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The map label for this gene is 146300989

Identifier: 146300989

GI number: 146300989

Start: 3866056

End: 3867180

Strand: Reverse

Name: 146300989

Synonym: Fjoh_3245

Alternate gene names: NA

Gene position: 3867180-3866056 (Counterclockwise)

Preceding gene: 146300990

Following gene: 146300985

Centisome position: 63.43

GC content: 37.78

Gene sequence:

>1125_bases
ATGAGTAAAATTATTATTTTAACAGTTGACGGAGGCGGTATAAAAGGAATTATACCTTCTTATTTTCTTTCGCAGATAGA
AGCAGCGCTGAATAAATCATGTTATGAAATGTTTGATATAATAGGAGGTACATCGACAGGAGGTATTATTGCCACTGCTT
TATCTTCTCCGGTAAATAACAAATTACCATTAACAGCAAGTGAAATCTACGAAATTTACACAAACGACGGCTCTCAGATT
TTTGTTTCTCAACCGTCAATTGTACCAGATTATTATTCTTTGTATTATGCCAATGATGGAAACGGAAATGGAGTAGAACC
CTTTTTACAGCAGAAATACGGAAACTATACTTTGAATGATGCCAAACAAAACATGGCAGCTTTAGAAAATGCAAGAACAA
AACATGTTTTTACAACTAGTTATACTATTAACAGCAGCGGTAACAGTATTCAAAATCCAACTCTGGGACAAGATTACGGT
CCTTATTTGTTCAATTGGTATGATGCGGCAAATCCAGGAGATGATTATCAGGTATGGGAAGCAGCAAGAGCAACAAGTGC
AGCACCAACTTATTTTCCAGTTGGGAAATTAGGCGGAGGAAGCGCTCCAAATTCTAATGCCAGCGAAAGATGGGCTCTTG
ATGGCGGTGTAATGTCAAATAATCCTGCAGTTTGGGCAGTGAGCGAAGCTTTTAGAACAAAATTAGCTTCTTCATTAGAT
GATATAATTCTAATATCTTTAGGAACAGGTTCTTACCCAAGCGGAGCCGGATTGGTTACAAATCATCAGGGACTTCCTGA
TCCTGATTACGGAAATTGGGGTTTTACACCATGGCTTGCGAGCGATTTAGATGATTTATCGGGAACAGAAAACGGACGTG
GTGCTATTGTCAATATCATTACAGAATCGGTTCAATTGGTTTCGAGCCAGCAATTATCCGGATTTCAAAAAGGCGGACTT
ACGTATTTTAGATTAGAACCTTCTATTACAAGAGAGCAATCCAAAATGGACAATATAGCGCAGTCAAATGTGGATTCGCT
GATTGATACAGCAGCAAATTTTTTAAGCGGAGAAGGAAGCGATATTTTTCTCGATATTGTAAACGTATTAAAACAGAATA
CTTAA

Upstream 100 bases:

>100_bases
AAAAATAACCGTTAGATGACAATTTAATTCTTCGCAGCACTCAGGTTCTATAAATTTATTGTGCAAAAAGACCTAATACA
AACTACTAAATCAAAGAGTT

Downstream 100 bases:

>100_bases
AATTAGAATAAACCAACATCCAAAAAAAAGAGTCTTGCAAAATTACTTTGAAAGACTCTTTTTTAATTTTTAGAATAGAA
CTTTAAATTGTTTCGATATG

Product: patatin

Products: NA

Alternate protein names: Patatin Family Protein; Patatin-Like Phospholipase Family

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MSKIIILTVDGGGIKGIIPSYFLSQIEAALNKSCYEMFDIIGGTSTGGIIATALSSPVNNKLPLTASEIYEIYTNDGSQI
FVSQPSIVPDYYSLYYANDGNGNGVEPFLQQKYGNYTLNDAKQNMAALENARTKHVFTTSYTINSSGNSIQNPTLGQDYG
PYLFNWYDAANPGDDYQVWEAARATSAAPTYFPVGKLGGGSAPNSNASERWALDGGVMSNNPAVWAVSEAFRTKLASSLD
DIILISLGTGSYPSGAGLVTNHQGLPDPDYGNWGFTPWLASDLDDLSGTENGRGAIVNIITESVQLVSSQQLSGFQKGGL
TYFRLEPSITREQSKMDNIAQSNVDSLIDTAANFLSGEGSDIFLDIVNVLKQNT

Sequences:

>Translated_374_residues
MSKIIILTVDGGGIKGIIPSYFLSQIEAALNKSCYEMFDIIGGTSTGGIIATALSSPVNNKLPLTASEIYEIYTNDGSQI
FVSQPSIVPDYYSLYYANDGNGNGVEPFLQQKYGNYTLNDAKQNMAALENARTKHVFTTSYTINSSGNSIQNPTLGQDYG
PYLFNWYDAANPGDDYQVWEAARATSAAPTYFPVGKLGGGSAPNSNASERWALDGGVMSNNPAVWAVSEAFRTKLASSLD
DIILISLGTGSYPSGAGLVTNHQGLPDPDYGNWGFTPWLASDLDDLSGTENGRGAIVNIITESVQLVSSQQLSGFQKGGL
TYFRLEPSITREQSKMDNIAQSNVDSLIDTAANFLSGEGSDIFLDIVNVLKQNT
>Mature_373_residues
SKIIILTVDGGGIKGIIPSYFLSQIEAALNKSCYEMFDIIGGTSTGGIIATALSSPVNNKLPLTASEIYEIYTNDGSQIF
VSQPSIVPDYYSLYYANDGNGNGVEPFLQQKYGNYTLNDAKQNMAALENARTKHVFTTSYTINSSGNSIQNPTLGQDYGP
YLFNWYDAANPGDDYQVWEAARATSAAPTYFPVGKLGGGSAPNSNASERWALDGGVMSNNPAVWAVSEAFRTKLASSLDD
IILISLGTGSYPSGAGLVTNHQGLPDPDYGNWGFTPWLASDLDDLSGTENGRGAIVNIITESVQLVSSQQLSGFQKGGLT
YFRLEPSITREQSKMDNIAQSNVDSLIDTAANFLSGEGSDIFLDIVNVLKQNT

Specific function: Unknown

COG id: COG3621

COG function: function code R; Patatin

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Caenorhabditis elegans, GI17551040, Length=262, Percent_Identity=29.0076335877863, Blast_Score=78, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17544092, Length=363, Percent_Identity=26.1707988980716, Blast_Score=75, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40088; Mature: 39956

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKIIILTVDGGGIKGIIPSYFLSQIEAALNKSCYEMFDIIGGTSTGGIIATALSSPVNN
CCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
KLPLTASEIYEIYTNDGSQIFVSQPSIVPDYYSLYYANDGNGNGVEPFLQQKYGNYTLND
CCCCCHHHHEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEECH
AKQNMAALENARTKHVFTTSYTINSSGNSIQNPTLGQDYGPYLFNWYDAANPGDDYQVWE
HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH
AARATSAAPTYFPVGKLGGGSAPNSNASERWALDGGVMSNNPAVWAVSEAFRTKLASSLD
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEHHHHHHHHHHCCC
DIILISLGTGSYPSGAGLVTNHQGLPDPDYGNWGFTPWLASDLDDLSGTENGRGAIVNII
CEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCCEEHHH
TESVQLVSSQQLSGFQKGGLTYFRLEPSITREQSKMDNIAQSNVDSLIDTAANFLSGEGS
HHHHHHHHHHHHCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DIFLDIVNVLKQNT
CHHHHHHHHHHCCC
>Mature Secondary Structure 
SKIIILTVDGGGIKGIIPSYFLSQIEAALNKSCYEMFDIIGGTSTGGIIATALSSPVNN
CEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCC
KLPLTASEIYEIYTNDGSQIFVSQPSIVPDYYSLYYANDGNGNGVEPFLQQKYGNYTLND
CCCCCHHHHEEEEECCCCEEEEECCCCCCCCEEEEEEECCCCCCCCHHHHHHCCCCEECH
AKQNMAALENARTKHVFTTSYTINSSGNSIQNPTLGQDYGPYLFNWYDAANPGDDYQVWE
HHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHH
AARATSAAPTYFPVGKLGGGSAPNSNASERWALDGGVMSNNPAVWAVSEAFRTKLASSLD
HHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCEECCCCCEEEEHHHHHHHHHHCCC
DIILISLGTGSYPSGAGLVTNHQGLPDPDYGNWGFTPWLASDLDDLSGTENGRGAIVNII
CEEEEEECCCCCCCCCCEEECCCCCCCCCCCCCCCCCHHHHCHHHHCCCCCCCCCEEHHH
TESVQLVSSQQLSGFQKGGLTYFRLEPSITREQSKMDNIAQSNVDSLIDTAANFLSGEGS
HHHHHHHHHHHHCCHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
DIFLDIVNVLKQNT
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA