESPQDYIENEPHRNALKKVYISRSYRKDLKPGDIILFYRTGGKYAGVLSTIGV VENVILNITSEEDFIRLCRKRSVFDDNELKTWWNYNKFNRPFIVNFLYIDSFPKPKVNLQRLIELGVIKSINDVPRGFVQ IENVKFEEFLKEARANESYIVD >Mature_502_residues MRILLDTNIIVHREASKVYNQDIGLLFNWLDKMHFEKCVHPLSIEEISTYKDIDVVNTMKVKVENYNVLKTISPDTEGIN QLRLIDKSVNDSNDTSILNELVNNRVNFLITEDKGIHRKAKILGISDKVYKIDAFIEKLVFENPALSDYKVLSVKKEYFG NIDLKDSFFDSFKDDYAEFENWFNSKADKESYICLVENEVKAFLFLKIENTDENYNDIIPPFSSKKRLKIGTFKVTSTGY KLGERFLKVIFDNALVNNVDEIYVTIFDKREEQQRLISLLEEWGFKYWGTKSTKNGVENVYVRDFAKILLDNPRKCFPFV GRRSRIFINPIYPDYHTELFPDSILNNESPQDYIENEPHRNALKKVYISRSYRKDLKPGDIILFYRTGGKYAGVLSTIGV VENVILNITSEEDFIRLCRKRSVFDDNELKTWWNYNKFNRPFIVNFLYIDSFPKPKVNLQRLIELGVIKSINDVPRGFVQ IENVKFEEFLKEARANESYIVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58919; Mature: 58919
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRILLDTNIIVHREASKVYNQDIGLLFNWLDKMHFEKCVHPLSIEEISTYKDIDVVNTMK CEEEEECCEEEEECHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEE VKVENYNVLKTISPDTEGINQLRLIDKSVNDSNDTSILNELVNNRVNFLITEDKGIHRKA EEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEE KILGISDKVYKIDAFIEKLVFENPALSDYKVLSVKKEYFGNIDLKDSFFDSFKDDYAEFE EEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHH NWFNSKADKESYICLVENEVKAFLFLKIENTDENYNDIIPPFSSKKRLKIGTFKVTSTGY HHHCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCHH KLGERFLKVIFDNALVNNVDEIYVTIFDKREEQQRLISLLEEWGFKYWGTKSTKNGVENV HHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHH YVRDFAKILLDNPRKCFPFVGRRSRIFINPIYPDYHTELFPDSILNNESPQDYIENEPHR HHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHCCCCHH NALKKVYISRSYRKDLKPGDIILFYRTGGKYAGVLSTIGVVENVILNITSEEDFIRLCRK HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHH RSVFDDNELKTWWNYNKFNRPFIVNFLYIDSFPKPKVNLQRLIELGVIKSINDVPRGFVQ CCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE IENVKFEEFLKEARANESYIVD EECCCHHHHHHHHCCCCCEECC >Mature Secondary Structure MRILLDTNIIVHREASKVYNQDIGLLFNWLDKMHFEKCVHPLSIEEISTYKDIDVVNTMK CEEEEECCEEEEECHHHHHHCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCEEEEEE VKVENYNVLKTISPDTEGINQLRLIDKSVNDSNDTSILNELVNNRVNFLITEDKGIHRKA EEEECCEEEEECCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCEE KILGISDKVYKIDAFIEKLVFENPALSDYKVLSVKKEYFGNIDLKDSFFDSFKDDYAEFE EEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEHHHCCCCCCCHHHHHHHHHHHHHHH NWFNSKADKESYICLVENEVKAFLFLKIENTDENYNDIIPPFSSKKRLKIGTFKVTSTGY HHHCCCCCCCCEEEEEECCCEEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEEEEECCHH KLGERFLKVIFDNALVNNVDEIYVTIFDKREEQQRLISLLEEWGFKYWGTKSTKNGVENV HHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHHHHHHCCCEECCCCCCCCCHHHH YVRDFAKILLDNPRKCFPFVGRRSRIFINPIYPDYHTELFPDSILNNESPQDYIENEPHR HHHHHHHHHHCCCCHHHHCCCCCCEEEEECCCCCCCCCCCCHHHHCCCCCHHHHCCCCHH NALKKVYISRSYRKDLKPGDIILFYRTGGKYAGVLSTIGVVENVILNITSEEDFIRLCRK HHHHHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHEEECCCHHHHHHHHH RSVFDDNELKTWWNYNKFNRPFIVNFLYIDSFPKPKVNLQRLIELGVIKSINDVPRGFVQ CCCCCCCCCHHHCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCEEE IENVKFEEFLKEARANESYIVD EECCCHHHHHHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA