Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146301003

Identifier: 146301003

GI number: 146301003

Start: 3898194

End: 3899840

Strand: Reverse

Name: 146301003

Synonym: Fjoh_3259

Alternate gene names: NA

Gene position: 3899840-3898194 (Counterclockwise)

Preceding gene: 146301004

Following gene: 146301002

Centisome position: 63.96

GC content: 32.0

Gene sequence:

>1647_bases
ATGAGCAGGGTTAGATTAGTTGGAGGTACTATAACAAAAACTACAGGCGGCGATCACAATATATATTCTGATGGTAATAT
TGTGTATAATTCTGGTAAAGTTGTTACCGAAACAAGTGATGCAGGGATTACTTACGGAGAACCTAAAAGTTCTCCACCTG
TTTCAAAATTACATTTCGTTGACGGCTGGTGGGCTTTGGATAGAGAAGGACAGAAAAAAATAAAAAGAGCAGTACCAGGT
ATGACAGTTTTTTTTCATTTAAAAACTAAAGAAATCCCTAATGGTAATGCAGTATTTTTATCCTTGTTTGATGAAGACAA
TCATGAAAAAGAAGAAGGTCCAAATAAAGATGGCAGGAAAGATAAAGATGATGCGATTAAATTAATTAATACAAAATCAA
AAAAACAAGTTCTTGTTGCCAAAGTAACAGATAATAAAATAGTACAAGAAATAAACTTAACAGGTTTAGGATCATTAATT
GCTGAAGAACAGGATAAATGTTTAGAACTTTATTTTCGCTGCAGTTATAAAAGTGAAAATGTTCAATATCCAGCAGACAG
GAAAAATTATCTGGAAGTAGGTTCCATAGTCATTGACCGCTACAAAATGCCTGGATTAAACAGTGATGGCTCAAAGATTG
CTGACGATATGACCTACGGAAAAGGTGTAAAGCATATTGGAGAAGTATATTCTAAGGATGTCCTTGAAAAATTTAAAAAA
GAGTATGAAGAGGGAGGTTTTGATAATCAAAAGCATGCCTCTTTTTCACATCAGGACAATGTCGAAAATAAAGCCAAATA
CAGCAAAGAGGAATGCTATAAGACTAGTTACAAAGTTAACATTCCAATTATAAAGAAATTAATTCCGGAAATTTCAACAG
GTTTAGATGTACGATTATTTGATAAACTTTCTACAGAGAGTTTGTTTTGGGATTTTGAGCAGACAGCAACTTTATATTTT
GCTTCTGGCGAGTTACAAGGAAATATTGAGCGTATGATTGCTAAATTCAAAAAAAATGAAGGTGGTGTTTATGAAGATAG
AATATTAACTAAATATGTAAGTGATAATCCGAATACAAAAAAATATTGTATGAATGTTGAGGATTATATTGCAGAACAGT
TAAAGCAAAATGTGGCAGATTTGAAAAAAGCAGAAGATGCTAAACCTTATTTCGGAAGTCCTGAAACCATAACGAGAAAT
CGAAAAACGAAGAATAAAGAGTATTTTACTAAACCAATGTATTCTTATGACAATTTAAGTAATGTAACAGGTGGTTTAAC
TATTGCTTTAAATGATATTTGGGCTGCAGAAGTACTTTTACAAGAATTAAAATTTGATAAAGACAACTATACAGGAAAAT
ATCAAGTAACTCTATGGGATCATTTTGGACTTGATTTACCCGATATGGAAAAAGTTTTTAATATTATACCAAGTGTTGGA
GAAACTTTTGTAACATGGTTTGTTTTACAGCATTTAAGAGGATACAAGCCTTTTATCACTAAAATGACTTTCGAAAGAAC
ATTTTCAGGTAATATTAAAGAAGGTAAAAAAGAAAGAACAGACAAAAGAAAATCTGAAGAACGTGCAAAAGCACAAAAAT
GGGCAGAGGAAGAACGAGCAAAAATGATGAGGGGGCCAAAATTTTAA

Upstream 100 bases:

>100_bases
AGTTAAAGGAATTGATACAAGCAGTGAAGGAGGGATAAATAAACACTCTAAAAAAGAAATGCAAATTAACAGCGCCGAAA
AATCTAAATCTTACTAATGT

Downstream 100 bases:

>100_bases
AAAAGAATGAAAAAACTATTTTTTTTAATAATCATAACAGCATTTTTATCTTCTTGCCATGAGAAGAAAGTTACGTTTGT
AAATTTAGAAAAACACAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 548; Mature: 547

Protein sequence:

>548_residues
MSRVRLVGGTITKTTGGDHNIYSDGNIVYNSGKVVTETSDAGITYGEPKSSPPVSKLHFVDGWWALDREGQKKIKRAVPG
MTVFFHLKTKEIPNGNAVFLSLFDEDNHEKEEGPNKDGRKDKDDAIKLINTKSKKQVLVAKVTDNKIVQEINLTGLGSLI
AEEQDKCLELYFRCSYKSENVQYPADRKNYLEVGSIVIDRYKMPGLNSDGSKIADDMTYGKGVKHIGEVYSKDVLEKFKK
EYEEGGFDNQKHASFSHQDNVENKAKYSKEECYKTSYKVNIPIIKKLIPEISTGLDVRLFDKLSTESLFWDFEQTATLYF
ASGELQGNIERMIAKFKKNEGGVYEDRILTKYVSDNPNTKKYCMNVEDYIAEQLKQNVADLKKAEDAKPYFGSPETITRN
RKTKNKEYFTKPMYSYDNLSNVTGGLTIALNDIWAAEVLLQELKFDKDNYTGKYQVTLWDHFGLDLPDMEKVFNIIPSVG
ETFVTWFVLQHLRGYKPFITKMTFERTFSGNIKEGKKERTDKRKSEERAKAQKWAEEERAKMMRGPKF

Sequences:

>Translated_548_residues
MSRVRLVGGTITKTTGGDHNIYSDGNIVYNSGKVVTETSDAGITYGEPKSSPPVSKLHFVDGWWALDREGQKKIKRAVPG
MTVFFHLKTKEIPNGNAVFLSLFDEDNHEKEEGPNKDGRKDKDDAIKLINTKSKKQVLVAKVTDNKIVQEINLTGLGSLI
AEEQDKCLELYFRCSYKSENVQYPADRKNYLEVGSIVIDRYKMPGLNSDGSKIADDMTYGKGVKHIGEVYSKDVLEKFKK
EYEEGGFDNQKHASFSHQDNVENKAKYSKEECYKTSYKVNIPIIKKLIPEISTGLDVRLFDKLSTESLFWDFEQTATLYF
ASGELQGNIERMIAKFKKNEGGVYEDRILTKYVSDNPNTKKYCMNVEDYIAEQLKQNVADLKKAEDAKPYFGSPETITRN
RKTKNKEYFTKPMYSYDNLSNVTGGLTIALNDIWAAEVLLQELKFDKDNYTGKYQVTLWDHFGLDLPDMEKVFNIIPSVG
ETFVTWFVLQHLRGYKPFITKMTFERTFSGNIKEGKKERTDKRKSEERAKAQKWAEEERAKMMRGPKF
>Mature_547_residues
SRVRLVGGTITKTTGGDHNIYSDGNIVYNSGKVVTETSDAGITYGEPKSSPPVSKLHFVDGWWALDREGQKKIKRAVPGM
TVFFHLKTKEIPNGNAVFLSLFDEDNHEKEEGPNKDGRKDKDDAIKLINTKSKKQVLVAKVTDNKIVQEINLTGLGSLIA
EEQDKCLELYFRCSYKSENVQYPADRKNYLEVGSIVIDRYKMPGLNSDGSKIADDMTYGKGVKHIGEVYSKDVLEKFKKE
YEEGGFDNQKHASFSHQDNVENKAKYSKEECYKTSYKVNIPIIKKLIPEISTGLDVRLFDKLSTESLFWDFEQTATLYFA
SGELQGNIERMIAKFKKNEGGVYEDRILTKYVSDNPNTKKYCMNVEDYIAEQLKQNVADLKKAEDAKPYFGSPETITRNR
KTKNKEYFTKPMYSYDNLSNVTGGLTIALNDIWAAEVLLQELKFDKDNYTGKYQVTLWDHFGLDLPDMEKVFNIIPSVGE
TFVTWFVLQHLRGYKPFITKMTFERTFSGNIKEGKKERTDKRKSEERAKAQKWAEEERAKMMRGPKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62783; Mature: 62652

Theoretical pI: Translated: 8.78; Mature: 8.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRVRLVGGTITKTTGGDHNIYSDGNIVYNSGKVVTETSDAGITYGEPKSSPPVSKLHFV
CCCEEEECCEEEECCCCCCCEECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEE
DGWWALDREGQKKIKRAVPGMTVFFHLKTKEIPNGNAVFLSLFDEDNHEKEEGPNKDGRK
CCEEEECCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCHHCCCCCCCCC
DKDDAIKLINTKSKKQVLVAKVTDNKIVQEINLTGLGSLIAEEQDKCLELYFRCSYKSEN
CHHHHHHHHCCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCC
VQYPADRKNYLEVGSIVIDRYKMPGLNSDGSKIADDMTYGKGVKHIGEVYSKDVLEKFKK
CCCCCCCCHHHHHHHHHEEHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYEEGGFDNQKHASFSHQDNVENKAKYSKEECYKTSYKVNIPIIKKLIPEISTGLDVRLF
HHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHCCEEECCHHHHHHHHHHHCCCCEEEH
DKLSTESLFWDFEQTATLYFASGELQGNIERMIAKFKKNEGGVYEDRILTKYVSDNPNTK
HHCCCHHHEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
KYCMNVEDYIAEQLKQNVADLKKAEDAKPYFGSPETITRNRKTKNKEYFTKPMYSYDNLS
HEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCC
NVTGGLTIALNDIWAAEVLLQELKFDKDNYTGKYQVTLWDHFGLDLPDMEKVFNIIPSVG
CCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
ETFVTWFVLQHLRGYKPFITKMTFERTFSGNIKEGKKERTDKRKSEERAKAQKWAEEERA
HHHHHHHHHHHHCCCCHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KMMRGPKF
HHHCCCCC
>Mature Secondary Structure 
SRVRLVGGTITKTTGGDHNIYSDGNIVYNSGKVVTETSDAGITYGEPKSSPPVSKLHFV
CCEEEECCEEEECCCCCCCEECCCCEEEECCEEEEECCCCCCCCCCCCCCCCCCEEEEE
DGWWALDREGQKKIKRAVPGMTVFFHLKTKEIPNGNAVFLSLFDEDNHEKEEGPNKDGRK
CCEEEECCHHHHHHHHHCCCEEEEEEEEECCCCCCCEEEEEEECCCCCCHHCCCCCCCCC
DKDDAIKLINTKSKKQVLVAKVTDNKIVQEINLTGLGSLIAEEQDKCLELYFRCSYKSEN
CHHHHHHHHCCCCCCEEEEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHEECCCCCC
VQYPADRKNYLEVGSIVIDRYKMPGLNSDGSKIADDMTYGKGVKHIGEVYSKDVLEKFKK
CCCCCCCCHHHHHHHHHEEHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EYEEGGFDNQKHASFSHQDNVENKAKYSKEECYKTSYKVNIPIIKKLIPEISTGLDVRLF
HHHHCCCCCCCCCCCCCCCCCHHHHHHCHHHHHHCCEEECCHHHHHHHHHHHCCCCEEEH
DKLSTESLFWDFEQTATLYFASGELQGNIERMIAKFKKNEGGVYEDRILTKYVSDNPNTK
HHCCCHHHEEECCCCEEEEEECCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCH
KYCMNVEDYIAEQLKQNVADLKKAEDAKPYFGSPETITRNRKTKNKEYFTKPMYSYDNLS
HEECCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCCCCCHHHCCCCCCCCCCC
NVTGGLTIALNDIWAAEVLLQELKFDKDNYTGKYQVTLWDHFGLDLPDMEKVFNIIPSVG
CCCCCEEEEECHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHH
ETFVTWFVLQHLRGYKPFITKMTFERTFSGNIKEGKKERTDKRKSEERAKAQKWAEEERA
HHHHHHHHHHHHCCCCHHHHHEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
KMMRGPKF
HHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA