Definition Flavobacterium johnsoniae UW101 chromosome, complete genome.
Accession NC_009441
Length 6,096,872

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The map label for this gene is 146300977

Identifier: 146300977

GI number: 146300977

Start: 3852108

End: 3852941

Strand: Reverse

Name: 146300977

Synonym: Fjoh_3232

Alternate gene names: NA

Gene position: 3852941-3852108 (Counterclockwise)

Preceding gene: 146300978

Following gene: 146300976

Centisome position: 63.2

GC content: 35.37

Gene sequence:

>834_bases
ATGATTCCTCCACTTACTATAATCGCCGCCACAAATTTTTCTTCAATTGCCAACAACGCTGTTACTTATGCCGCTGGACT
TGCTAAAGCAACAGGTGCTAAACTTATTTTGTTTAATTCATTTTCTTTGAGTGTTCACAGCGCTAATTCTTTAATTACTG
CCGAATCAATGCAGAAACAAATGGATAAAGCAGCACTGAGACTTCAGACTTTTGGAGCAGAAATCGCAGGTTTGTTTAAA
ATTTCGGTAGAAAGCATCTGCAGTTATTCTTTTCTGGAAGACGAACTTCCTTCGATCATTACACAAACGAATGCTAATCT
AGTGGTTATGGGAATGGCAGAACGTTCTCTGGAACAGGATTTAATGGGAAATTCGACTACAGCAGTTATAAAAAACCTGA
ATATTCCGGTTTTGGCTGTGCCGCAGAATGCACGTTTTCTAAATGCTAAAAAAATCCTGTATGCCTGTGATACGCTGAGT
TTATCTTCTATAAAAAGATTTACCTGGATTAGACGCGTGATTGGAAATTTAGGTTCTGAAATTGAATTTTTCAGCGTTGA
TGAAAAACTGGACGAAATTAAAGAGGAGCAGGGAAAAGTTTTACTGAATTCTTCGATTGAAAAAGAGTTTGAAGACGTAA
AATATATTTACAAAAACGTACGTTCAAATGCGGTAATCAATGAGATAAGAAAAGAAATCAAAAATTTTGAAGCTGATATT
TTAGTAATGGTTCCTCAAAAATATGGTTTTTGGGATTCATTAGTTCATAAAAGTAAAACCAGAATCATGGCAGCAGGTTT
AGATATTCCGTTACTATCTATTCCGAAGAATTAA

Upstream 100 bases:

>100_bases
TTACGGTTGAGACCTAAAAAATGATTATTCAGTAACTTTAAAATAAACTGAAAAGATTAATTGGGCATTTTTACAATTAA
AATGTTTAATAGATATATTT

Downstream 100 bases:

>100_bases
GGGAAAAAATAAAAACACCTTTAAGATTGTGCGGTAAGATTTTTTGGAAATTTATGCTTTTTTATATTAATTGTTTGTTA
ATTATTGAAAATCCGACCCT

Product: UspA domain-containing protein

Products: NA

Alternate protein names: UspA Domain-Containing Protein; Uspa DomaiN-Containing Protein; Universal Stress Protein UspA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MIPPLTIIAATNFSSIANNAVTYAAGLAKATGAKLILFNSFSLSVHSANSLITAESMQKQMDKAALRLQTFGAEIAGLFK
ISVESICSYSFLEDELPSIITQTNANLVVMGMAERSLEQDLMGNSTTAVIKNLNIPVLAVPQNARFLNAKKILYACDTLS
LSSIKRFTWIRRVIGNLGSEIEFFSVDEKLDEIKEEQGKVLLNSSIEKEFEDVKYIYKNVRSNAVINEIRKEIKNFEADI
LVMVPQKYGFWDSLVHKSKTRIMAAGLDIPLLSIPKN

Sequences:

>Translated_277_residues
MIPPLTIIAATNFSSIANNAVTYAAGLAKATGAKLILFNSFSLSVHSANSLITAESMQKQMDKAALRLQTFGAEIAGLFK
ISVESICSYSFLEDELPSIITQTNANLVVMGMAERSLEQDLMGNSTTAVIKNLNIPVLAVPQNARFLNAKKILYACDTLS
LSSIKRFTWIRRVIGNLGSEIEFFSVDEKLDEIKEEQGKVLLNSSIEKEFEDVKYIYKNVRSNAVINEIRKEIKNFEADI
LVMVPQKYGFWDSLVHKSKTRIMAAGLDIPLLSIPKN
>Mature_277_residues
MIPPLTIIAATNFSSIANNAVTYAAGLAKATGAKLILFNSFSLSVHSANSLITAESMQKQMDKAALRLQTFGAEIAGLFK
ISVESICSYSFLEDELPSIITQTNANLVVMGMAERSLEQDLMGNSTTAVIKNLNIPVLAVPQNARFLNAKKILYACDTLS
LSSIKRFTWIRRVIGNLGSEIEFFSVDEKLDEIKEEQGKVLLNSSIEKEFEDVKYIYKNVRSNAVINEIRKEIKNFEADI
LVMVPQKYGFWDSLVHKSKTRIMAAGLDIPLLSIPKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30674; Mature: 30674

Theoretical pI: Translated: 8.18; Mature: 8.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPPLTIIAATNFSSIANNAVTYAAGLAKATGAKLILFNSFSLSVHSANSLITAESMQKQ
CCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEEEHHHHHHH
MDKAALRLQTFGAEIAGLFKISVESICSYSFLEDELPSIITQTNANLVVMGMAERSLEQD
HHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
LMGNSTTAVIKNLNIPVLAVPQNARFLNAKKILYACDTLSLSSIKRFTWIRRVIGNLGSE
HCCCCHHHHEEECCCCEEEECCCCCEECHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
IEFFSVDEKLDEIKEEQGKVLLNSSIEKEFEDVKYIYKNVRSNAVINEIRKEIKNFEADI
EEEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCE
LVMVPQKYGFWDSLVHKSKTRIMAAGLDIPLLSIPKN
EEEECCCCCHHHHHHHHHHHEEEEECCCCCEEECCCC
>Mature Secondary Structure
MIPPLTIIAATNFSSIANNAVTYAAGLAKATGAKLILFNSFSLSVHSANSLITAESMQKQ
CCCCEEEEEECCHHHHHCCHHHHHHHHHHCCCCEEEEEEEEEEEEECCCCEEEHHHHHHH
MDKAALRLQTFGAEIAGLFKISVESICSYSFLEDELPSIITQTNANLVVMGMAERSLEQD
HHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHHCCCCCEEEEECHHHHHHHH
LMGNSTTAVIKNLNIPVLAVPQNARFLNAKKILYACDTLSLSSIKRFTWIRRVIGNLGSE
HCCCCHHHHEEECCCCEEEECCCCCEECHHEEEEEECCCCHHHHHHHHHHHHHHHHCCCC
IEFFSVDEKLDEIKEEQGKVLLNSSIEKEFEDVKYIYKNVRSNAVINEIRKEIKNFEADI
EEEEEHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCCE
LVMVPQKYGFWDSLVHKSKTRIMAAGLDIPLLSIPKN
EEEECCCCCHHHHHHHHHHHEEEEECCCCCEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA