| Definition | Flavobacterium johnsoniae UW101 chromosome, complete genome. |
|---|---|
| Accession | NC_009441 |
| Length | 6,096,872 |
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The map label for this gene is 146300955
Identifier: 146300955
GI number: 146300955
Start: 3827216
End: 3829234
Strand: Reverse
Name: 146300955
Synonym: Fjoh_3210
Alternate gene names: NA
Gene position: 3829234-3827216 (Counterclockwise)
Preceding gene: 146300956
Following gene: 146300953
Centisome position: 62.81
GC content: 33.33
Gene sequence:
>2019_bases ATGATACCATATATCTTATACACCGCGCTTATTCTTTCGGCTTGTTTTTTGTTTTACAAACTGCTGCTGCAAAAAGAAAC CTTTTTTCATTTGAACAGATATGTACTGCTTTTTTGTATGGTATTGGCATTTACACTGCCTTTAATTCCGGTACCGCAGC AATTATCATTTAGAAAAAATGCAGTAGAACAGTCTATTGAGGCTGCAAAAATTCCAACAGGAACTGCTGCTGCTCAAACA TCAAAAGAAAAATCTATTGAGTCTGTACCTGTTGAGGAGACAAAACAAGTAATCAATGTTGATGTCTTACTGCAGGGTAT AATTTATTTATACTGGTTTGGCGTGGTAATATTTGGTCTTAATTTTTTAATGCAGGCCGTTATATTGCTTTTTAAATCCT ATTCAGGATCTGTAATTCAGGATGGAAAATTTCGTATTGTTGAAATAACAGGCGATAAAGCGCCGTGTTCTTTTGGTAAT AACATTTTTATCAATCCTGAAAAGTACGAATGGGAAACCTACAACCAAATTCTGCTTCACGAAAAAATCCATATTGAACA GAAACATACCATAGATCTTCTGCTTGCAGAAGTTGTTTTGGTTTTTCAATGGTTTAATCCGTTTGCCTGGCAGTGGCGAA AAGCACTCGAAACTAATCTTGAATTTTTAACCGATGATCAAATGCTGCAGCACGATACGGTTGAAAGAGAGAGTTATCAG TTTAGTCTGTTAAAAGTAGCTGCGCCGCAATTTCCTTTGAGTCTTACAACTAACTATAATCAATCATTATTAAAAAAACG AATCATCATGATGAACTCAAAAAAATCAAATGTGCACACCACATGGAAATATTTTTTCCTTGTGCCGCTAATGGTGCTTT TTGCCTGCCTTTTTAATCAACCGGCAGCGCAGAGCCAGCCTTTAAATTCAAAAGGCGAATCGAAACAAAATGTTATCGTT GAAGATGAAATGAAAACCGATGGAAACTGGTTTGCCGTTATAAAAGGCGATTCTATTGAAATCAGCTTTAAAAGCGATGA ACATAGCAATTCTTCGCATACTTTTCAATTACGTGAATTAAGCAGTATTCCGAGAGATAAACAAGGCGATTTTACTTTGA CTCGTGAAGTCGGAACTATGAATTTTAACGGGAAATTTGAAGGCAATAAAGGAATGGGAACTTATAAATTCACTGCAAAT AAAGATTACAGCACTGCTATGAACAAAGAGGGATTAGATATTAAAAAAGATAATGATCTAATGGTGTTCTTTTTAATTAA TATCAAAGTCTCTTATGTGCAGATGCTTAAGAAAAACGGCTTTAATAATTTAGATAATCAGGTTATTCCGCTTGCAGCTT TAGATGTAAATGAAGCTTATATAACTTCAATCAAAAAAGCTATTCCGGATATTGATTTAGAAAATCTTGTTCCTTTTAAA TCATTAGGAATAGACAAAGCTTTTATTGAAGAAATTCGCAGTTCAGGTTACAAAAATGTTAGCCCAAGTAATATTATTGC CTTAAAATCTCAGGGTATTGACGGAAAATATATCAATGATTTCCGAAGTTCAGGTAAAAAAAGCGATAACGTTGAAAATA ACAACAGAAACAATAATGATGACAACGACGATGACGATATCATTGCTTTTAAAGCATTAAACGTTGATAAGGCATTTATT GATTCTTTTAAAGCATTAGGATATAATAACCTTTCAAACGGTGATCTTATTGGTTTTAAATCATTAAATGTAACTCCAGA ATACGTTAAAAGTTTTCAAAATGCCGGTTATAAAAACATTTCAGCAGAAAATCTAATGGCTTTAAAATCTCAGAATATTT CACCAGATTTAGTAAAAGAATACAAAAGTCTAGGGTTTGATAATCTTGATCTCGAAGAAATTGTGGGAGCAAAAGCAATT GGTACAACTCCGGCTTATATTAAATCGATGCGTGCAAAAGGACATGATTTTAAAAGCCTTGAAAAATATATTGCTTTAAA ATCGCTGGCTAATAATTAA
Upstream 100 bases:
>100_bases ATAACTCATATCCGAGAATGTTAGCTTTTTTTGCAAAAGAACAAAAACTTTCAGATAAGGAATTAGATGAAATCGTGAGC ATCATTAAAAAAGAAAAAAT
Downstream 100 bases:
>100_bases TTATTTGAATCAGCTTTAAAAATACCTCAGTTGTAAGACTAAAAAAGCCCAAACCTAAACAGGAATGGGCTTTGTTGTAT AATGAGTTTTCTATATTTCT
Product: peptidase M56, BlaR1
Products: NA
Alternate protein names: NB Family Protein; BlaR1 Peptidase M; BlaR1 Peptidase; Peptidase M; Transcriptional Regulator; Conserved Transporter; Nb Family Protein; Antirepressor; NB Protein; Nb Domain/Peptidase
Number of amino acids: Translated: 672; Mature: 672
Protein sequence:
>672_residues MIPYILYTALILSACFLFYKLLLQKETFFHLNRYVLLFCMVLAFTLPLIPVPQQLSFRKNAVEQSIEAAKIPTGTAAAQT SKEKSIESVPVEETKQVINVDVLLQGIIYLYWFGVVIFGLNFLMQAVILLFKSYSGSVIQDGKFRIVEITGDKAPCSFGN NIFINPEKYEWETYNQILLHEKIHIEQKHTIDLLLAEVVLVFQWFNPFAWQWRKALETNLEFLTDDQMLQHDTVERESYQ FSLLKVAAPQFPLSLTTNYNQSLLKKRIIMMNSKKSNVHTTWKYFFLVPLMVLFACLFNQPAAQSQPLNSKGESKQNVIV EDEMKTDGNWFAVIKGDSIEISFKSDEHSNSSHTFQLRELSSIPRDKQGDFTLTREVGTMNFNGKFEGNKGMGTYKFTAN KDYSTAMNKEGLDIKKDNDLMVFFLINIKVSYVQMLKKNGFNNLDNQVIPLAALDVNEAYITSIKKAIPDIDLENLVPFK SLGIDKAFIEEIRSSGYKNVSPSNIIALKSQGIDGKYINDFRSSGKKSDNVENNNRNNNDDNDDDDIIAFKALNVDKAFI DSFKALGYNNLSNGDLIGFKSLNVTPEYVKSFQNAGYKNISAENLMALKSQNISPDLVKEYKSLGFDNLDLEEIVGAKAI GTTPAYIKSMRAKGHDFKSLEKYIALKSLANN
Sequences:
>Translated_672_residues MIPYILYTALILSACFLFYKLLLQKETFFHLNRYVLLFCMVLAFTLPLIPVPQQLSFRKNAVEQSIEAAKIPTGTAAAQT SKEKSIESVPVEETKQVINVDVLLQGIIYLYWFGVVIFGLNFLMQAVILLFKSYSGSVIQDGKFRIVEITGDKAPCSFGN NIFINPEKYEWETYNQILLHEKIHIEQKHTIDLLLAEVVLVFQWFNPFAWQWRKALETNLEFLTDDQMLQHDTVERESYQ FSLLKVAAPQFPLSLTTNYNQSLLKKRIIMMNSKKSNVHTTWKYFFLVPLMVLFACLFNQPAAQSQPLNSKGESKQNVIV EDEMKTDGNWFAVIKGDSIEISFKSDEHSNSSHTFQLRELSSIPRDKQGDFTLTREVGTMNFNGKFEGNKGMGTYKFTAN KDYSTAMNKEGLDIKKDNDLMVFFLINIKVSYVQMLKKNGFNNLDNQVIPLAALDVNEAYITSIKKAIPDIDLENLVPFK SLGIDKAFIEEIRSSGYKNVSPSNIIALKSQGIDGKYINDFRSSGKKSDNVENNNRNNNDDNDDDDIIAFKALNVDKAFI DSFKALGYNNLSNGDLIGFKSLNVTPEYVKSFQNAGYKNISAENLMALKSQNISPDLVKEYKSLGFDNLDLEEIVGAKAI GTTPAYIKSMRAKGHDFKSLEKYIALKSLANN >Mature_672_residues MIPYILYTALILSACFLFYKLLLQKETFFHLNRYVLLFCMVLAFTLPLIPVPQQLSFRKNAVEQSIEAAKIPTGTAAAQT SKEKSIESVPVEETKQVINVDVLLQGIIYLYWFGVVIFGLNFLMQAVILLFKSYSGSVIQDGKFRIVEITGDKAPCSFGN NIFINPEKYEWETYNQILLHEKIHIEQKHTIDLLLAEVVLVFQWFNPFAWQWRKALETNLEFLTDDQMLQHDTVERESYQ FSLLKVAAPQFPLSLTTNYNQSLLKKRIIMMNSKKSNVHTTWKYFFLVPLMVLFACLFNQPAAQSQPLNSKGESKQNVIV EDEMKTDGNWFAVIKGDSIEISFKSDEHSNSSHTFQLRELSSIPRDKQGDFTLTREVGTMNFNGKFEGNKGMGTYKFTAN KDYSTAMNKEGLDIKKDNDLMVFFLINIKVSYVQMLKKNGFNNLDNQVIPLAALDVNEAYITSIKKAIPDIDLENLVPFK SLGIDKAFIEEIRSSGYKNVSPSNIIALKSQGIDGKYINDFRSSGKKSDNVENNNRNNNDDNDDDDIIAFKALNVDKAFI DSFKALGYNNLSNGDLIGFKSLNVTPEYVKSFQNAGYKNISAENLMALKSQNISPDLVKEYKSLGFDNLDLEEIVGAKAI GTTPAYIKSMRAKGHDFKSLEKYIALKSLANN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76268; Mature: 76268
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIPYILYTALILSACFLFYKLLLQKETFFHLNRYVLLFCMVLAFTLPLIPVPQQLSFRKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AVEQSIEAAKIPTGTAAAQTSKEKSIESVPVEETKQVINVDVLLQGIIYLYWFGVVIFGL HHHHHHHHHCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFLMQAVILLFKSYSGSVIQDGKFRIVEITGDKAPCSFGNNIFINPEKYEWETYNQILLH HHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHH EKIHIEQKHTIDLLLAEVVLVFQWFNPFAWQWRKALETNLEFLTDDQMLQHDTVERESYQ HHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCHH FSLLKVAAPQFPLSLTTNYNQSLLKKRIIMMNSKKSNVHTTWKYFFLVPLMVLFACLFNQ EEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC PAAQSQPLNSKGESKQNVIVEDEMKTDGNWFAVIKGDSIEISFKSDEHSNSSHTFQLREL CCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEEHHH SSIPRDKQGDFTLTREVGTMNFNGKFEGNKGMGTYKFTANKDYSTAMNKEGLDIKKDNDL HCCCCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEECCCCHHHHCCCCCCCEECCCCE MVFFLINIKVSYVQMLKKNGFNNLDNQVIPLAALDVNEAYITSIKKAIPDIDLENLVPFK EEEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHCCCHH SLGIDKAFIEEIRSSGYKNVSPSNIIALKSQGIDGKYINDFRSSGKKSDNVENNNRNNND HCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC DNDDDDIIAFKALNVDKAFIDSFKALGYNNLSNGDLIGFKSLNVTPEYVKSFQNAGYKNI CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCC SAENLMALKSQNISPDLVKEYKSLGFDNLDLEEIVGAKAIGTTPAYIKSMRAKGHDFKSL CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCHHCCCCHHHHHHHHHCCCCHHHH EKYIALKSLANN HHHHHHHHHCCC >Mature Secondary Structure MIPYILYTALILSACFLFYKLLLQKETFFHLNRYVLLFCMVLAFTLPLIPVPQQLSFRKN CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AVEQSIEAAKIPTGTAAAQTSKEKSIESVPVEETKQVINVDVLLQGIIYLYWFGVVIFGL HHHHHHHHHCCCCCCHHHHCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NFLMQAVILLFKSYSGSVIQDGKFRIVEITGDKAPCSFGNNIFINPEKYEWETYNQILLH HHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCCCCCCCEEEECCCCCCHHHHHHHHHH EKIHIEQKHTIDLLLAEVVLVFQWFNPFAWQWRKALETNLEFLTDDQMLQHDTVERESYQ HHHCCCCHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCCHHCCCCHHHHHHHHCCCCHH FSLLKVAAPQFPLSLTTNYNQSLLKKRIIMMNSKKSNVHTTWKYFFLVPLMVLFACLFNQ EEEEEECCCCCCEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCCC PAAQSQPLNSKGESKQNVIVEDEMKTDGNWFAVIKGDSIEISFKSDEHSNSSHTFQLREL CCCCCCCCCCCCCCCCCEEEECCCCCCCCEEEEEECCEEEEEECCCCCCCCCCEEEEHHH SSIPRDKQGDFTLTREVGTMNFNGKFEGNKGMGTYKFTANKDYSTAMNKEGLDIKKDNDL HCCCCCCCCCEEEEEECCCCCCCCEECCCCCCEEEEEECCCCHHHHCCCCCCCEECCCCE MVFFLINIKVSYVQMLKKNGFNNLDNQVIPLAALDVNEAYITSIKKAIPDIDLENLVPFK EEEEEEEHHHHHHHHHHHCCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCHHHCCCHH SLGIDKAFIEEIRSSGYKNVSPSNIIALKSQGIDGKYINDFRSSGKKSDNVENNNRNNND HCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCCCCCCC DNDDDDIIAFKALNVDKAFIDSFKALGYNNLSNGDLIGFKSLNVTPEYVKSFQNAGYKNI CCCCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHCCCCCC SAENLMALKSQNISPDLVKEYKSLGFDNLDLEEIVGAKAIGTTPAYIKSMRAKGHDFKSL CHHHHHHHHCCCCCHHHHHHHHHCCCCCCCHHHHHCCHHCCCCHHHHHHHHHCCCCHHHH EKYIALKSLANN HHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA