Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301321

Identifier: 146301321

GI number: 146301321

Start: 4273951

End: 4274313

Strand: Direct

Name: 146301321

Synonym: Fjoh_3579

Alternate gene names: NA

Gene position: 4273951-4274313 (Clockwise)

Preceding gene: 146301320

Following gene: 146301322

Centisome position: 70.1

GC content: 40.77

Gene sequence:

>363_bases
ATGTACGCCTTTTCAAAATCAGTATACGCCGAATATCCTGTAAGCAGGGCATTCAATAAAATCATTCTCTCGGATTTGGA
ATCTTATGACGGGACTAAAAAGCAGCAGCTCAAATCCTTTTTGGAGGATTTGCAGAGAATGGGATGCATCAGCGGAATGA
TAGGAGATTTTATCTATCACGCCGACTGTAAAAATTTCTATATCAAACATCTTGATGATTTGGAAAATATCAGGGAAGAA
ATCGAGGATTCCCTTGGCGAAGCGGTGAAAAACCGCCACCGTCTGCCCCACTACACTTTTATGTGCTGGTTATGCTTCGA
GGAATACTGTTTTGACATCTACAGAAGCTCTTTTGAGAAATAG

Upstream 100 bases:

>100_bases
TAAGCAGAGTAAGGCAGTTTTAAAACAGGATCAAAAAGACCCCGACGACCTGCCTTTCTAAGGTCGGATTTTAAATGTAT
AAGCCTAAAAAATAATAGTT

Downstream 100 bases:

>100_bases
CCTATAATCCTAAAACATCCCTTATGAAAGGTTCAGAAAAATTCAAAACAAGGATAGAGGGTTTCCTGAAAGGGAAATCG
CTCTCGGATGCGGCTTTTGC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYHADCKNFYIKHLDDLENIREE
IEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK

Sequences:

>Translated_120_residues
MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYHADCKNFYIKHLDDLENIREE
IEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK
>Mature_120_residues
MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYHADCKNFYIKHLDDLENIREE
IEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14329; Mature: 14329

Theoretical pI: Translated: 5.22; Mature: 5.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.2 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
4.2 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYH
CCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADCKNFYIKHLDDLENIREEIEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYAFSKSVYAEYPVSRAFNKIILSDLESYDGTKKQQLKSFLEDLQRMGCISGMIGDFIYH
CCCCCCHHHHHCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ADCKNFYIKHLDDLENIREEIEDSLGEAVKNRHRLPHYTFMCWLCFEEYCFDIYRSSFEK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA