| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300980
Identifier: 146300980
GI number: 146300980
Start: 3854600
End: 3855301
Strand: Reverse
Name: 146300980
Synonym: Fjoh_3235
Alternate gene names: NA
Gene position: 3855301-3854600 (Counterclockwise)
Preceding gene: 146300985
Following gene: 146300978
Centisome position: 63.23
GC content: 32.91
Gene sequence:
>702_bases ATGAAACCAAAAATTAACTACGGAGCAATTGCAGTTTTTTACATCATCGCTGTTATATGCAGATTTATAGCTGTTAAAAC AGATTTATTTAAGGGAGTTGAACATAATGATTATATATTTATTTTAATTCGAGGTCTGGGGCCGGCTCTGGGAGCTTTTG CCGCAATAAAATTATTCTCACTTCAAAATCCAATGTCTTTAAAAGGAATATACAGCAATTATATTCTGCCTTTTGTTGTT TTTTGGCTGCTTCCTGCGCTTTCTATTACAACCTTATATTATTTTATATACGGAAAGTTCCCAATTGTATTTGCTTTTAC CGTTTTAGTTTACGGACTTTTAGAAGAAATTGGCTGGAGAGGATTTTTGCAGGAACAATTAAAAGGGCTTCCAAAGTTTA CTTCAATTGCTATTATTGCTATTCTTTGGTTTGTATGGCATTTAAACCTTAATATGACAACTTCAAACCTAATTTTTCTT GGGGTTATTTTCTTCGGAACCTGGGGAATTGGTAAGATATATTCTAAAACAGGTTCACTTCTTGCCGTTGCGGGAGTTCA TTCGCTGAACAATTTCTTTGTAAAAGAAGGAGTTCACGAACAAGAATTAATGGTAATTCTGGCTCTTTTGGTAATCTGGA TAGGATTTGTAATTGTTTACGACAGTAAATTTAATAAAACCAAACTAGCTTTAAATAACTAA
Upstream 100 bases:
>100_bases ATTCGAAAAAGAATTATTGAGAAGTAATTTCTTACCCAAAGTCAATTTTATTTTTGTTTCCTATTACTAAGTTTGTCTCA ACCTAATCAAAAGATAACTT
Downstream 100 bases:
>100_bases ATACTAGCCATTTTAATATTTTATATTGTATAAAATAGCTCAGCGGAGCAAAATATCTAGCCAGATTTGAATAAATTATG CTATACATATTTTGCTCCGC
Product: abortive infection protein
Products: NA
Alternate protein names: Abortive Infection Protein
Number of amino acids: Translated: 233; Mature: 233
Protein sequence:
>233_residues MKPKINYGAIAVFYIIAVICRFIAVKTDLFKGVEHNDYIFILIRGLGPALGAFAAIKLFSLQNPMSLKGIYSNYILPFVV FWLLPALSITTLYYFIYGKFPIVFAFTVLVYGLLEEIGWRGFLQEQLKGLPKFTSIAIIAILWFVWHLNLNMTTSNLIFL GVIFFGTWGIGKIYSKTGSLLAVAGVHSLNNFFVKEGVHEQELMVILALLVIWIGFVIVYDSKFNKTKLALNN
Sequences:
>Translated_233_residues MKPKINYGAIAVFYIIAVICRFIAVKTDLFKGVEHNDYIFILIRGLGPALGAFAAIKLFSLQNPMSLKGIYSNYILPFVV FWLLPALSITTLYYFIYGKFPIVFAFTVLVYGLLEEIGWRGFLQEQLKGLPKFTSIAIIAILWFVWHLNLNMTTSNLIFL GVIFFGTWGIGKIYSKTGSLLAVAGVHSLNNFFVKEGVHEQELMVILALLVIWIGFVIVYDSKFNKTKLALNN >Mature_233_residues MKPKINYGAIAVFYIIAVICRFIAVKTDLFKGVEHNDYIFILIRGLGPALGAFAAIKLFSLQNPMSLKGIYSNYILPFVV FWLLPALSITTLYYFIYGKFPIVFAFTVLVYGLLEEIGWRGFLQEQLKGLPKFTSIAIIAILWFVWHLNLNMTTSNLIFL GVIFFGTWGIGKIYSKTGSLLAVAGVHSLNNFFVKEGVHEQELMVILALLVIWIGFVIVYDSKFNKTKLALNN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26323; Mature: 26323
Theoretical pI: Translated: 9.92; Mature: 9.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPKINYGAIAVFYIIAVICRFIAVKTDLFKGVEHNDYIFILIRGLGPALGAFAAIKLFS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHH LQNPMSLKGIYSNYILPFVVFWLLPALSITTLYYFIYGKFPIVFAFTVLVYGLLEEIGWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH GFLQEQLKGLPKFTSIAIIAILWFVWHLNLNMTTSNLIFLGVIFFGTWGIGKIYSKTGSL HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCE LAVAGVHSLNNFFVKEGVHEQELMVILALLVIWIGFVIVYDSKFNKTKLALNN EEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC >Mature Secondary Structure MKPKINYGAIAVFYIIAVICRFIAVKTDLFKGVEHNDYIFILIRGLGPALGAFAAIKLFS CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHHHHHHHHH LQNPMSLKGIYSNYILPFVVFWLLPALSITTLYYFIYGKFPIVFAFTVLVYGLLEEIGWR CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCH GFLQEQLKGLPKFTSIAIIAILWFVWHLNLNMTTSNLIFLGVIFFGTWGIGKIYSKTGSL HHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHCCCCE LAVAGVHSLNNFFVKEGVHEQELMVILALLVIWIGFVIVYDSKFNKTKLALNN EEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA