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The map label for this gene is 146300994

Identifier: 146300994

GI number: 146300994

Start: 3885532

End: 3887067

Strand: Reverse

Name: 146300994

Synonym: Fjoh_3250

Alternate gene names: NA

Gene position: 3887067-3885532 (Counterclockwise)

Preceding gene: 146300995

Following gene: 146300993

Centisome position: 63.76

GC content: 38.93

Gene sequence:

>1536_bases
ATGAAAAAAATAAGTCTTTTATTATTGAGTTTTACGCTTTTAGTCGGCACAACGGCTTGCGAAAGCGAACTTGATGTTGT
ACCGCAGGGAGCACCTTCGAGCGGGAATTTCTGGAAAACTCCGGCAGACGCAAAGGCTGGTGTAAATTCAATTTACGCTT
TGTATTCTGATGATAATATGTACGGCCGCGGTTTCTTTTGGCTGAACAATGCCAGCGATGACATCGGAACAAAACCAAGA
CAAAACGCAGAACGTATTAAAAACTTTATTGTTGATGGTGCAGAATCAGATACCAAAGATATCTGGAGAATTCACTACGA
AATCATGAAACGATGCAACGACGTAATTCGTAACATTCCAAATATTCCTTTAGATGAAAAAACTAAAAACGGAATGTTGG
GCGAAGCTTATTTCAATCATGCAGTAATGCATTTAGAATTGGCTTACCATTATGGAGACGATCGCGCGGGAATTCCAATT
CAGGACAGAGAAAACCCAACAAACGTTTACGTGCCGCGTGCTAAAAACGTTGCAGAAAACTACGCATATATCGCTGCCGA
TTTAATTAAAGCAGCTGATTTACTGCCTTATTTTAATGAACTTTCGGCAGATAATTACGGGCGCGCTCATAAAACTGCCG
CATGGGCTTATTTAGTTCGTACGTATTTGTATGCAAAAGACTGGGACAATGCTATAAAATATGCCAATATGATTGTAGCA
AGCGGTAAACACAAACTGCTTGATAATTATGAAGATGTATTTAAAATTAAAAACAACTGGTCTACAGAATATATCTGGTC
TGTAACATCAAGTGCCGAAAATACCTCTTTGGGTTCTATTTTTCCGGGAGTTTGTTTAGAAGATAAAGGCTGGGGAGTTT
ACAATGGCTGGGGAAATTTTTATCCAACAAAAGAATTGTTTGATACCTATGATCCAACTGATAAAAGAAGAAGCGCTACA
ATACTTCAAAAAGGCGATAAGTTTGTTTATTTTGGAGAAGAAGTAACTTTTAACGAAGGTGCTCATATTGTAAGCTCAAG
TAACAGAACAGGTTATCAGTTTAAAAAATACATGGAGCCGTTTAGTTATCCAAAAACGACTTCAGGAGGAATTGATATTC
GTTATGTAAATGCCAACGGAGATAAACCTTCAACAGCTTTAAACGTACCGCTTTTACGTTATGCCGATGTAATTTTAATG
CTGGCTGAGGCAAAATTAATGAAAGGACAAAATGCCGATACTGAAATCAATATGATTCGTCACCGTGCTGGTCTTGGAGA
TCTTTCTGGAGCAACCATGACCGATTTAAAAAGAGAAAGAAGATGTGAGCTGGCAGGTGAGTGGACTGATCGTCATTTTG
ATTTAGTGAGATGGGGAGATGCTAAAGAAACTTACGCAAAACCATTGCACCATTATGACGGAAGTGTAATTTATCCGGCA
CGTAATTTCAACCCTGCAATTCACCATGTTTGGCCAATACCGCCAGATGAAATTGCAGTAAGCAAAGGCGCTTTGACTCA
AAACCAAGGCTGGTAA

Upstream 100 bases:

>100_bases
GGACTTAAAAACTTTGGAATGGATTTAGGCAGATATCCGCTTTCACGTATTTATATGACAGGTGTTAACGCAACTTTTTA
AAAAATAAAAACAACACACA

Downstream 100 bases:

>100_bases
TTAAGCAAAAGTAGTTTAGTTTGTTGTTTATTTTTTTTTACGCTGCAGACTTGTTGTGGAGTCTGCAGGCAGTAAAAAAA
TATTACAGCATTTAATATCA

Product: RagB/SusD domain-containing protein

Products: NA

Alternate protein names: RagB/SusD Domain-Containing Protein; Ragb/Susd Domain Protein; Outer Membrane Protein; SusD/RagB Family Protein; Lipoprotein; RagB/SusD Family Protein; SusD Outer Membrane Protein

Number of amino acids: Translated: 511; Mature: 511

Protein sequence:

>511_residues
MKKISLLLLSFTLLVGTTACESELDVVPQGAPSSGNFWKTPADAKAGVNSIYALYSDDNMYGRGFFWLNNASDDIGTKPR
QNAERIKNFIVDGAESDTKDIWRIHYEIMKRCNDVIRNIPNIPLDEKTKNGMLGEAYFNHAVMHLELAYHYGDDRAGIPI
QDRENPTNVYVPRAKNVAENYAYIAADLIKAADLLPYFNELSADNYGRAHKTAAWAYLVRTYLYAKDWDNAIKYANMIVA
SGKHKLLDNYEDVFKIKNNWSTEYIWSVTSSAENTSLGSIFPGVCLEDKGWGVYNGWGNFYPTKELFDTYDPTDKRRSAT
ILQKGDKFVYFGEEVTFNEGAHIVSSSNRTGYQFKKYMEPFSYPKTTSGGIDIRYVNANGDKPSTALNVPLLRYADVILM
LAEAKLMKGQNADTEINMIRHRAGLGDLSGATMTDLKRERRCELAGEWTDRHFDLVRWGDAKETYAKPLHHYDGSVIYPA
RNFNPAIHHVWPIPPDEIAVSKGALTQNQGW

Sequences:

>Translated_511_residues
MKKISLLLLSFTLLVGTTACESELDVVPQGAPSSGNFWKTPADAKAGVNSIYALYSDDNMYGRGFFWLNNASDDIGTKPR
QNAERIKNFIVDGAESDTKDIWRIHYEIMKRCNDVIRNIPNIPLDEKTKNGMLGEAYFNHAVMHLELAYHYGDDRAGIPI
QDRENPTNVYVPRAKNVAENYAYIAADLIKAADLLPYFNELSADNYGRAHKTAAWAYLVRTYLYAKDWDNAIKYANMIVA
SGKHKLLDNYEDVFKIKNNWSTEYIWSVTSSAENTSLGSIFPGVCLEDKGWGVYNGWGNFYPTKELFDTYDPTDKRRSAT
ILQKGDKFVYFGEEVTFNEGAHIVSSSNRTGYQFKKYMEPFSYPKTTSGGIDIRYVNANGDKPSTALNVPLLRYADVILM
LAEAKLMKGQNADTEINMIRHRAGLGDLSGATMTDLKRERRCELAGEWTDRHFDLVRWGDAKETYAKPLHHYDGSVIYPA
RNFNPAIHHVWPIPPDEIAVSKGALTQNQGW
>Mature_511_residues
MKKISLLLLSFTLLVGTTACESELDVVPQGAPSSGNFWKTPADAKAGVNSIYALYSDDNMYGRGFFWLNNASDDIGTKPR
QNAERIKNFIVDGAESDTKDIWRIHYEIMKRCNDVIRNIPNIPLDEKTKNGMLGEAYFNHAVMHLELAYHYGDDRAGIPI
QDRENPTNVYVPRAKNVAENYAYIAADLIKAADLLPYFNELSADNYGRAHKTAAWAYLVRTYLYAKDWDNAIKYANMIVA
SGKHKLLDNYEDVFKIKNNWSTEYIWSVTSSAENTSLGSIFPGVCLEDKGWGVYNGWGNFYPTKELFDTYDPTDKRRSAT
ILQKGDKFVYFGEEVTFNEGAHIVSSSNRTGYQFKKYMEPFSYPKTTSGGIDIRYVNANGDKPSTALNVPLLRYADVILM
LAEAKLMKGQNADTEINMIRHRAGLGDLSGATMTDLKRERRCELAGEWTDRHFDLVRWGDAKETYAKPLHHYDGSVIYPA
RNFNPAIHHVWPIPPDEIAVSKGALTQNQGW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57802; Mature: 57802

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKISLLLLSFTLLVGTTACESELDVVPQGAPSSGNFWKTPADAKAGVNSIYALYSDDNM
CCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCE
YGRGFFWLNNASDDIGTKPRQNAERIKNFIVDGAESDTKDIWRIHYEIMKRCNDVIRNIP
EECEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NIPLDEKTKNGMLGEAYFNHAVMHLELAYHYGDDRAGIPIQDRENPTNVYVPRAKNVAEN
CCCCCCCCCCCCCHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHH
YAYIAADLIKAADLLPYFNELSADNYGRAHKTAAWAYLVRTYLYAKDWDNAIKYANMIVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEE
SGKHKLLDNYEDVFKIKNNWSTEYIWSVTSSAENTSLGSIFPGVCLEDKGWGVYNGWGNF
CCCHHHHCCHHHHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCEEECCCCCC
YPTKELFDTYDPTDKRRSATILQKGDKFVYFGEEVTFNEGAHIVSSSNRTGYQFKKYMEP
CCCHHHHCCCCCCCHHHHHHHHHCCCEEEEECCEEEECCCCEEEECCCCCCHHHHHHHCC
FSYPKTTSGGIDIRYVNANGDKPSTALNVPLLRYADVILMLAEAKLMKGQNADTEINMIR
CCCCCCCCCCEEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
HRAGLGDLSGATMTDLKRERRCELAGEWTDRHFDLVRWGDAKETYAKPLHHYDGSVIYPA
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEC
RNFNPAIHHVWPIPPDEIAVSKGALTQNQGW
CCCCCCEEEECCCCHHHHEECCCCCCCCCCC
>Mature Secondary Structure
MKKISLLLLSFTLLVGTTACESELDVVPQGAPSSGNFWKTPADAKAGVNSIYALYSDDNM
CCHHHHHHHHHHHHHCCHHCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEEEEECCCE
YGRGFFWLNNASDDIGTKPRQNAERIKNFIVDGAESDTKDIWRIHYEIMKRCNDVIRNIP
EECEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
NIPLDEKTKNGMLGEAYFNHAVMHLELAYHYGDDRAGIPIQDRENPTNVYVPRAKNVAEN
CCCCCCCCCCCCCHHHHHCCEEEEEEEEEEECCCCCCCCCCCCCCCCEEEECCCHHHHHH
YAYIAADLIKAADLLPYFNELSADNYGRAHKTAAWAYLVRTYLYAKDWDNAIKYANMIVA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHEE
SGKHKLLDNYEDVFKIKNNWSTEYIWSVTSSAENTSLGSIFPGVCLEDKGWGVYNGWGNF
CCCHHHHCCHHHHHEECCCCCCEEEEEEECCCCCCCCCCCCCCCEECCCCCEEECCCCCC
YPTKELFDTYDPTDKRRSATILQKGDKFVYFGEEVTFNEGAHIVSSSNRTGYQFKKYMEP
CCCHHHHCCCCCCCHHHHHHHHHCCCEEEEECCEEEECCCCEEEECCCCCCHHHHHHHCC
FSYPKTTSGGIDIRYVNANGDKPSTALNVPLLRYADVILMLAEAKLMKGQNADTEINMIR
CCCCCCCCCCEEEEEEECCCCCCCCEECCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHH
HRAGLGDLSGATMTDLKRERRCELAGEWTDRHFDLVRWGDAKETYAKPLHHYDGSVIYPA
HHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCEEEEC
RNFNPAIHHVWPIPPDEIAVSKGALTQNQGW
CCCCCCEEEECCCCHHHHEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA