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The map label for this gene is yiiX [H]

Identifier: 146301257

GI number: 146301257

Start: 4189022

End: 4189699

Strand: Direct

Name: yiiX [H]

Synonym: Fjoh_3515

Alternate gene names: 146301257

Gene position: 4189022-4189699 (Clockwise)

Preceding gene: 146301256

Following gene: 146301258

Centisome position: 68.71

GC content: 33.04

Gene sequence:

>678_bases
ATGAAAAAGCAAAAATACATTTTCCTAATCATCACATTTGTGCTAAGCTTTGGTTTGGCATTATTTGTCGCAGTGAAGGT
TTTCCCAAACAATCCATTTTCAAAAAAGAAAACTGAAAATATTCAATCTGATAAAATTAAAAGCGGTGATATTGTATTTC
AAACCTCACAGTCTCCTCAATGCGAAGCCGTTCGAATTGCTACTAATTCTAAATTCTCGCATTGCGGTATTATTTTTGAC
CTCAACGGAAAATGGTTTGTTTTTGAAGCTGTACAGCCTGTAAAACTTACTCCTTTTGACGAATGGATCCAGCACGGAAA
AAATAATAAATATGTCGTAAAGAGATTAAAAAATGCTGAAACCGTTTTGACTCCGGAAGTACTTCAAAAAATGGAAAATT
ACGGCCAGCAGTTTGACGGAAAAGAATATGATGCTTATTTTGAATGGACTGATAATAGAATTTATTGTTCTGAATTGGTT
TGGAAAATTTATAAAAATGCGGCAGGGATTGAACTATCAAAACTAAGAGAATTGAAAGATTTTAATTTAGAAGATCCGAG
AGTCAAAAAAATTCTTAAAGAGCGTTATGGCAATGATATTCCGCTTGAAGAAAAAGTTGTCGCTCCCTCTGACCTAGCGG
ATTCAAATTTATTAAAAACCGTAATAGACAATTATTAA

Upstream 100 bases:

>100_bases
TCAGTTAGAAAATATATTAAAAATAGTTATCATTAATTTGGTAACTATTTTTTTTATTATTTACTTTGCAACTCAAAGTA
CTTTAATATTTATTTGAAAT

Downstream 100 bases:

>100_bases
GAAATAAGTTAAAAGCTAATTCTAAACCCGATTAGCTTTTTATTTTAACTATTTACTTTGAATTTCAAAGAACTTTTAAC
CAGCACAACTATGAGAGATT

Product: putative peptidoglycan peptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MKKQKYIFLIITFVLSFGLALFVAVKVFPNNPFSKKKTENIQSDKIKSGDIVFQTSQSPQCEAVRIATNSKFSHCGIIFD
LNGKWFVFEAVQPVKLTPFDEWIQHGKNNKYVVKRLKNAETVLTPEVLQKMENYGQQFDGKEYDAYFEWTDNRIYCSELV
WKIYKNAAGIELSKLRELKDFNLEDPRVKKILKERYGNDIPLEEKVVAPSDLADSNLLKTVIDNY

Sequences:

>Translated_225_residues
MKKQKYIFLIITFVLSFGLALFVAVKVFPNNPFSKKKTENIQSDKIKSGDIVFQTSQSPQCEAVRIATNSKFSHCGIIFD
LNGKWFVFEAVQPVKLTPFDEWIQHGKNNKYVVKRLKNAETVLTPEVLQKMENYGQQFDGKEYDAYFEWTDNRIYCSELV
WKIYKNAAGIELSKLRELKDFNLEDPRVKKILKERYGNDIPLEEKVVAPSDLADSNLLKTVIDNY
>Mature_225_residues
MKKQKYIFLIITFVLSFGLALFVAVKVFPNNPFSKKKTENIQSDKIKSGDIVFQTSQSPQCEAVRIATNSKFSHCGIIFD
LNGKWFVFEAVQPVKLTPFDEWIQHGKNNKYVVKRLKNAETVLTPEVLQKMENYGQQFDGKEYDAYFEWTDNRIYCSELV
WKIYKNAAGIELSKLRELKDFNLEDPRVKKILKERYGNDIPLEEKVVAPSDLADSNLLKTVIDNY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To E.coli yebB [H]

Homologues:

Organism=Escherichia coli, GI1790372, Length=179, Percent_Identity=45.8100558659218, Blast_Score=177, Evalue=8e-46,
Organism=Escherichia coli, GI87081991, Length=167, Percent_Identity=28.7425149700599, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26107; Mature: 26107

Theoretical pI: Translated: 8.98; Mature: 8.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKQKYIFLIITFVLSFGLALFVAVKVFPNNPFSKKKTENIQSDKIKSGDIVFQTSQSPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCC
CEAVRIATNSKFSHCGIIFDLNGKWFVFEAVQPVKLTPFDEWIQHGKNNKYVVKRLKNAE
CCEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEECCHHHHHHCCCCCHHHHHHHCCCC
TVLTPEVLQKMENYGQQFDGKEYDAYFEWTDNRIYCSELVWKIYKNAAGIELSKLRELKD
CEECHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEHHHHHHHHHHCCCCCCHHHHHHHHC
FNLEDPRVKKILKERYGNDIPLEEKVVAPSDLADSNLLKTVIDNY
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MKKQKYIFLIITFVLSFGLALFVAVKVFPNNPFSKKKTENIQSDKIKSGDIVFQTSQSPQ
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCCCCCCCCCCCEEEECCCCCC
CEAVRIATNSKFSHCGIIFDLNGKWFVFEAVQPVKLTPFDEWIQHGKNNKYVVKRLKNAE
CCEEEEECCCCCCEEEEEEECCCCEEEEECCCCEEECCHHHHHHCCCCCHHHHHHHCCCC
TVLTPEVLQKMENYGQQFDGKEYDAYFEWTDNRIYCSELVWKIYKNAAGIELSKLRELKD
CEECHHHHHHHHHHHHCCCCCCCCEEEEEECCEEEHHHHHHHHHHCCCCCCHHHHHHHHC
FNLEDPRVKKILKERYGNDIPLEEKVVAPSDLADSNLLKTVIDNY
CCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8346018; 9278503; 7868617 [H]