Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

Click here to switch to the map view.

The map label for this gene is 146301346

Identifier: 146301346

GI number: 146301346

Start: 4300636

End: 4301142

Strand: Direct

Name: 146301346

Synonym: Fjoh_3604

Alternate gene names: NA

Gene position: 4300636-4301142 (Clockwise)

Preceding gene: 146301345

Following gene: 146301347

Centisome position: 70.54

GC content: 29.39

Gene sequence:

>507_bases
ATGTTTAGAAACACATCATTAGGATATGATCATGATCTATTTATCTTTCTACCTGAATTTAGGATTCATATTGCCACAGG
CGGGGCTAAACTACCTGTATATATGTTGAACTTAACGATAAATAACTTTTTGATATACAGCCACTTTGAACAAGAACATC
TTTATAATTTCGAGATCGAAAGAAACAAAAAGCTTGAAGAGATAGTTTATGCTCCTGAACGTCTTTTAAACGAATCATTT
GAAAGTGATGAATATACCAGGACATTTGATAAATTTGCAAAACAAGGATTTTTCTCATTTGACAAGACTAATATAAGTGA
TCCTTATAATAAATCATTTCATCTAGTATCTTTCCCTACAGATAGAAAAAATAGCATACCAAAAGACAATCAATTTTCAG
ATCTAAGAGAAAACAAAGTTTTATTGGATAGAAACGGAATTTTAATTGATCAGATTATAGAAGAAATAAACACATTGAAG
TTTGATCCAAAACCACTGTATTACTAA

Upstream 100 bases:

>100_bases
CGCATAACTAATATTTCGGACATTGAATTTACAAAGGCATACAGGCCTAGAACGATGCAGACCATAAAGAGATGTAATAA
CTGTGTATATATTTTTGGAA

Downstream 100 bases:

>100_bases
ACCCAGATTTTAAGATAACCATAGCACATCTGCTACTTGAAAGACACAATCTGTTTTAATCTTCCCAAAATTTTGTGGCA
TTTTATCCAATAAGGGCTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 168; Mature: 168

Protein sequence:

>168_residues
MFRNTSLGYDHDLFIFLPEFRIHIATGGAKLPVYMLNLTINNFLIYSHFEQEHLYNFEIERNKKLEEIVYAPERLLNESF
ESDEYTRTFDKFAKQGFFSFDKTNISDPYNKSFHLVSFPTDRKNSIPKDNQFSDLRENKVLLDRNGILIDQIIEEINTLK
FDPKPLYY

Sequences:

>Translated_168_residues
MFRNTSLGYDHDLFIFLPEFRIHIATGGAKLPVYMLNLTINNFLIYSHFEQEHLYNFEIERNKKLEEIVYAPERLLNESF
ESDEYTRTFDKFAKQGFFSFDKTNISDPYNKSFHLVSFPTDRKNSIPKDNQFSDLRENKVLLDRNGILIDQIIEEINTLK
FDPKPLYY
>Mature_168_residues
MFRNTSLGYDHDLFIFLPEFRIHIATGGAKLPVYMLNLTINNFLIYSHFEQEHLYNFEIERNKKLEEIVYAPERLLNESF
ESDEYTRTFDKFAKQGFFSFDKTNISDPYNKSFHLVSFPTDRKNSIPKDNQFSDLRENKVLLDRNGILIDQIIEEINTLK
FDPKPLYY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20067; Mature: 20067

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRNTSLGYDHDLFIFLPEFRIHIATGGAKLPVYMLNLTINNFLIYSHFEQEHLYNFEIE
CCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEEEEECEEEEEEECCCCCEEEEEEC
RNKKLEEIVYAPERLLNESFESDEYTRTFDKFAKQGFFSFDKTNISDPYNKSFHLVSFPT
CCCCHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
DRKNSIPKDNQFSDLRENKVLLDRNGILIDQIIEEINTLKFDPKPLYY
CCCCCCCCCCCCCHHHCCEEEEECCCEEHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MFRNTSLGYDHDLFIFLPEFRIHIATGGAKLPVYMLNLTINNFLIYSHFEQEHLYNFEIE
CCCCCCCCCCCEEEEEECCEEEEEEECCCCCEEEEEEEEECEEEEEEECCCCCEEEEEEC
RNKKLEEIVYAPERLLNESFESDEYTRTFDKFAKQGFFSFDKTNISDPYNKSFHLVSFPT
CCCCHHHHHHCHHHHHHCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCC
DRKNSIPKDNQFSDLRENKVLLDRNGILIDQIIEEINTLKFDPKPLYY
CCCCCCCCCCCCCHHHCCEEEEECCCEEHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA