| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146301321
Identifier: 146301321
GI number: 146301321
Start: 4273951
End: 4274313
Strand: Direct
Name: 146301321
Synonym: Fjoh_3579
Alternate gene names: NA
Gene position: 4273951-4274313 (Clockwise)
Preceding gene: 146301320
Following gene: 146301322
Centisome position: 70.1
GC content: 40.77
Gene sequence:
>363_bases ATGTACGCCTTTTCAAAATCAGTATACGCCGAATATCCTGTAAGCAGGGCATTCAATAAAATCATTCTCTCGGATTTGGA ATCTTATGACGGGACTAAAAAGCAGCAGCTCAAATCCTTTTTGGAGGATTTGCAGAGAATGGGATGCATCAGCGGAATGA TAGGAGATTTTATCTATCACGCCGACTGTAAAAATTTCTATATCAAACATCTTGATGATTTGGAAAATATCAGGGAAGAA ATCGAGGATTCCCTTGGCGAAGCGGTGAAAAACCGCCACCGTCTGCCCCACTACACTTTTATGTGCTGGTTATGCTTCGA GGAATACTGTTTTGACATCTACAGAAGCTCTTTTGAGAAATAG
Upstream 100 bases:
>100_bases TAAGCAGAGTAAGGCAGTTTTAAAACAGGATCAAAAAGACCCCGACGACCTGCCTTTCTAAGGTCGGATTTTAAATGTAT AAGCCTAAAAAATAATAGTT
Downstream 100 bases:
>100_bases CCTATAATCCTAAAACATCCCTTATGAAAGGTTCAGAAAAATTCAAAACAAGGATAGAGGGTTTCCTGAAAGGGAAATCG CTCTCGGATGCGGCTTTTGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYHADCKNFYIKHLDDLENIREE IEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK
Sequences:
>Translated_120_residues MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYHADCKNFYIKHLDDLENIREE IEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK >Mature_120_residues MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYHADCKNFYIKHLDDLENIREE IEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14329; Mature: 14329
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 7.5 %Cys+Met (Translated Protein) 4.2 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 7.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYH CCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADCKNFYIKHLDDLENIREEIEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYH CCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADCKNFYIKHLDDLENIREEIEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA